These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12565#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 971 fasta sequence [CACGTGTACATAACTCTTTCGGTCCGGGACCCTCTCTTGTTTTTCTTCGTTGCTCGCGAGCTCTTCCCCCCTCGCCTCGCCTCCCCACCCAACAAGCCCGCGGCGGCGACTAGGGTTTTGACCCCCCGGAATCCCCCCTCCTCTCGCCGCCTCCGCCTCCGCCGCCGCCGCCTTCCTCCCCGCGCCGGCGACGATCTGCTCCTCCTCCCCCGCCGGCATCGCTGTTTCCGGATCTAGCGCAAGATGCTTCCGCTCTCGCTCCT-CAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG-CCACCAGGTGTAGGCCGCGGAAGAGGAA-GAGGTGATATA-GGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCA-GGATGATGGTGGCAGCAAAGGCGGTGGTGGCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGC-TTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG-GACTG-GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGC-CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA] [+] EMBL AK100819 [CACGTGTACATAACTCTTTCGGTCCGGGACCCTCTCTTGTTTTTCTTCGTTGCTCGCGAGCTCTTCCCCCCTCGCCTCGCCTCCCCACCCAACAAGCCCGCGGCGGCGACTAGGGTTTTGACCCCCCGGAATCCCCCCTCCTCTCGCCGCCTCCGCCTCCGCCGCCGCCGCCTTCCTCCCCGCGCCGGCGACGATCTGCTCCTCCTCCCCCGCCGGCATCGCTGTTTCCGGATCTAGCGCAAGATGCTTCCGCTCTCGCTCCT CAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG CCACCAGGTGTAGGCCGCGGAAGAGGAA GAGGTGATATA GGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCA GGATGATGGTGGCAGCAAAGGCGGTGGTGGCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGC TTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG GACTG GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGC CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTActttgacc ] [+] EMBL AU076122 [ gcaggagTCGCCTCCCCACCCAACAAGCCCGCGGCGGCGACTAGGGTTTTGACCCCCCGGAATCCCCCCTCCTCTCGCCGCCTCCGCCTCCGCCGCCGCCGCCTTCCTCCCCGCGCCGGCGACGATCTGCTCCTCCTCCCCCGCCGGCATCGCTGTTTCCGGATCTAGCGCAAGATGCTTCCGCTCTCGCTCCT CAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG CCACCAGGTGTAGGCCGCGGAAGAGGAA GAGGTGATATA GGTACTAAGCCTGGA ] [+] EMBL AU078354 [ CGCGGCGGCGACTAGGGTTTTNNACCCCCGGAATCCCCCCTCCTCTCGCCGCCTCCGCCTCCGCCGCCGCCGCCTTCCTCCCCGCGCCGGCGACGATCTGCTCCTCCTCCCCCGCCGGCATCGCTGTTTCCGGATCTAGCGCAAGATGCTTCCGCTCTCGCTCCT CAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTC ] [+] EMBL C28016 [ ncgtnagnCGCAANANACTTCCNCTCTCATTCCT CAAGACCGCCCAGGGGCATCCCATGCTCGTGGAGCTTAAGAACGGCGAGACGTACAACGGGCACTTGGTGAACTGCGACACGTGGATGAACATCCACCTCCGGGAGGTTATTTNCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGANTGTTACATCCGTGGGAACACCATCAAGTATCTTCGGNTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG CCACCAGGTGTAGGCCGCGGAAGAGGAANAAGGTGATATAGGGTACT ] [+] EMBL AU078355 [ atCTTTCCCTTTCGNTCCTNAAAGACCGCCCA GGGCATCCCATGCTCGTGGA CTTAAGACCGGCGAGACGTACAACGGGCACTTGGTGAACTNCGACACGTGGATGAACATCCA CTCCGGGAGGTTATTTCCNCCTCAAAGGATGGTGATAA TTTTGGAGGATGCCAGAATGTTACANCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG CCACCAGGTNTAGGCCGCGGAAGAGGAA GAGGTGATATA GGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCA GGATGATGGTGGCAGCAAAGGCGGTGGTGNCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGCTTTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG GACTG GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGC CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAAAAAAAAAAAAAAAAAAA ] [+] EMBL C99052 [ GGATGAACATCCACCTCCGGGAGGTTATTTGCACCTCAAAGGATGGTGATAAGTTTTGGAGGATGCCAGAATGTTACATCCGTGGGAACACCATCAAGTATCTTCGGGTTCCTGATGAGGTGATTGACAAGGTCCAGGAAGAGACTTCAAAGAGCAGATCAGATAGGAGG CCACCAGGTGTAGGCCGCGGAAGAGGAA GAGGTGATATA GGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCA GGATGATGGTGGCAGCAAAGGCGGTGGTGGCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGAC TGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGC TTTTTTAAGGC TTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATN GACTG GTGGAGTAAGCATTGCTTT CTTTATCA TTTGTGG ] [+] EMBL C99053 [ AGACTTCAAAGAGCAGATCAGATAGGAGGCCCACCAGGTGTAGGCCGCGGAAGAGGAA GAGGTGATATA GGTACTAAGCCTGGAGGCAGAGGCATTGGGCGTGGCCA GGATGATGGTGGCAGCAAAGGCGGTGGTGNCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGC TTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG GACTG GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGC CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAA ] [+] EMBL BI805476 [ AGNCATTGGGCANTGCCATGGATGATGGT GCAGCNAA GCGGTGGTGTCCGTGGAAGGGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGCCCG GTACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGC TTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATGCNCCTGCCCCGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGCACTGTCTCGAAACAATTTGTTTGATGTCTGCACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAAAAAAA ] [+] EMBL AU076123 [ GGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGANAGGGAAGGTCNCTTGTGGGAATGCCGC TTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG GACTG GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAANAGGCAGCGGTTGGC CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAA] [+] EMBL AU078296 [ GGGAGGAATTGGAGGTAAAGGTGGCATCAAAGGTGGGGGCCGCGGACGTGGGTGAGAGGGAAGGTCACTTGTGGGAATGCCGCTTTTTTTAAGGCTTTGTGTCACATAGATTGCTTTAGGAGGGTGAAGAATG GACTG GTGGAGTAAGCATTGCTTTGCTTTATCATTTTGTGGTATGACCGAAAAATGTTTCATGGGTTCAGTAGTTACCAGTGAAGAGGCAGCGGTTGGC CTGTCTCGAAACAATTTGTTTGATGTCTGGACCCTCGACTATATTGAATATTATTGTGGTTATTAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||