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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1260 cluster # 1260       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1260#0 length = 827 sequences # 2  

consensusID : consensus_1260#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 827
fasta sequence
                              [CCTTTTTTTTTTTTTTTTTTTTCAAACTAATTCCTTTCAAAACATGGCAAGAAGCCGAAAAACTTACAAGGTTTACAATAGGAACCGAAAAACAAACTACAAAACTAAAAACTACTGGGAAACTACAAGGTTTGAAACACTGCATTTCAGGGAAAATGTTAAAATTCTAATTTTCTAGCTACATCACAATAAAAACATCTCTAGTATCTTCAAAAAAAACAAGACAAAAGTTCAAAGGTCTTCTTCTAAAATCAATTAATCTCCATTGGCAACACATCATGGGGCTTCAACAAAACCACACCCGATTCAAAAACTTGTAATCGATGACTTGCAACATCGCCGCCACCGCTGGCCGCCTAGCGCCGCCGCACCACCTCGCCGCTTCGCCTTCGCACCAGCGCCGCCGCCACGCGCCGCTGAGCCGCTTGCTAGCTTGGATTCTGACTTAAAGGCGTTCAGTCATAATCCGGCACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGTGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGGCACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCC-AGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTACTNTTCTGACACTCTAGCTNCAAACTCCGAGGTCTAAAGATCGGTAGGCACGGTTTACGGTCGAAT]

[+] EMBL CB658080             [CCTTTTTTTTTTTTTTTTTTTTCAAACTAATTCCTTTCAAAACATGGCAAGAAGCCGAAAAACTTACAAGGTTTACAATAGGAACCGAAAAACAAACTACAAAACTAAAAACTACTGGGAAACTACAAGGTTTGAAACACTGCATTTCAGGGAAAATGTTAAAATTCTAATTTTCTAGCTACATCACAATAAAAACATCTCTAGTATCTTCAAAAAAAACAAGACAAAAGTTCAAAGGTCTTCTTCTAAAATCAATTAATCTCCATTGGCAACACATCATGGGGCTTCAACAAAACCACACCCGATTCAAAAACTTGTAATCGATGACTTGCAACATCGCCGCCACCGCTGGCCGCCTAGCGCCGCCGCACCACCTCGCCGCTTCGCCTTCGCACCAGCGCCGCCGCCACGCGCCGCTGAGCCGCTTGCTAGCTTGGATTCTGACTTAAAGGCGTTCAGTCATAATCCGGCACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGTGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGGCACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCC AGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT                                                                   ]
[+] EMBL AU163301             [                                                                                                                                                                                                                                                                                                                                                                                                                          GCGCAG  GCGGCGCTTGCTAGCTTGGATTCTNACTTAGAGGCGTTCAGTCATAATCCGACACACGGTAGCTTCGCGCCACTGGCTTTTCAACCAAGNGCGATGACCAATTGTGTGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATCGCGGCACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAACCCCAAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCANAAAG AACGTCGCTATG ACGNTTGGTTG CACAAG CAGTTATCCCTGTGGTACTNTTCTGACACTCTAGCTNCAAACTCCGAGGTCTAAAGATCGGTAGGCACGGTTTACGGTCGAAT]


>consensus_1260#0 CCTTTTTTTTTTTTTTTTTTTTCAAACTAATTCCTTTCAAAACATGGCAAGAAGCCGAAA AACTTACAAGGTTTACAATAGGAACCGAAAAACAAACTACAAAACTAAAAACTACTGGGA AACTACAAGGTTTGAAACACTGCATTTCAGGGAAAATGTTAAAATTCTAATTTTCTAGCT ACATCACAATAAAAACATCTCTAGTATCTTCAAAAAAAACAAGACAAAAGTTCAAAGGTC TTCTTCTAAAATCAATTAATCTCCATTGGCAACACATCATGGGGCTTCAACAAAACCACA CCCGATTCAAAAACTTGTAATCGATGACTTGCAACATCGCCGCCACCGCTGGCCGCCTAG CGCCGCCGCACCACCTCGCCGCTTCGCCTTCGCACCAGCGCCGCCGCCACGCGCCGCTGA GCCGCTTGCTAGCTTGGATTCTGACTTAAAGGCGTTCAGTCATAATCCGGCACACGGTAG CTTCGCGCCACTGGCTTTTCAACCAAGCGCGATGACCAATTGTGTGAATCAACGGTTCCT CTCGTACTAGGTTGAATTACTATCGCGGCACGGTCATCAGTAGGGTAAAACTAACCTGTC TCACGACGGTCTAATCCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGG TGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTACTNTTCTGACACTCTAGCT NCAAACTCCGAGGTCTAAAGATCGGTAGGCACGGTTTACGGTCGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)