These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2675 fasta sequence [CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCTGCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTACCTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA] [+] EMBL AK068740 [CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCTGCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGT ] [+] EMBL AK099937 [ GCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGGCATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACT ] [+] EMBL CB638277 [ CTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAAGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCANAGTAACGGTAGTG ] [+] EMBL CB634408 [ GGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAACTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTATCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCGGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCT ] [+] EMBL CB633959 [ GGGCGCGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAACTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTATCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCGGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTC ] [-] EMBL CB633960 [ ATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAA ] [-] EMBL CB634409 [ TCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCGTTTGCGTTATATCCAATTTAA ] [+] EMBL AK071312 [ ACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTACCTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA] consensusID : consensus_12527#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 604 fasta sequence [TTTGGCATATAGTTCAGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGC] [-] EMBL CB638278 [TTTGGCATATAGTTCAGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGC] consensusID : consensus_12527#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence [TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTTTTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATGTTCTAACAAGGCATTGTTTGTTCACCCGCCTATGTTTTTCTTAACTAACAANANGCTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGANCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANACAGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTATATGGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAATCATTCAATAAAAA] [+] EMBL AA753335 [TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTTTTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATGTTCTAACAAGGCATTGTTTGTTCACCCGCCTATGTTTTTCTTAACTAACAANANGCTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGANCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANACAGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTATATGGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAATCATTCAATAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12527#0 CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCT 60 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTT 120 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCC 180 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGC 240 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGC 300 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAG 360 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGG 420 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTG 480 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCA 540 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGA 600 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGG 660 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 AGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTA 720 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAG 780 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAG 840 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGG 900 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 AAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGT 960 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCG 1020 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGC 1080 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGG 1140 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAA 1200 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGA 1260 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTA 1320 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACT 1380 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 ACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTC 1440 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 AGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTT 1500 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 AGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGC 1560 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCAC 1620 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 ATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAA 1680 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 ATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTT 1740 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAG 1800 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 ATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCG 1860 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 CATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTA 1920 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAA 1980 consensus_12527#1 ----------TTTGG--CATATAGTT-CAGGTACTGGTTGTATGCTGCTATCAGATGCAA 47 consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 ATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGA 2040 consensus_12527#1 ATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGA 107 consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGT 2100 consensus_12527#1 TTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGT 167 consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 TACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTG 2160 consensus_12527#1 TACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTG 227 consensus_12527#2 ------------------------------------------------------------ consensus_12527#0 GCATATCCCTGTTGTCTCTGAGGA-AGGTTCACTAGAGAAGGACCGGACCTGGTTATGTG 2219 consensus_12527#1 GCATATCCCTGTTGTCTCTGAGGA-AGGTTCACTAGAGAAGGACCGGACCTGGTTATGTG 286 consensus_12527#2 ------------TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTT 48 *** * * * * ** * ** * * ** *** consensus_12527#0 TCACGCGGCGCAACTGAGAGCCAGATTACAATGAA--GCTCAAGTTGATCTAGAAACACA 2277 consensus_12527#1 TCACGCGGCGCAACTGAGAGCCAGATTACAATGAA--GCTCAAGTTGATCTAGAAACACA 344 consensus_12527#2 TTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATG 108 * * * ** * * ** * ** * * * * * *** ****** consensus_12527#0 ATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCT 2337 consensus_12527#1 ATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCT 404 consensus_12527#2 TTCT-AACAAGGCATTGTTTGTTCACCCGCCTATGTTTTT----CTTAACTAACAANANG 163 * * ** ** ** * * * * * * * * * * ** * consensus_12527#0 TTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 2397 consensus_12527#1 TTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 464 consensus_12527#2 CTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 223 * * **************************************************** consensus_12527#0 TCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCC 2457 consensus_12527#1 TCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCC 524 consensus_12527#2 TCTTTCATGCTTGGA--NCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANAC 281 *************** ******** ****** *** ******************* * consensus_12527#0 AGAATAGGTGAATAACACGTGCAGAAAAA-TAGGCCTGACTGCTCAACATTCAGCTACTA 2516 consensus_12527#1 AGAATAGGTGAATAACACGTGCAGAAAAA-TAGGCCTGACTGCTCAACATTCAGCTACTA 583 consensus_12527#2 AGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTA 341 ****** ******* ************** ** **** ********************** consensus_12527#0 TATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAAT 2576 consensus_12527#1 TATATGGCTATACAAATATGC--------------------------------------- 604 consensus_12527#2 TAT--GGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAAT 399 *** **************** consensus_12527#0 CATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTAC 2636 consensus_12527#1 ------------------------------------------------------------ consensus_12527#2 CATTCAATAAAAA----------------------------------------------- 412 consensus_12527#0 CTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA 2675 consensus_12527#1 --------------------------------------- consensus_12527#2 --------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||