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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12534#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2292 fasta sequence
[GACCACCGCCGCGCCGCTCGCCGCCTCCGCCACCGCCTCCGCCGGCAAACCACCCCCTCGCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGGCGCGCTCCTCAGCGGCGGCGGCCCCCACGCCGCCGCGTGCGGCGGCGCCGCCTTCCTCCGCGACTACGCGGAGCGGGGCACCAACGCGCTGCTGTGGGCGGCCCTCCTCGCCGTCACGTGGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCCCGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACCGGCTACCTATCGAAGTTACATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTAATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTGCCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCCTGGATGAAAAACTTAGTGTTGGTACTGGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAGTTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCTTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCTTCTTATGCAGTTCCCCCATTTTGGAAACCTGATTATAGGAGGTACAGAACACTATGTGCTCGATTGAAGCTATTAACACAAGGCATCGTTGCAAAATCAAGAAACCAAAATGGTGTACTTAGCCTTATTGATCTGAGTTCCTGTCAGAGAAGTGAAAGGATGATAAAAGATCCATGCAGAGGCTTTTCTCTGCTTGATGGTGTGATTTCAAGTCGTTGTCTCAACGAGGCAGCTGAAGGGCCTCTCAGCTCAGAAGAAGAAATATGTGGTAACATTATGGGTTTAATGTTGCATGGAATTTCCACGTGTGCTAACCTAATTGGCAACATCCTAACAAGGCTTGCCTTGTACCCAAACTTGCAATGCCAGCTGCATTCGGAGATAGTTTCAGGTCACAGTGAATCATCTGAGCTTAAGATAGATGATGTGCTTAGGATGAAATTCCTACTTGCTACTGTATGTGAATCTGCTCGACTTTTGCCTGCTGGACCTCTTCTCCAGAGATGTTCTTTGCAACAAGATGTTAATCTTAATTCCAGCATCACAATACCAGCTGGAGCAATATTGGTTATTCCTTTGCATCTCGTGCAAATGGAAGCTTCTACATGGGGAAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGAAATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCCAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGGAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTACCCTTGATTACAATATATGTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTCAGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTCTTTTTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGCTGTATCGTGCGCGGGAG-CGCAGAA-TCTGTTACTGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTATTGTTGATTGTTTCTTCCACCGTAACTGGTGAAGTTTCTCAAAAAGAACATTGGAATTTGTATTGCCTGGTTTGTGG]
[+] EMBL AK121053 [GACCACCGCCGCGCCGCTCGCCGCCTCCGCCACCGCCTCCGCCGGCAAACCACCCCCTCGCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGGCGCGCTCCTCAGCGGCGGCGGCCCCCACGCCGCCGCGTGCGGCGGCGCCGCCTTCCTCCGCGACTACGCGGAGCGGGGCACCAACGCGCTGCTGTGGGCGGCCCTCCTCGCCGTCACGTGGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCCCGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACCGGCTACCTATCGAAGTTACATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTAATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTGCCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCCTGGATGAAAAACTTAGTGTTGGTACTGGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAGTTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCTTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCTTCTTATGCAGTTCCCCCATTTTGGAAACCTGATTATAGGAGGTACAGAACACTATGTGCTCGATTGAAGCTATTAACACAAGGCATCGTTGCAAAATCAAGAAACCAAAATGGTGTACTTAGCCTTATTGATCTGAGTTCCTGTCAGAGAAGTGAAAGGATGATAAAAGATCCATGCAGAGGCTTTTCTCTGCTTGATGGTGTGATTTCAAGTCGTTGTCTCAACGAGGCAGCTGAAGGGCCTCTCAGCTCAGAAGAAGAAATATGTGGTAACATTATGGGTTTAATGTTGCATGGAATTTCCACGTGTGCTAACCTAATTGGCAACATCCTAACAAGGCTTGCCTTGTACCCAAACTTGCAATGCCAGCTGCATTCGGAGATAGTTTCAGGTCACAGTGAATCATCTGAGCTTAAGATAGATGATGTGCTTAGGATGAAATTCCTACTTGCTACTGTATGTGAATCTGCTCGACTTTTGCCTGCTGGACCTCTTCTCCAGAGATGTTCTTTGCAACAAGATGTTAATCTTAATTCCAGCATCACAATACCAGCTGGAGCAATATTGGTTATTCCTTTGCATCTCGTGCAAATGGAAGCTTCTACATGGGGAAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGAAATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCCAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGGAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTACCCTTGATTACAATATATGTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTCAGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTCTTTTTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGCTGTATCGTGCGCGGGAG CGCAGAA TCTGTTACTGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTATTGTTGATTGTTTCTTCCACCGTAACTGGTGAAGTTTCTCAAAAAGAACATTGGAATTTGTATTGCCTGGTTTGTGG]
[+] EMBL CB661949 [ ACCTATCGAATTTACATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTAATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTGCCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCCTGGATGAAAAACTTAGTGTTGGTACTGGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAGTTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCTTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCTTCTTATGCAGTTCCCCCATTTTGGAAACCTGATTATAGGAGGTACAGAACACTATGTGCTCGATTGAAGCTATTAACACAAGGCATCGTTGCAAAATCAAGAAACCAAAATGGTGTACTTAGCCTTATTGATCTGAGTTCCTGTCAGAGAAGTGAAAGGATGATAAAAGATCCATGCAGAGGCTTTTCTCTGCTTGATGGTGTGATTTCAAGTCGTTGTCTCAACGAGGCAGCTGAAGGGCCTCTCAGCTCAGAAGAAGAAATATGTGGTAACATTATGGGTTTAATGTTGCATGGAATTTCCACGTGTGCTAACCTAATTGGCAACATCCTAACAAGGCTTGCCTTGTANCCAAACTTGCAAT ]
[+] EMBL CB684378 [ AATTGGCAACATCCTAACAAGGCTTGCCTTGTACCCAAACTTGCAATGCCAGCTGCATTCGGAGATAGTTTCAGGTCACAGTGAATCATCTGAGCTTAAGATAGATGATGTGCTTAGGATGAAATTCCTACTTGCTACTGTATGTGAATCTGCTCGACTTTTGCCTGCTGGACCTCTTCTCCAGAGATGTTCTTTGCAACAAGATGTTAATCTTAATTCCAGCATCACAATACCAGCTGGAGCAATATTGGTTATTCCTTTGCATCTCGTGCAAATGGAAGCTTCTACATGGGGAAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGAAATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCCAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGGAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTACCCTTGATTACAATATATGTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTCAGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCGCAGAAACCGCGACGTGGA ]
[-] EMBL CB661950 [ CTCGTGCAAATGGAAGCTTCTACATGGGGAAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGAAATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCCAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGGAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTACCCTTGATTACAATATATGTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTCAGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTCTTTTTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGCTGTATCGTGCGCGGGAGNCGCAGAATTCTGTTACTGAG ]
consensusID : consensus_12534#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 868 fasta sequence
[AAATGGAAGCTTCTACATGGGGTAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGACATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCAAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTTCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTTTCTGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGTTGTATCGTGCGCGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTACTGTTGATTGTTCTTCCACCGTAACTGGTGAAGTTTCT]
[-] EMBL CB631523 [AAATGGAAGCTTCTACATGGGGTAATGATGCTTGCCAGTTCAACCCTAATCGTTTCCTCAAAAAGGACATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCAAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTTCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTTTCTGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGTTGTATCGTGCGCGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTCCCATGTACC ]
[-] EMBL CB628777 [ ATATTAGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCAAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTTCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTTTCTGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGTTGTATCGTGCGCGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTACTGTTGATTGTTCTTCCACCGTAACTGGTGAAGTTTCT]
[-] EMBL CB630049 [ AGCGGCAGCACATAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCAAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTTCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTTTCTGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGTTGTATCGTGCGCGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTACTGTTGATTGTTCTTCCACCGTAACTGGTG ]
[-] EMBL CB630048 [ TTCCTTCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGCAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCAAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTTCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTTTTCTGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCGCAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAATTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCCGGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGATGCACTGTATGGTTGTATCGTGCGGGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTCCTGAAAGTTGTTCTTCCACCGTAACTG ]
consensusID : consensus_12534#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 801 fasta sequence
[CCGACCACCGCCGCGCCGCTCGCCGCCTCCGCCGGCAAACCACCCCTCCCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGGCGCGCTCCTCAGCGGCGGCGGTCCCCACGCCGCCGCGTGCGGCGGCGCCGCCTTCCTCCGCGACTACGCGGAGCGGGGCACCAACGCGCTGCTGTGGGCGGCCCTCCTCGCCGTCACGTGGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCCCGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACCGGCTACCTATCGAAGTTGCATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTGATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTACCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCTTGGATGAAAAACTTAGTGTTGGTGCTAGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAATTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCCTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCT]
[+] EMBL CB628776 [CCGACCACCGCCGCGCCGCTCGCCGCCTCCGCCGGCAAACCACCCCTCCCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGGCGCGCTCCTCAGCGGCGGCGGTCCCCACGCCGCCGCGTGCGGCGGCGCCGCCTTCCTCCGCGACTACGCGGAGCGGGGCACCAACGCGCTGCTGTGGGCGGCCCTCCTCGCCGTCACGTGGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCCCGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACCGGCTACCTATCGAAGTTGCATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTGATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTACCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCTTGGATGAAAAACTTAGTGTTGGTGCTAGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAATTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCCTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCT]
[+] EMBL CB631522 [ GCCGCCTCCGCCGGCAAACCACCCCTCCCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGGCGCGCTCCTCAGCGGCGGCGGTCCCCACGCCGCCGCGTGCGGCGGCGCCGCCTTCCTCCGCGACTACGCGGAGCGGGGCACCAACGCGCTGCTGTGGGCGGCCCTCCTCGCCGTCACGTGGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCCCGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACCGGCTACCTATCGAAGTTGCATGGCAGTTATGGCCCAGTTGTTCGACTGTGGCTCGGACCCTCTCAACTGCTTGTCTCAGTTAAAGATTCTAGGGTGATTAAAGAGTTGCTAACAAAGGCTGAAGATAAGTTACCGTTGACTGGGAAGACATATAATTTGGCTTGTGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAATCACTGAAGTCATTCTTGGATGAAAAACTTAGTGTTGGTGCTAGTGGAAGTTCCTTCAAGATCATTCAAATTGTCCTTGATAGAATTGACTCCATTATGGCCAGGGATTTTCTGGACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGTGATGCCTTCTTTGATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGATGACGGTTGCAAAGGATGCTTGTTTCTGGGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12534#0 --------------GACCACCGCCGCGCCGCTCGCCGCCTCCGCCACCGCCTCCGCCGGC 46
consensus_12534#2 ------------CCGACCACCGCCGCGCCGCTCGCCG------------CCTCCGCCGGC 36
consensus_12534#1 AAATGGAAGCTTCTACATGGGGTAATGATGCTTGCCA------------GTTCAACC--C 46
* * *** *** ** ** *
consensus_12534#0 AAACCACCCCCTCGCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGG 106
consensus_12534#2 AAACCACCCC-TCCCCATGGCCTCCCCCTGCGAGCACCACGTCCCGTACACCCTCCTGGG 95
consensus_12534#1 TAATCGTTTCCTCAAAAAGGACATTAATTTTGAAGAGATATTAGCGGCAGCACATAAAGG 106
** * * ** * ** * * ** * * ** * * **
consensus_12534#0 CGCGCTCCTCAGCGGCGGCGGCCCCCACGCCGCCGCGTGCGGCGGCGCCG---CCTTCCT 163
consensus_12534#2 CGCGCTCCTCAGCGGCGGCGGTCCCCACGCCGCCGCGTGCGGCGGCGCCG---CCTTCCT 152
consensus_12534#1 CTCA------AATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCT 160
* * * ** * * * * * * ** *** * * * * *****
consensus_12534#0 CCG---CGACTACGCGGAGCGGGGCAC-CAACGCGCTGCTGTGGGCGGCCCTCCTCGCCG 219
consensus_12534#2 CCG---CGACTACGCGGAGCGGGGCAC-CAACGCGCTGCTGTGGGCGGCCCTCCTCGCCG 208
consensus_12534#1 TCCATTTGGCTCTG-GGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCG 219
* * ** * **** * *** * ** * ** **** ** **
consensus_12534#0 TCACGT-GGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCC 278
consensus_12534#2 TCACGT-GGCTGCTCGTCCTCCGCCTCGCCGCGCTGCTCCGCCTCTGGGCCCTCGGCGCC 267
consensus_12534#1 CAATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTAT-CC 278
* ** * **** ** * * * ** * * **** ** **
consensus_12534#0 CGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACC 338
consensus_12534#2 CGCCTCCCCGGCCCGCCCGCCTTCCCCGCCGACCCTGGCCTCGCCGCCGGTGACATCACC 327
consensus_12534#1 AAAGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATT-CCGAACCCAAAGAT 337
* * * * * * ** * ** *** **
consensus_12534#0 GGCTACCTATCGAAGTTACATGGCAGTTATGGCCCAGTTG--TTCGACTGTGGCTCGGAC 396
consensus_12534#2 GGCTACCTATCGAAGTTGCATGGCAGTTATGGCCCAGTTG--TTCGACTGTGGCTCGGAC 385
consensus_12534#1 CATCCTCAAGAAAAGAAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTT 397
* * *** *** * * ** * ** * ** * *
consensus_12534#0 CCTCTCAACTGC--------TTGTCTCAGTTAAAG-ATTCTAGGGT---AATTAAAGAGT 444
consensus_12534#2 CCTCTCAACTGC--------TTGTCTCAGTTAAAG-ATTCTAGGGT---GATTAAAGAGT 433
consensus_12534#1 TCCCTTGATTACAATAAATGTTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTT 457
* ** * * * ** * * * * * ** * *** * * *
consensus_12534#0 TGCTAACAAAGGCTGAAGATAAGTTGCC-GTTGACTGGGAAGACATATAATTTGGCT-TG 502
consensus_12534#2 TGCTAACAAAGGCTGAAGATAAGTTACC-GTTGACTGGGAAGACATATAATTTGGCT-TG 491
consensus_12534#1 TTTTTTCTGAAGC--AATATGGTCTCCAAGCTTGCTTTCTTTCCATCCCGTTCAACCGCG 515
* * * * ** ** ** * * * * ** *** ** * *
consensus_12534#0 TGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAA--TCA 560
consensus_12534#2 TGGAAAACTTGGTCTGTTCATTTCCTCGTTCGAGAAGGTCAAAAGTAGGAGGGAA--TCA 549
consensus_12534#1 CAGAAACCGCGACGTGGATGGTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTT 575
**** * * ** ** * ** *** * ** * ** ** *
consensus_12534#0 CTGAAGTCATTCCTGGATGAAAAACTTAGTGTTGGTACTGGTGGA-AGTTCCTTCA-AGA 618
consensus_12534#2 CTGAAGTCATTCTTGGATGAAAAACTTAGTGTTGGTGCTAGTGGA-AGTTCCTTCA-AGA 607
consensus_12534#1 CTAGACCTAGTTTCCATTAATTAGCGTTTTGA-GGCACTTGTGGGCGGTTAAATCACAGG 634
** * * * * * * * * ** ** ** **** *** *** **
consensus_12534#0 TCATTCAAATTGTCCTTGATAGA-----GTTGACTCCATTATGGCCAGGGATTTTCTG-- 671
consensus_12534#2 TCATTCAAATTGTCCTTGATAGA-----ATTGACTCCATTATGGCCAGGGATTTTCTG-- 660
consensus_12534#1 AGGTGTGTACCGATGTGCATAAACCAATAGTAGCTTCTTCTTTTTTTCTTATTTTTTTCC 694
* * * * *** * * ** * * * ***** *
consensus_12534#0 GACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGT 731
consensus_12534#2 GACTGCAGATATTTTTCCCAACACATGGCATTTAACATTGTTGGCTCGGCTCTTTTTGGT 720
consensus_12534#1 GGTTGGTGTTTTCTTCTCCTTCTGGAGGAATGTAATGTTTTATGAT--GCACTGTATGGT 752
* ** * * * ** ** * ** ** *** ** * * * ** ** * ****
consensus_12534#0 GATGCTTTCTTTG----------ATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGAT 781
consensus_12534#2 GATGCCTTCTTTG----------ATTGGTCTGATGCTTCTGCCTATGAGGAGCTGATGAT 770
consensus_12534#1 TGTATCGTGCGCGGGAGCGCAGAATCTGTTAATGAGTTTAGTGTACCATGTACCTATATA 812
* * * ** ** ** * ** * * * **
consensus_12534#0 GACGGTTGCAAAGGATGCTTGTTTCTGGGCTTCTTATGCAGTTCCCCCATTTTGGAAACC 841
consensus_12534#2 GACGGTTGCAAAGGATGCTTGTTTCTGGGCT----------------------------- 801
consensus_12534#1 TATGGTCACATTGTATTACTGTTGATTGTTCTTCCACCGTAACTGGTGAAGTTTCT---- 868
* *** ** * ** **** * *
consensus_12534#0 TGATTATAGGAGGTACAGAACACTATGTGCTCGATTGAAGCTATTAACACAAGGCATCGT 901
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TGCAAAATCAAGAAACCAAAATGGTGTACTTAGCCTTATTGATCTGAGTTCCTGTCAGAG 961
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AAGTGAAAGGATGATAAAAGATCCATGCAGAGGCTTTTCTCTGCTTGATGGTGTGATTTC 1021
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AAGTCGTTGTCTCAACGAGGCAGCTGAAGGGCCTCTCAGCTCAGAAGAAGAAATATGTGG 1081
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TAACATTATGGGTTTAATGTTGCATGGAATTTCCACGTGTGCTAACCTAATTGGCAACAT 1141
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CCTAACAAGGCTTGCCTTGTACCCAAACTTGCAATGCCAGCTGCATTCGGAGATAGTTTC 1201
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AGGTCACAGTGAATCATCTGAGCTTAAGATAGATGATGTGCTTAGGATGAAATTCCTACT 1261
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TGCTACTGTATGTGAATCTGCTCGACTTTTGCCTGCTGGACCTCTTCTCCAGAGATGTTC 1321
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TTTGCAACAAGATGTTAATCTTAATTCCAGCATCACAATACCAGCTGGAGCAATATTGGT 1381
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TATTCCTTTGCATCTCGTGCAAATGGAAGCTTCTACATGGGGAAATGATGCTTGCCAGTT 1441
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CAACCCTAATCGTTTCCTCAAAAAGGAAATTAATTTTGAAGAGATATTAGCGGCAGCACA 1501
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TAAAGGCTCAAATGGGATCAACCTCTTCACTGACGAGTGTGATAAGACTGAATCATTCCT 1561
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TCCATTTGGCTCTGGGAGTCGAGCATGTGTTGGGCAGAAGTTTGCGGTTCTTGGGATCGC 1621
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AATGTTGATTGCTTCTCTGCTTCGCAGTTACGAGGTACAACCTCATCCAGCTTTATCCCA 1681
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AGAAATGGAATCATTAGTTGACAGCAACAGCCTTCACCATATTCCGAACCCAAAGATCAT 1741
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CCTCAAGAAAAGGAGCATCTGAAGCAGCACCTTGACAAATTAAAGCTTGACGCATTTACC 1801
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CTTGATTACAATATATGTTTTTTACTGGTGGCATGCCAGGATATGGTCTCTGTTTTTTTT 1861
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CAGAAGCAATATGGTCTCCAAGCTTGCTTTCTTTCCATCGCAGAAACCGCGACGTGGATG 1921
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 GTTTTTTCCTCCAGATTTTTAACGGCCCCAGTGAGCTTTTCTAGACCTAGTTTCCATTAA 1981
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TTAGCGTTTTGAGGCACTTGTGGGCGGTTAAATCACAGGAGGTGTGTACCGATGTGCATA 2041
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 AACCAATAGTAGCTTCTTCTTTTTTCTTTTTTTTTTCCGGTTGGTGTTTTCTTCTCCTTC 2101
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TGGAGGAATGTAATGTTTTATGATGCACTGTATGGCTGTATCGTGCGCGGGAGCGCAGAA 2161
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 TCTGTTACTGAGTTTAGTGTACCATGTACCTATATATATGGTCACATTGTATTATTGTTG 2221
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 ATTGTTTCTTCCACCGTAACTGGTGAAGTTTCTCAAAAAGAACATTGGAATTTGTATTGC 2281
consensus_12534#2 ------------------------------------------------------------
consensus_12534#1 ------------------------------------------------------------
consensus_12534#0 CTGGTTTGTGG 2292
consensus_12534#2 -----------
consensus_12534#1 -----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||