These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2150 fasta sequence [TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTGCTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTATTTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAATTAGTTACCTTCTTTGCAACGATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACAATAGAACACATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAGGCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTATTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAATTCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTTTATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGTGTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTGAATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACTTGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAAAGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTACAGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTGTATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAATGAT] [+] EMBL AK121380 [TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTGCTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTATTTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAATTAGTTACCTTCTTTGCAACGATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACAATAGAACACATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAGGCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTATTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAATTCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTTTATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGTGTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTGAATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACTTGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAAAGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTACAGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTGTATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAATGAT] consensusID : consensus_12558#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1281 fasta sequence [TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT-GGAGCTTGCAAACCTA-CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA] [+] EMBL AK059280 [TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACT ] [+] EMBL CB653508 [ CTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCANGGATTTAATTGGCAATGGGAATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTGGCGTTCTGCCAGACCAGATTGCAAAATTGACAAACCTCGAGATACTGCA ] [+] EMBL CB682536 [ CTCCCTCATATGGTCTCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCAAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAACCTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC ] [+] EMBL AU181034 [ CGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGT ] [+] EMBL CA753497 [ TCCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGTGGGAGCTTGCAAACCTACCCAGAAa ] [+] EMBL OSS12158A [ CGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGCATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGACCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGNACAAGCTTCAGGATGTGCTCCCACCTGAAATTGGTGAACT ] [+] EMBL CB000707 [ GTCTGGTGTGACCTGTTCTCAGCAAGGAGATTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTACAGCAGTTACAAACCTTTTGGATTTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCCCCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCATGATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTCAATAACTTCAAAGGTGAAATTCCTGT GGAGCTTGCCAACCTA CCAGAACTGCGCTATCTGTATCTTCATGAGAACCGATTTACTGGGAGGATCCCTCCTGAAC ] [+] EMBL C22622 [ ACAAACCTCGAGATACTGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTATACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACATTGAAGGAAACCAATTTAGACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA] consensusID : consensus_12558#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence [CCATCACGTCATTCTNTGTACATATGTATACTCCTGCAGGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTGTGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTTTGATCAGCTTTTGGGTCTGATATGTCATATGTCTCATTTTACCATGGTTTACAGGTACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACCACTTTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAGGCCACTTGCAACCCAAAA] [+] EMBL BQ906680 [CCATCACGTCATTCTNTGTACATATGTATACTCCTGCAGGCACTTGTCTAATAATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTGTGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTTTGATCAGCTTTTGGGTCTGATATGTCATATGTCTCATTTTACCATGGTTTACAGGTACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTTTTGAAGGAGCTGTACCACTTTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGTGCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCAGAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTAGGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGAGGACAAGTTCACACACACAAAGGCCACTTGCAACCCAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12558#0 TCCCGCGGCGCGCCCCGCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTC 60 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CATGGCCGCCGCCGCCGCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCT 120 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CCTCCTCCTCGTCCTGGCCGGCGTCGCAAGCGGCAAGACGGTCAAGAGGGACGTGAAAGC 180 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 ATTGAATGAGATCAAATCTTCGTTAGGATGGAGAGTTGTCTACTCATGGGTTGGTGATGA 240 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CCCTTGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTGTGACCTGTTCTCAGCAAGGAGA 300 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TTACAGAGTTGTCACCGAACTTGAAGTCTATGCTGTATCAATAGTCGGTCCTTTCCCTAC 360 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 AGCAGTTACAAACCTTTTGGATTTAAAAAGATTGTAAGTATGTTTTCCTTGTCACCACTG 420 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CTTTGTTCCCGTATTATGTACAATTATCTTGAGGTGCATGTGTTGGTACTTTGTAATTAT 480 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TTGGTGCAACCTGAGTGGAGTTAATGTTATTGTCTAAT-TAGTTACCTTCTTTGCAACG- 538 consensus_12558#1 --------------------TCTCTCTCTCTCTCTCATATGGTCTCCCGCGGCGCGCCCC 40 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 ATAATAAATTATACGTTTCTGGTCTTTTAGAGTTTTAGTACAACCATCAGCGAAATTACA 598 consensus_12558#1 GCTACTGTCCATCCTAGCGCGGAGCCGCAGCTTCCCCACACGTCCATGGCCGCCGCCGCC 100 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 ATAGAACAC--ATCTGTGCAGATGTATGCGCTCTTGTAAATTTATGTTTCCATGTAATAG 656 consensus_12558#1 GCCGCCCCCCGGTTCTTGCCCGTCCGCCCGCTCTTTCTCCTCCTCCTCCTCCTCGTCCTG 160 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 GCTGTGCTCATGAAAAATGGATTTAGAGAGAACATTAGCCATAATAGAAGAATTAATTTA 716 consensus_12558#1 GCCGGCGTCGC---AAGCGG---CAAGACGGTCAAGAGGGACG-TGAAAGCATTGAAT-- 211 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TTCTTTAAATCACTTCAGCTTATAAAATATGGAGCTTTTATATTGCTTGAGTTGCAGAAT 776 consensus_12558#1 -----GAGATCAAATCTTCGT-TAGGATGGAGAGTTGTC-TACT-CATGGGTTGGTGATG 263 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TCTATGTACAAACAGTTTCTTCCATTTGCATATTGCAGCGGATATATTTGAGTAGTATTT 836 consensus_12558#1 ACCCT-TGCGGGCATGGTGATCTGCCCCCCTGGTCTGGTG--------TGACCTGT---- 310 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TATTTTCCCAAAAAAACTATACAGGACCAATTCTTCTATAAAACAAGTACCTTAAAGGGT 896 consensus_12558#1 --TCTCAGCAAGGAGATTACAGAG--------TTGTCACCGAAC-------TTGAAGTCT 353 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 GTAAGTATCTTTGTAATTTGACCATATCTTGCATATTTAAGCAATCCTTTAAACCATGTG 956 consensus_12558#1 ATGC-TGTATCAATAGTCGGTCCTTTCCCTACA-------GCAGT--TACAAACCTTTTG 403 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 AATAATGACTACTCCAACTACAGGGATCTACACAATAACAAGTTGACAGGGCCCATTCCC 1016 consensus_12558#1 GAT---------TTAAAAAGATTGGATCTACACAATAACAAGTTGACAGGGCCCATTCCC 454 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAG 1076 consensus_12558#1 CCACAGATTGGACGGCTGAAACACCTCAGGATATTGAACCTGAGGTGGAACAAGCTTCAG 514 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 GATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTC 1136 consensus_12558#1 GATGTGCTCCCACCTGAAATTGGTGAACTGAAGAAACTGACACATTTATATTTGAGCTTC 574 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 AATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTG 1196 consensus_12558#1 AATAACTTCAAAGGTGAAATTCCTGTGGAGCTTGCAAACCTACCAGAACTGCGCTATCTG 634 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAAC 1256 consensus_12558#1 TATCTTCATGAGAACCGCTTTACTGGGAGGATCCCTCCTGAACTTGGAACTCTCAAGAAC 694 consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 CTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC 1316 consensus_12558#1 CTTCGTCACCTGGATGTTGGTAACAACCACTTGATAGGCACCCTCAGGGATTTAATTGGC 754 consensus_12558#2 --CCATCACGTCATTCTNTGTA-----CATATG-TATACTCCTGCAGGCACTTGTCTAAT 52 * **** * * * *** ** ** ** * ** **** * ** * consensus_12558#0 AATGGG--AATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTG 1374 consensus_12558#1 AATGGG--AATGGTTTCCCCTCCCTCAGAAATCTGTATCTTAACAATAATGATTTGACTG 812 consensus_12558#2 AATAGGCTGATTGGATCGATATCACCAAGCTAGTTCATATTCCCAAGATTGACCTATTTG 112 *** ** ** * ** * ** * ** ** *** * *** * ** consensus_12558#0 -GCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAAT 1433 consensus_12558#1 -GCGTTCTGCCAGACCAGATTGCAAATTTGACAAACCTCGAGATACTGCACTTGTCTAAT 871 consensus_12558#2 TGAGCTTTACTGCTTCGATTTCTATATTTATGTAAAGTTGAAATATTTT----------T 162 * * * * * * ** * **** ** * ** *** * * consensus_12558#0 AATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTA 1493 consensus_12558#1 AATAGGCTGATTGGATCGATATCACCAAAGCTAGTTCATATTCCAAGATTGACCTATTTA 931 consensus_12558#2 GATCAGCTTTTGGGTCTGATAT-GTCATA--TGTCTCATTTTACCA---TGGTTTACAGG 216 ** *** * ** ***** ** * * **** ** * * ** ** consensus_12558#0 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 1553 consensus_12558#1 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 991 consensus_12558#2 TACTTGGACAATAACAACTTCATTGGGAGGATTCCTGAAGGATTATACAAACATCCATTT 276 ************************************************************ consensus_12558#0 TTGAAGGAGCTGTAAGCTGGCTTTAGAATTTCTACTCTCACGACATTATTATTTCATACT 1613 consensus_12558#1 TTGAAGGAGCTGTA---------------------------------------------- 1005 consensus_12558#2 TTGAAGGAGCTGTACCACT----------------------------------------- 295 ************** consensus_12558#0 TGAATCTGCTCTGTTTTAGGTTTACTTAGGCGCACACTTTTTTTTTTTTTTGATGCAGGT 1673 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 ACATTGAAGGAAACCAATTTAGA-----CCAGGAAGCAAATCAAAAGGAACGCACAAGGT 1728 consensus_12558#1 -CATTGAAGGAAACCAATTTAGA-----CCAGGAAGCAAATCAAAAGGAACGCACAAGGT 1059 consensus_12558#2 -TTTTGAAGGAAACCCATTTAAAGGAAACCAGGAAGCAAATCAAAAGGAACGCACAAGGT 354 ************ ***** * ******************************** consensus_12558#0 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 1788 consensus_12558#1 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 1119 consensus_12558#2 GCTTGAATTACCTGATGCTGACATCTTAGTTTAACAACTGTTTATTCTGTGACGATAGCA 414 ************************************************************ consensus_12558#0 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 1848 consensus_12558#1 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 1179 consensus_12558#2 GAGCGGCTACCGTTCTACATCTCCTCAGCATGCACCAACAAAAATGTATGCATGTTTTTA 474 ************************************************************ consensus_12558#0 GGATATATACGATATATGTATCAGTAGTACAGACACTGT--TTCTCACAGCACTGTTCGA 1906 consensus_12558#1 GGATATATACGATATATGTATCAGTAGTACAGACACTGT--TTCTCACAGCACTGTTCGA 1237 consensus_12558#2 GGATATATACGATATATGTATCAGTAGTACAGACACTGTGTTTCTCACAGCACTGTTCGA 534 *************************************** ******************* consensus_12558#0 GGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAAGAAAAAAAAATTGTAA 1966 consensus_12558#1 GGACAAGTTCACACACACAAAAGGCCACTTGCAAACCAGAAAAA---------------- 1281 consensus_12558#2 GGACAAGTTCACACACACAAA-GGCCACTTGCAACCCAAAA------------------- 574 ********************* ************ *** ** consensus_12558#0 AGTCCAGAGCACTGCTGCTATCCTGTCATCCAAGAGTATGTTTTCATTAGATGAGTGTAC 2026 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 AGGTTGTATTGCATTTCTTGTAACTTAGTACTACTGTGTAATGGAGATGCAGTTCAGCTG 2086 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TATTGCCAGCACATTTGCATGGCACCGACAGTCCTGGTGTAATGTAACCAGTGTGCTCAA 2146 consensus_12558#1 ------------------------------------------------------------ consensus_12558#2 ------------------------------------------------------------ consensus_12558#0 TGAT 2150 consensus_12558#1 ---- consensus_12558#2 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||