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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2675 fasta sequence
[CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCTGCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTACCTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA]
[+] EMBL AK068740 [CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCTGCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGT ]
[+] EMBL AK099937 [ GCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCAGAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAGCTGAGAGTCGAGCTGGGCATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGGTATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAATGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGAGCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTATTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACTACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTCAGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTTAGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGCTTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCACATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAAATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTTTAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACT ]
[+] EMBL CB638277 [ CTCTTCGTTCCTCCTCCTCATCTCCTCTTCCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCCGCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGCCGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGCCACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAAGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCANAGTAACGGTAGTG ]
[+] EMBL CB634408 [ GGGCGGGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAACTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTATCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCGGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTCCATGGGCAACGGTGACATGGCCT ]
[+] EMBL CB633959 [ GGGCGCGGCCGTCATGGCGGCGGCGCGAGGCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGGGGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTGGACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGAGGCCAGAGTAACGCTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGAGAACGAAGTCAAACTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGGAGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTACAGCGTGCTCCTTTATCTGTGTTCTTCCGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAGTGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAGCGTGGGAAATTTGGAGGGAGACGATGTACAATCGGAAGGCCACTCTGAAGATCAGGAGGGAAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGTGAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCGCTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGCGATGTC ]
[-] EMBL CB633960 [ ATTGTTGCTGATGTTATACGGCAAAGATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAA ]
[-] EMBL CB634409 [ TCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCGCATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTATGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCGTTTGCGTTATATCCAATTTAA ]
[+] EMBL AK071312 [ ACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAATCATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTACCTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA]
consensusID : consensus_12527#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 604 fasta sequence
[TTTGGCATATAGTTCAGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGC]
[-] EMBL CB638278 [TTTGGCATATAGTTCAGGTACTGGTTGTATGCTGCTATCAGATGCAAATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGATTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGTTACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTGGCATATCCCTGTTGTCTCTGAGGAAGGTTCACTAGAGAAGGACCGGACCTGGTTATGTGTCACGCGGCGCAACTGAGAGCCAGATTACAATGAAGCTCAAGTTGATCTAGAAACACAATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCTTTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCCAGAATAGGTGAATAACACGTGCAGAAAAATAGGCCTGACTGCTCAACATTCAGCTACTATATATGGCTATACAAATATGC]
consensusID : consensus_12527#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 412 fasta sequence
[TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTTTTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATGTTCTAACAAGGCATTGTTTGTTCACCCGCCTATGTTTTTCTTAACTAACAANANGCTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGANCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANACAGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTATATGGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAATCATTCAATAAAAA]
[+] EMBL AA753335 [TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTTTTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATGTTCTAACAAGGCATTGTTTGTTCACCCGCCTATGTTTTTCTTAACTAACAANANGCTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAATTCTTTCATGCTTGGANCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANACAGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTATATGGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAATCATTCAATAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12527#0 CAGAACCTTATCCTGTTCGCTCCTGACCTTCGTTAAAACCTCACCCGCTGCTCTCCCGCT 60
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GCGATGGCAGCGCGCCATGGCCATGGCGCCCCTCTTCGTTCCTCCTCCTCATCTCCTCTT 120
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CCTCCTCCCAGCCACCACCTCATCATCCCCCGCTGCTTCCCTCAGGCGACTCCTCCTCCC 180
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GCCGCTCTCGTGCCACGCGCGCCAGGTGCTCGACGTAATGCCCCAGGGAGACCGCGTCGC 240
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CGGCCCGAGAGCCGCCGAGGGAGCTGGCGCTAAAGGCGCGACGGCGCAGGTCGGCGTGGC 300
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CACACGGGAGGCCGGCACGGCGGGGCGGCATGGGCGGGGCCGTCATGGCGGCGGCGCGAG 360
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GCCGTGGAGGAGAGGGGAGGACAGGCCCGCGCGCGGAGGACAACATGCCGCCGACGACGG 420
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GGAGGTTCAGGGAACGAGGAGGGGTGGGGATCTCAAACAACGCAGGGAGGGCAGGCGCTG 480
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GACGAGAGGCGAAACGCAAGCGCGGGAATCTGGAAAGGCTGGAAATTCGGGGAGATGCCA 540
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GAGTAACGGTAGTGGTGGCAATGCCAGCAGGAAGGGGAAGAAGAAAGCCAAGGGTGGTGA 600
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GAACGAAGTCAAGCTGAGAGTCGAGCTGGACATGTGCTCGAAGAGGGGAGACGTGATTGG 660
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 AGCCATCAACCTGTATGATTCTGCGGTGAAGGAAGGGATCAAAATGGGGCAGCATCACTA 720
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CAGCGTGCTCCTTTACCTGTGTTCTTCTGCGGCGCTTGGGTTTGTGCAACCGGCGAAAAG 780
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TGGCAATGCCGGTAGTGGGATTGCTAGTATTGGGCAGTTACATTCATCGTCTACTCAAAG 840
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CGTGGGAAATTTGGAGGGAGACGATGTACAATCTGAAGGCCACTCTGAAGATCAGGAGGG 900
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 AAACAAGACCGATTTGTTTGCTTCGGATGATGGGACGGAGAAACCGAGTCGAATTCCAGT 960
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GAGTGATGAGCTGAGGGAGTATGCAAGAACTCGAGGGTTTGAGATATTTGAGAAGATGCG 1020
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CTCGGAGGAAGAGAAAGTTCCCATGAATGAGTCTGCTCTGACTGCAGTGGCTCGTATGGC 1080
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GATGTCCATGGGCAACGGTGACATGGCCTTTGATGTTGTGAAGCAAATGAAGGATCAAGG 1140
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TATTGCGCCAAAGTTGCGGTCATATGGTCCTGCTTTGACGGCATTCTGCAATAGCGGCAA 1200
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TGTTGAGAAAGCATTTGAGGTGGAAGCACATATGTTGGAGTCTGGTGTCAGACCTGAAGA 1260
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GCCTGAGTTGGAGACACTTCTCAAGGCTAGTGTGGCCGCACAACAAGGAGACAAGGTTTA 1320
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TTATTTGTTGCATAAGTTCAGGACTACTGTCAGACAAGCATCTTCAACCACAGCTAAACT 1380
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 ACTTGAGGATTGGTTTCAGAGCCCAACAGCATCTAAAGTGGGGAAGAGAAAATGGGATTC 1440
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 AGGTGCTATAACAAAAGCTATTGAGAACAATGGTGGGGGTTGGCATGGGTTAGGATGGTT 1500
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 AGGAAGGGGGAAATGGACCATATCACACTCGCACATCGACAGGAATGGTGCATGCCTTGC 1560
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TTGTGGAGAAAAATTGACTATTATAGATCTTGATCCAAAAGAAACAGAAGATTTTGCCAC 1620
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 ATTGGTGGCAAAATTAGCTATCAAAAGAGAGAGGAGATCAAACTTTGATAACTTTCAGAA 1680
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 ATGGTTGGAAAAGCATGGCCCTTTTGATGCAGTTGTGGATGGTGCCAACGTTGGCCTTTT 1740
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TAGCCATAAGCATATTTCCTTGAGTAAGATTAATATTGTTGCTGATGTTATACGGCAAAG 1800
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 ATTTCAATCAAGAAAGCTCCCTTTGATAGTTGTGCATAACCGACATCTCACTGGAGAGCG 1860
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 CATGCAAAAGCCTTCTAATCGTAAGTTGGTGGAAAAGTGGAAGCTTTCTAATGCTATTTA 1920
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TGCAACCCCTACTGGCTCAAATGATGATTGGTACTGGTTGTATGCTGCTATCAGATGCAA 1980
consensus_12527#1 ----------TTTGG--CATATAGTT-CAGGTACTGGTTGTATGCTGCTATCAGATGCAA 47
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 ATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGA 2040
consensus_12527#1 ATGCTTGATGGTTACCAATGATGAAATGAGAGACCACACATTTCAGCTCTTGGAAAGAGA 107
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGT 2100
consensus_12527#1 TTTCTTCCCCAAATGGAAGGAAAGGCATCAGGTACGCTTCAATTTTGAGGACAGTTGTGT 167
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 TACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTG 2160
consensus_12527#1 TACACTTCAAATGCCTCCTCCTTGCTCAGTTGTAATTCAGGAATCTGAGAATGGTCAGTG 227
consensus_12527#2 ------------------------------------------------------------
consensus_12527#0 GCATATCCCTGTTGTCTCTGAGGA-AGGTTCACTAGAGAAGGACCGGACCTGGTTATGTG 2219
consensus_12527#1 GCATATCCCTGTTGTCTCTGAGGA-AGGTTCACTAGAGAAGGACCGGACCTGGTTATGTG 286
consensus_12527#2 ------------TGTATANAGTTATATGAACATAACAGCTCTGTCATGTCATGTCGTGTT 48
*** * * * * ** * ** * * ** ***
consensus_12527#0 TCACGCGGCGCAACTGAGAGCCAGATTACAATGAA--GCTCAAGTTGATCTAGAAACACA 2277
consensus_12527#1 TCACGCGGCGCAACTGAGAGCCAGATTACAATGAA--GCTCAAGTTGATCTAGAAACACA 344
consensus_12527#2 TTGGGAGTTAGTCCTAAATTCTTGAATCCATTTAGCGGACTACCTGTTTCTTGAAACATG 108
* * * ** * * ** * ** * * * * * *** ******
consensus_12527#0 ATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCT 2337
consensus_12527#1 ATGTGAATAAATCACTACAACATGGTTTGACATTACTGTAGGGACAAAGTTGACCATTCT 404
consensus_12527#2 TTCT-AACAAGGCATTGTTTGTTCACCCGCCTATGTTTTT----CTTAACTAACAANANG 163
* * ** ** ** * * * * * * * * * * ** *
consensus_12527#0 TTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 2397
consensus_12527#1 TTTCTGCTCAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 464
consensus_12527#2 CTCTTCTACAGGATCAAGAACTGACCGTACCTTGTCAAGGTGCCGTTACATACCAACAAT 223
* * ****************************************************
consensus_12527#0 TCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCC 2457
consensus_12527#1 TCTTTCATGCTTGGAGTTCCTTCTTCTGTTAAACTGGCCTGTTTCAGGTGTTCAGTAGCC 524
consensus_12527#2 TCTTTCATGCTTGGA--NCCTTCTTCCGTTAAATTGGTCTGTTTCAGGTGTTCAGTANAC 281
*************** ******** ****** *** ******************* *
consensus_12527#0 AGAATAGGTGAATAACACGTGCAGAAAAA-TAGGCCTGACTGCTCAACATTCAGCTACTA 2516
consensus_12527#1 AGAATAGGTGAATAACACGTGCAGAAAAA-TAGGCCTGACTGCTCAACATTCAGCTACTA 583
consensus_12527#2 AGAATANGTGAATAGCACGTGCAGAAAAAGTAAGCCTAACTGCTCAACATTCAGCTACTA 341
****** ******* ************** ** **** **********************
consensus_12527#0 TATATGGCTATACAAATATGCATTTGGTCTTCCGGTCCTTTGCGTTATATCCAATTTAAT 2576
consensus_12527#1 TATATGGCTATACAAATATGC--------------------------------------- 604
consensus_12527#2 TAT--GGCTATACAAATATGCAATTGGTCTTCCTGTCCTTTGCGTTCTATCCAATTTAAT 399
*** ****************
consensus_12527#0 CATTCAATAAGGCATTGTGTGTACTGTTATGTGCATGAAGTTAGAACTCTGAACTTGTAC 2636
consensus_12527#1 ------------------------------------------------------------
consensus_12527#2 CATTCAATAAAAA----------------------------------------------- 412
consensus_12527#0 CTTTTTTACACTCTACCCTGAACAAGTGAACATTGAACA 2675
consensus_12527#1 ---------------------------------------
consensus_12527#2 ---------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||