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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1257 cluster # 1257       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1257#0 length = 692 sequences # 2  

consensusID : consensus_1257#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 692
fasta sequence
                              [AACTAGTCTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATTCACATCCATTTCGTACCCTTTGTATAAATATATATAGCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGTGAAACAAAAACAAAAGCAAAGCACGGCCGGTAAAATCAAAAGACGATGAACCAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGANATGAACAATTAAACAAGGCTATATNTGACGATGACGGCTTAGTTGCCACCANACTCCTCNCAGCCCGGGGGCTTGTNNGCGATGAANCTGATGANCTGCACCTGCCTGACTTTGTCGAACCGATGANACGGACAAATGCTCAGGGTTCCCTTCTTGGCNCCCCCAACNCCTTGAACNCTGGGTTGNTTCNGTGCCCCCGAACATGGCACTTCCCATGGTCCCATACCGCCNNCCTATTTCCGGGGNTTTTGGTCNCCCCGGTNAAAAATCCAACTTNTGAATCCAGGCGGCCCCCNTGGAAGGANAGTTTCATTTCTCCGANTCCCCCGGNAANNGNGGTGNAGNTTCCAATTTTNNCCCCATNGCCCCTNTGTCTTNTTTCNNCCTTTATTTTCAANTGT]

[+] EMBL CF324691             [AACTAGTCTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATTCACATCCATTTCGTACCCTTTGTATAAATATATATAGCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAAGAGAGATCAGGTGAAACAAAAACAAAAGCAAAGCACGGCCGGTAAAATCAAAAGACGATGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BE229226             [                                                                                             TAGCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCANATACCACTCTTACATCAAGTCANANAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGANATGAACAATTAAACAAGGCTATATNTGACGATGACGGCTTAGTTGCCACCANACTCCTCNCAGCCCGGGGGCTTGTNNGCGATGAANCTGATGANCTGCACCTGCCTGACTTTGTCGAACCGATGANACGGACAAATGCTCAGGGTTCCCTTCTTGGCNCCCCCAACNCCTTGAACNCTGGGTTGNTTCNGTGCCCCCGAACATGGCACTTCCCATGGTCCCATACCGCCNNCCTATTTCCGGGGNTTTTGGTCNCCCCGGTNAAAAATCCAACTTNTGAATCCAGGCGGCCCCCNTGGAAGGANAGTTTCATTTCTCCGANTCCCCCGGNAANNGNGGTGNAGNTTCCAATTTTNNCCCCATNGCCCCTNTGTCTTNTTTCNNCCTTTATTTTCAANTGT]


>consensus_1257#0 AACTAGTCTCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATTC ACATCCATTTCGTACCCTTTGTATAAATATATATAGCCGGAGCTTCCATATATTTCATTC ACATATGCCTCACCCAACAACATATAGTCGTAGCAAATACCACTTTTACATCAAGTCAAA GAGAGATCAGGTGAAACAAAAACAAAAGCAAAGCACGGCCGGTAAAATCAAAAGACGATG AACCAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGANATGAACAAT TAAACAAGGCTATATNTGACGATGACGGCTTAGTTGCCACCANACTCCTCNCAGCCCGGG GGCTTGTNNGCGATGAANCTGATGANCTGCACCTGCCTGACTTTGTCGAACCGATGANAC GGACAAATGCTCAGGGTTCCCTTCTTGGCNCCCCCAACNCCTTGAACNCTGGGTTGNTTC NGTGCCCCCGAACATGGCACTTCCCATGGTCCCATACCGCCNNCCTATTTCCGGGGNTTT TGGTCNCCCCGGTNAAAAATCCAACTTNTGAATCCAGGCGGCCCCCNTGGAAGGANAGTT TCATTTCTCCGANTCCCCCGGNAANNGNGGTGNAGNTTCCAATTTTNNCCCCATNGCCCC TNTGTCTTNTTTCNNCCTTTATTTTCAANTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)