cluster # 12584

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Oryza sativa
cluster # 12584 cluster # 12584 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12584#0 length = 2751 sequences # 10

consensus_12584#1 length = 388 sequences # 1

consensusID : consensus_12584#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2751
fasta sequence

                              [GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCGTCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCATAAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC-GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTTTTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGGTGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGCTCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCTTTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTGACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACATCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAGCTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGGCTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCAGTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAGCAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACGTGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCTCACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCAAGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGCTAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTGGCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGATAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCCCTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTTTCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGATTGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAATTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT]

[+] EMBL BI796923             [GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCGTCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCATAAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGA CCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTC GCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK100120             [                                                                                                                                      GAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCAGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB667684             [                                                                                                                                                   AACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK109758             [                                                                                                                                                      CTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTTTTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGGTGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGCTCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCTTTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTGACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACATCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAGCTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGGCTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCAGTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAGCAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACGTGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCTCACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCAAGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGCTAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTGGCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGATAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCCCTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTTTCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGATTGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAATTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT]
[+] EMBL CB668167             [                                                                                                                                                       TCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB668168             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTTGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTGGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB665113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCCGCGGGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGGAAAATTAAATAGATGCATTTAGTTGCTCTGGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB667685             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB654162             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTATTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCCCCGCGTGGGCCAAGGTGGAGAGCGTTGGGGATAGCGTGCTTTTTTTTGACAAGCACGGGCATGGGTTTTTGCTGGAGCCCAACGGCGCCGCGGAGATGAAGCGGGATTGTGTTTACTTCATGCACGAGAAGTGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTGGATAGAGTTGTGTTGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGGTTATCGGTGTTTATTGTAGTTTTTTGTCCCTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AA751397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAATGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACNCCNGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_12584#0
GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCG
TCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCAT
AAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGA
CCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCC
CGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCT
TCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGC
TGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCT
ACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCG
TCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGC
TGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGC
GCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGCGGCGGCGCTCCCCTGGTGG
TGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGA
CCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACG
TCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCG
TCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACC
TGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGA
CCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCG
CCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACG
GGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACT
TCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATA
ACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCT
GGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTT
TCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATT
TAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTG
TCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTT
TTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGG
TGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGC
TCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCT
TTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTG
ACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTT
CCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACA
TCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAG
CTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGG
CTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCA
GTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAG
CAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACG
TGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCT
CACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCA
AGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGC
TAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTG
GCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGA
TAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCC
CTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTT
TCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGAT
TGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAA
TTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT

consensusID : consensus_12584#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 388
fasta sequence

                              [GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACTNCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT]

[+] EMBL AA752030             [GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACTNCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT]




>consensus_12584#1
GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACTNCATGCACGAGAAGCGGAC
ATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGT
CGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTG
CCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTT
TTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTTTAGTTGCTCTGGGTGAATG
ATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTGTCACACAATCACATGCATT
TTCCATTATGTTTAATAAAATTTAATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12584#0      GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCG 60
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCAT 120
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      AAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGA 180
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCC 240
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCT 300
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGC 360
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCT 420
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      ACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCG 480
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGC 540
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGC 600
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      GCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGCGGCGGCGCTCCCCTGGTGG 660
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGA 720
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACG 780
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCG 840
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACC 900
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGA 960
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCG 1020
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACG 1080
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      GGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACT 1140
consensus_12584#1      -------------------GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACT 41
                                          *  ** * * **     *  * ** *** ***** ******

consensus_12584#0      TCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATA 1200
consensus_12584#1      NCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATA 101
                        ***********************************************************

consensus_12584#0      ACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCT 1260
consensus_12584#1      ACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCT 161
                       ************************************************************

consensus_12584#0      GGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTT 1320
consensus_12584#1      GGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTT 221
                       ************************************************************

consensus_12584#0      TCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATT 1380
consensus_12584#1      TCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTT 281
                       ********************************** ********************** **

consensus_12584#0      TAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTG 1440
consensus_12584#1      TAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTG 341
                       **************************************** * *****************

consensus_12584#0      TCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTT 1500
consensus_12584#1      TCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT------------- 388
                       ***********************************************             

consensus_12584#0      TTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGG 1560
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGC 1620
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCT 1680
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTG 1740
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      ACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTT 1800
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACA 1860
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAG 1920
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGG 1980
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCA 2040
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      GTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAG 2100
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACG 2160
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCT 2220
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCA 2280
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      AGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGC 2340
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTG 2400
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      GCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGA 2460
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCC 2520
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      CTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTT 2580
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGAT 2640
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAA 2700
consensus_12584#1      ------------------------------------------------------------
                                                                                   

consensus_12584#0      TTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT 2751
consensus_12584#1      ---------------------------------------------------