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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2150 fasta sequence
[TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTGCTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTATTTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAATTAGTTACCTTCTTTGCAACGATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACAATAGAACACATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAGGCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTATTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAATTCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTTTATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGTGTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTGAATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACTTGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAAAGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTACAGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTGTATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAATGAT]
[+] EMBL AK121380 [TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTGCTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTATTTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAATTAGTTACCTTCTTTGCAACGATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACAATAGAACACATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAGGCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTATTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAATTCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTTTATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGTGTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTGAATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACTTGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAAAGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTACAGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTGTATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAATGAT]
consensusID : consensus_12558#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1281 fasta sequence
[TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT-GGAGCTTGCAAACCTA-CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA]
[+] EMBL AK059280 [TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACT ]
[+] EMBL CB653508 [ CTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCANGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAAATTGACAAACCTCGAGATACTGCA ]
[+] EMBL CB682536 [ CTCCCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC ]
[+] EMBL AU181034 [ CGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGT ]
[+] EMBL CA753497 [ TCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGGAGCTTGCAAACCTACCCAGAAa ]
[+] EMBL OSS12158A [ CGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGNACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACT ]
[+] EMBL CB000707 [ GTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCATGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCCAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGATTTACTGGGAGGATCCCTCCTGAAC ]
[+] EMBL C22622 [ ACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA]
consensusID : consensus_12558#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence
[CCATCACGTCATTCTNTGTACATATGTATACTCCTGCAGGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTGTGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTTTGATCAGCTTTTGGGTCTGATATGTCATATGTCTCATTTTACCATGGTTTACAGGTACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACCACTTTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAGGCCACTTGCAACCCAAAA]
[+] EMBL BQ906680 [CCATCACGTCATTCTNTGTACATATGTATACTCCTGCAGGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTGTGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTTTGATCAGCTTTTGGGTCTGATATGTCATATGTCTCATTTTACCATGGTTTACAGGTACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACCACTTTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAGGCCACTTGCAACCCAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12558#0 TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTC 60
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCT 120
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGC 180
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 ATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGA 240
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGA 300
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTAC 360
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 AGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTG 420
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTAT 480
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAAT-TAGTTACCTTCTTTGCAACG- 538
consensus_12558#1 --------------------TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCC 40
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 ATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACA 598
consensus_12558#1 GCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCC 100
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 ATAGAACAC--ATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAG 656
consensus_12558#1 GCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTG 160
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 GCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTA 716
consensus_12558#1 GCCGGCGTCGC---AAGCGG---CAAGACGGTCAAGAGGGACG-TGAAAGCATTGAAT-- 211
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAAT 776
consensus_12558#1 -----GAGATCAAATCTTCGT-TAGGATGGAGAGTTGTC-TACT-CATGGGTTGGTGATG 263
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTT 836
consensus_12558#1 ACCCT-TGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTG--------TGACCTGT---- 310
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGT 896
consensus_12558#1 --TCTCAGCAAGGAGATTACAGAG--------TTGTCACCGAAC-------TTGAAGTCT 353
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 GTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTG 956
consensus_12558#1 ATGC-TGTATCAATAGTCGGTCCTTTCCCTACA-------GCAGT--TACAAACCTTTTG 403
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 AATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCC 1016
consensus_12558#1 GAT---------TTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCC 454
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAG 1076
consensus_12558#1 CCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAG 514
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 GATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTC 1136
consensus_12558#1 GATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTC 574
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 AATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTG 1196
consensus_12558#1 AATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTG 634
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAAC 1256
consensus_12558#1 TATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAAC 694
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 CTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC 1316
consensus_12558#1 CTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC 754
consensus_12558#2 --CCATCACGTCATTCTNTGTA-----CATATG-TATACTCCTGCAGGCACTTGTCTAAT 52
* **** * * * *** ** ** ** * ** **** * ** *
consensus_12558#0 AATGGG--AATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTG 1374
consensus_12558#1 AATGGG--AATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTG 812
consensus_12558#2 AATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTG 112
*** ** ** * ** * ** * ** ** *** * *** * **
consensus_12558#0 -GCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAAT 1433
consensus_12558#1 -GCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAAT 871
consensus_12558#2 TGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTT----------T 162
* * * * * * ** * **** ** * ** *** * *
consensus_12558#0 AATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTA 1493
consensus_12558#1 AATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTA 931
consensus_12558#2 GATCAGCTTTTGGGTCTGATAT-GTCATA--TGTCTCATTTTACCA---TGGTTTACAGG 216
** *** * ** ***** ** * * **** ** * * ** **
consensus_12558#0 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 1553
consensus_12558#1 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 991
consensus_12558#2 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 276
************************************************************
consensus_12558#0 TTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACT 1613
consensus_12558#1 TTGAAGGAGCTGTA---------------------------------------------- 1005
consensus_12558#2 TTGAAGGAGCTGTACCACT----------------------------------------- 295
**************
consensus_12558#0 TGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGT 1673
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 ACATTGAAGGAAACCAATTTAGA-----CCAGGAAGCAAATCAAAAGGAACGCACAAGGT 1728
consensus_12558#1 -CATTGAAGGAAACCAATTTAGA-----CCAGGAAGCAAATCAAAAGGAACGCACAAGGT 1059
consensus_12558#2 -TTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGT 354
************ ***** * ********************************
consensus_12558#0 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 1788
consensus_12558#1 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 1119
consensus_12558#2 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 414
************************************************************
consensus_12558#0 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 1848
consensus_12558#1 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 1179
consensus_12558#2 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 474
************************************************************
consensus_12558#0 GGATATATACGATATATGTATCAGTAGTACAGACACTGT--TTCTCACAGCACTGTTCGA 1906
consensus_12558#1 GGATATATACGATATATGTATCAGTAGTACAGACACTGT--TTCTCACAGCACTGTTCGA 1237
consensus_12558#2 GGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGA 534
*************************************** *******************
consensus_12558#0 GGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAA 1966
consensus_12558#1 GGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA---------------- 1281
consensus_12558#2 GGACAAGTTCACACACACAAA-GGCCACTTGCAACCCAAAA------------------- 574
********************* ************ *** **
consensus_12558#0 AGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTAC 2026
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 AGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTG 2086
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAA 2146
consensus_12558#1 ------------------------------------------------------------
consensus_12558#2 ------------------------------------------------------------
consensus_12558#0 TGAT 2150
consensus_12558#1 ----
consensus_12558#2 ----
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||