These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12555#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1382 fasta sequence [TCGCCCAACTCCCAAAACCCTAGAACCGCGCCGCCACAATGCAGGCCGCCGCCGCCGCCGTCCACCGCCCGCACCTCCTCGGC-GCCTACCCCGGC-GGTGGCC-GC-GC-GCGCCGCCCGTCGTCCACCGTGCGGATGGC-GCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTGGGCGCGACGGGCGCCGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCGCCAGCGAGCGCTCCGCGGGGAAGCGCCTCCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGCCGCGCCGGGCGCGTTCGACG-GGGTGGACATCGCGCTCTTCAGCGCCGGC-GGCGGGGTCAGCCGCGCCCACGCTCCC-GCGGCCGTCGCCAGCGGCGCCGTCGTCGTGGACAACAGCTCCGCCTTCCGGATGGA-CCCCGAGGTG-CCGCTCGTCATCCCCGAGGTCAATCCCGAGGCCATGGCGCACGTCCGGCTGGGAAAGGGGGCTATTGTGGCCAACCCGAACTGTTCCACCATCATCTGCCTCATGGCTGCCACACCTCTGCACCGCCACGCCAAGGTGGTAAGGATGGTTGTCAGCACTTACCAAGCAGCAAGTGGTGCTGGGGCTGCGGCCATGGAAGAACTCAAACTTCAAACTCAAGAGGTCTTGGCGGGGAAAGCACCAACATGCAACATTTTCAGTCAGCAGTATGCTTTTAATATATTTTCACATAATGCACCAATTGTTGAAAATGGGTACAATGAGGAGGAGATGAAGATGGTG-AAGGAGACCAG-AAAAATC-TGGAATGATAAAGATGTGAAGGTAACTGCAACCTGCATACGAGTTCCTGTGATGCGTGCACATGCTGAAAGTGTGAATCTACAGTTTGAAAAGCCACTTGATGAGGATACTGCAAGGGAAATCTTGAGGGCAGCTGAAGGTGTTACCATTATTGATGACCGTGCTTCCAATCGCTTCCCCACACCTCTTGAGGTATCGGATAAAGATGATGTAGCAGTGGGTAGAATTCGTCAGGATTTGTCGC-AAGATGATAACAAAGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTTTCTGTACCTTTCTCTCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATCAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTATCTTCTGCACAAGTGTAGAAGAAATCTGAAATTGGGAAATTGGAGTGTGGCCCTTGTTCAAAAAAAAAAAA] [+] EMBL AK060701 [TCGCCCAACTCCCAAAACCCTAGAACCGCGCCGCCACAATGCAGGCCGCCGCCGCCGCCGTCCACCGCCCGCACCTCCTCGGC GCCTACCCCGGC GGTGGCC GC GC GCGCCGCCCGTCGTCCACCGTGCGGATGGC GCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTGGGCGCGACGGGCGCCGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCGCCAGCGAGCGCTCCGCGGGGAAGCGCCTCCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGCCGCGCCGGGCGCGTTCGACG GGGTGGACATCGCGCTCTTCAGCGCCGGC GGCGGGGTCAGCCGCGCCCACGCTCCC GCGGCCGTCGCCAGCGGCGCCGTCGTCGTGGACAACAGCTCCGCCTTCCGGATGGA CCCCGAGGTG CCGCTCGTCATCCCCGAGGTCAATCCCGAGGCCATGGCGCACGTCCGGCTGGGAAAGGGGGCTATTGTGGCCAACCCGAACTGTTCCACCATCATCTGCCTCATGGCTGCCACACCTCTGCACCGCCACGCCAAGGTGGTAAGGATGGTTGTCAGCACTTACCAAGCAGCAAGTGGTGCTGGGGCTGCGGCCATGGAAGAACTCAAACTTCAAACTCAAGAGGTCTTGGCGGGGAAAGCACCAACATGCAACATTTTCAGTCAGCAGTATGCTTTTAATATATTTTCACATAATGCACCAATTGTTGAAAATGGGTACAATGAGGAGGAGATGAAGATGGTG AAGGAGACCAG AAAAATC TGGAATGATAAAGATGTGAAGGTAACTGCAACCTGCATACGAGTTCCTGTGATGCGTGCACATGCTGAAAGTGTGAATCTACAGTTTGAAAAGCCACTTGATGAGGATACTGCAAGGGAAATCTTGAGGGCAGCTGAAGGTGTTACCATTATTGATGACCGTGCTTCCAATCGCTTCCCCACACCTCTTGAGGTATCGGATAAAGATGATGTAGCAGTGGGTAGAATTCGTCAGGATTTGTCGC AAGATGGTAACAAAGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTTTCTGTACCTTTCTCTCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATCAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTATCTTCTGCACAAGTGTAGAAGAAATCTGAAATTGGGAAATTGGAGTGTGGCCC ] [+] EMBL AU166310 [ CCCAAAACCCTAGAACCGNGCCGCCACAATGCAGGCCGCCGCCGCCGCCGTCCACCGCCCGCACCTCCTCGGCAGCCTACCCCGGCAGGTGGCC GCAGC GCGCCGCCCGTCGTCCACCGTGCGGATGGC GCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTGGGCGCGACGGGCGCCGTCGGCCAGGAGTTCCTCCGAGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCGCCAGCGAGCGCTCCGCGGGGAAGCGCCTCCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGCCGCGCCGGGCGCGTTCGACGNGGGTGGACATCGCGCTCTTCAGCGCCGGCGGGCGGGGTCAGCCGCGCCCACGCTCCC GGGGg ] [+] EMBL AU076192 [ TAGAACCGCGCCGCCACAATGCAGGCCGCCGCCGCCGCCGTCCACNGCCCGCACNTCCTCGGC GCCTACCCCGGC GGTGGCC GC GC GCGCCGCCCGTCGTCCACCGTGCGGATGGC GCTTCGGGAGGACGGGCCGTCGGTGGCGANCNTGGGCGCGACGGGCG CGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCNCCAGCGAGCGCTCCGGGNGGAAGCGCCTCCCGTTCGANGG CAGGAGTA AACGTCCA GACCTCGCCGCGCCGGGCGGTTTCGACG GGGTGGACAT ] [+] EMBL AU067968 [ CGCCGCCACAATGCAGGCCGCCGNCGNCGCCGTCCACCGCCCGCACCTCCTCGGC GCCTACCCCGGC GGTGGCC GC GC GCGCCGCCCGTNGTCCACCGTGCGGATGGC GCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTNGGCGCGACGGGCG CGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGNCTCCTCGTCAGCGAGCGCTCCG GGGGAAGCGCCTTCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGTCGNGTCGTGCG GTTCGACG GGGTGGACATCGTGNTC ] [+] EMBL AU181225 [ CACAATGCAGGCCGCCGCCGCCGCCGTCCACCGCCCGCACCTCCTCGGCAGCCTACCCCGGCAGGTGGCCAGA GCAGCGCCGCCCGTCGTCCACCGTGCGGATGGCAGCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTGGGCGCGACGGGCGCCGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCGCCAGCGAGCGCTCCGCGGGGAAGCGCCTCCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGCCGAGCCGGGCGCGTTCGACGAGGGTGGACATCGCGCTCTTCAGCGCCGGC GGCGGGGTCAGCCGCGCCCACGCTCCCNGCGGCCGTCGCCAGNGGCGCCGTCGTCGTGGACAACAGCTCCGCCTTCCGGATGGACCCCCGAGGT ] [+] EMBL AU181232 [ AGGCCGCCGCCGCCGCCGTCCACCGCCCGCACCTCCTCGGC GCCTACCCCGGC GGTGGCC GC GC GCGCCGCCCGTCGTCCACCGTGCGGATGGC GCTTCGGGAGGACGGGCCGTCGGTGGCGATCGTGGGCGCGACGGGCGCCGTCGGCCAGGAGTTCCTCCGCGTCATCTCCTCCCGGGGCTTCCCCTACCGGAGCCTCCGCCTCCTCGCCAGCGAGCGCTCCGCGGGGAAGCGCCTCCCGTTCGAGGGCCAGGAGTACACCGTCCAGGACCTCGCCGCGCCGGGCGCGTTCGACG GGGTGGACATCGCGCTCTTCAGCGCCGGC GGCGGGGTCAGCCGCGCCCACGCTCCC GCGGCCGTCGCCAGCGGCGCCGTCGTCGTGGACAACAGCTCCGCCTTCCGGATGGA CCCCGAGGTGCCCGCTCGT ] [+] EMBL AU030255 [ ATGNTGNANGNAGNCCAGAAAAAATCNTNGNATGATAAAGATGTGANGGTAACTGCAACCTGCATACGAGTCCCNGTGACGCGTGCACATGCTGAAAGTGTGAATCTACAGTTTGNNAAGCCACTTGATGAGGATACTGCAAGGGAAATCTTGAGGGCAGCTGAAGGTGTTNCCATTATTGATGACCGTGNTNCCAATCGCTTCCCNACACCTCTTGAGGTATCGGATAAAGNTGATGTAGCNGNGGGTAGAATTCGTCAGGATTTGTCGCAAAGATGATAACAANGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTNTCTGTACCTTTCTCTCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATCAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTATCTTCTGCACAAGTGTAGAAGAAATCTGAAATTGGGAAATTGGNGTGTGGCCNTTGTTCAAAAAAAAAAAA] [+] EMBL AU181226 [ AAAGTGTGAATCTACAGTTTGAAAAGCCACTTGATGAGGATACTGCAAGGGAAATCTTGAGGGCAGCTGAAGGTGTTACCATTATTGATGACCGTGCTTCCAATCGCTTCCCCACACCTCTTGAGGTATCGGATAAAGATGATGTAGCAGTGGGTAGAATTCGTCAGGATTTGTCGC AAGATGATAACAAAGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTTTCTGTACCTTTCTCTCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATCAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTAaaaa ] [+] EMBL AU166311 [ GCAGCTGAAGGTGTTACCATTATTGATGACCGTGCTTCCAATCGCTTCCCCACACCTCTTGAGGTATCGGATAAAGATGATGTAGCAGTGGGTAGAATTCGTCAGGATTTGTCGC AAGATGATAACAAAGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTTTCTGTACCTTTCTCTCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATCAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTATCTTCTGCACAAGTGTAGAAGAAATCTGAAATTGGGAAATTGGAGTGTGGCCCTTGTTCAAAAAA ] [+] EMBL AU076037 [ CCCACACCTCTTGAGGTATCGGATAAAGATGATGTAGCAGTGGGTAGAATTCGTCAGGATTTGTCGC NAGATGATANCAAAGGGCTGGACATATTTGTTTGTGGAGATCAAATACGTAAAGGTGCTGCACTCAATGCTGTGCAGATTGCTGAAATGCTACTCAAGTGATTTTCTTNTCTGTACCTNTCTCNCCTTGCCCCTCTTTGCTCTAGTCATTGTTTGACGGATGTACTCTGGTTAGTATGAGATNAATTTTGATCATCTTTTGTAATCTATATTCCTAGTGAAATAAATGTAAAACGGTTTTGCTCTAaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||