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Oryza sativa
cluster # 12603 cluster # 12603       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12603#0 length = 1262 sequences # 10  
consensus_12603#1 length = 714 sequences # 1  

consensusID : consensus_12603#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1262
fasta sequence
                              [ACTTGTGACGAGTAGTCCACTGACTAGGGTAGACAGTACTAGGACGAGGCAACAGCGACTGCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC-GCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA-CGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCTCCCTCGACCTCATGGAGCTCGACCTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTCCGAC-TTCGCCGCCAAGGGCCTCCCCCTCAATATCCTCATCAACAATGCAGGGGTGATGGCAACTCCTTTCTCTCTCTCAAAGGATGGTATCGAGTTGCAATTTGCCACTAACCATGTTGGTCATTTTCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCCTCAAAAAAAAAAAAA]

[+] EMBL AK061532             [ACTTGTGACGAGTAGTCCACTGACTAGGGTAGACAGTACTAGGACGAGGCAACAGCGACTGCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC GCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA CGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCTCCCTCGACCTCATGGAGCTCGACCTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTCCGAC TTCGCCGCCAAGGGCCTCCCCCTCAATATCCTCATCAACAATGCAGGGGTGATGGCAACTCCTTTCTCTCTCTCAAAGGATGGTATCGAGTTGCAATTTGCCACTAACCATGTTGGTCATTTTCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTG                                              ]
[+] EMBL AU166716             [                                                        GACTGCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC GCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA CGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCTCCCTCGACCTCATGGAGCTCGACCTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTCCGAC TTCGCCGCCAAGGGCCTCCCCCTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU068011             [                                                        GACTGCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTTCTTGGTNGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC GCCGCCGGNCTCACCGCCATCGTNACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA CGTCGTCATGGGCGTCCGCAACCTCGCCGCCGCGCA NCCGTNCGCGACGCCATCCTCGCCGACGCCCCTGNCGCCTCCCTNGACCTCATGGAGCTCGACNTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTNCGAC TTCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK058687             [                                                                       CCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC GCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA CGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCTCCCTCGACCTCATGGAGCTCGACCTCGCCTCCAT GACTCCGTCCGCGCCTTCGCCTCCGAC TTCGCCGCCAAGGGCCTCCCCCTCAATATCCTCATCAACAATGCAGGGGTGATGGCAACTCCTTTCTCTCTCTCAAAGGATGGTATCGAGTTGCAATTTGCCACTAACCATGTTGGTCATTTTCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCG                             ]
[+] EMBL AU184412             [                                                                                              GCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCCTGCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACACCGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGACGCCTCCCTCGACCTAATGGAGCTCGACCTNGNCTCCATGGACTTCGACCGCGCCTTNGCCTCCGACTTTCGCCGCCAAGGGCCTNCCCTTGAATATCCTTATCAACANTGCAGGGGCGATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU173332             [                                                                                              GCGGAGAGAGAGATTGATGATGTCTTCTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAGTCACCGCCGGGCTCTCC GCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCATCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACA CGTCGTCATGGCCGTCCGCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCNTGCCGTCTCCCTCGACCTCATGGANCTCGACCTCGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU068012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGGAAGAATCGTTAATGNTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGNCGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGNAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCGAATCT   TCCTCCTCAAAAA        ]
[-] EMBL AA752170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gcAGATT  AGGA G NGGT TNAA ATAAC GC AATT TTNTNAT CNGGAT TATCNTCACGGACCTTATT GTCACNAC GTATCCTAGATGTTNTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGNTCAGCA GGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCAAAAAAAAAAAAAAAA]
[+] EMBL AU173333             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACGAACCTTCTTCGTCACCNCAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCCTCAAAAAAAA     ]
[+] EMBL AU184413             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCCTCAAAAAAAA     ]


>consensus_12603#0 ACTTGTGACGAGTAGTCCACTGACTAGGGTAGACAGTACTAGGACGAGGCAACAGCGACT GCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTT CTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAG TCACCGCCGGGCTCTCCGCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCA TCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACACGTCGTCATGGCCGTCC GCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCT CCCTCGACCTCATGGAGCTCGACCTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTCCG ACTTCGCCGCCAAGGGCCTCCCCCTCAATATCCTCATCAACAATGCAGGGGTGATGGCAA CTCCTTTCTCTCTCTCAAAGGATGGTATCGAGTTGCAATTTGCCACTAACCATGTTGGTC ATTTTCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATG TGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCA TCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGT CAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTG TCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACC ACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGC AGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGA AGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGG CCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCA TGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAAT TGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAA CATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCCTCAAAAAAAAAAA AA



consensusID : consensus_12603#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 714
fasta sequence
                              [ATGTTGGTCATTTNCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU068664             [ATGTTGGTCATTTNCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAACATGATACTAGTAGTGAGTAATAAGCAAAAAAAAAAAAAAAAAAA]


>consensus_12603#1 ATGTTGGTCATTTNCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTG AATCAAATGTGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATC GGGAAGGCATCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCAT ATGGGCAGTCAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGG ATGAGGGTGTCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTC TTCGTCACCACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAA ATGCTCAGCAGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTG TGTCCGGGAAGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACA TGGAGCTGGCCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGA CCTGATTCATGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGT AAAGTAAATTGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACA TCAAACCAACATGATACTAGTAGTGAGTAATAAGCAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12603#0      ACTTGTGACGAGTAGTCCACTGACTAGGGTAGACAGTACTAGGACGAGGCAACAGCGACT 60
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      GCGTTGTCCCACCCACACATCTTGCGGTTGCGCGGCGGAGAGAGAGATTGATGATGTCTT 120
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      CTTGGTTGTTCCGGCGGAGTGGGCCCTCGGGCTTCTCGTGGGCCTCCACCGCCGACCAAG 180
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      TCACCGCCGGGCTCTCCGCCGCCGGCCTCACCGCCATCGTCACCGGCGCCTCCAGCGGCA 240
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      TCGGCGCCGAGACGGCTCGCGTCCTCGCCATCCGCGGGGCACACGTCGTCATGGCCGTCC 300
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      GCAACCTCGCCGCCGCGCAGCCCGTGCGCGACGCCATCCTCGCCGACGCCCCTGCCGCCT 360
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      CCCTCGACCTCATGGAGCTCGACCTCGCCTCCATGGACTCCGTCCGCGCCTTCGCCTCCG 420
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      ACTTCGCCGCCAAGGGCCTCCCCCTCAATATCCTCATCAACAATGCAGGGGTGATGGCAA 480
consensus_12603#1      ------------------------------------------------------------
                                                                                   

consensus_12603#0      CTCCTTTCTCTCTCTCAAAGGATGGTATCGAGTTGCAATTTGCCACTAACCATGTTGGTC 540
consensus_12603#1      ---------------------------------------------------ATGTTGGTC 9
                                                                          *********

consensus_12603#0      ATTTTCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATG 600
consensus_12603#1      ATTTNCTTTTGACTCATCTTCTCTTGGAGACAATGAAAAAGACCTCTCGTGAATCAAATG 69
                       **** *******************************************************

consensus_12603#0      TGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCA 660
consensus_12603#1      TGGAAGGAAGAATCGTTAATGTTTCATCAGAGGGGCACAGGTTTGCATATCGGGAAGGCA 129
                       ************************************************************

consensus_12603#0      TCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGT 720
consensus_12603#1      TCCGCTTTGCCAAGATAAATGACGAGTCGGAGTACAACTCCATTGGAGCATATGGGCAGT 189
                       ************************************************************

consensus_12603#0      CAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTG 780
consensus_12603#1      CAAAGCTTGCAAACATTTTGCATGCGAATGAACTTGCTAGGAGATTTAAGGATGAGGGTG 249
                       ************************************************************

consensus_12603#0      TCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACC 840
consensus_12603#1      TCAACATAACTGCAAATTCTCTTCATCCTGGATCTATCATCACGAACCTTCTTCGTCACC 309
                       ************************************************************

consensus_12603#0      ACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGC 900
consensus_12603#1      ACAGTATCCTAGATGTTCTCCATCGGACACTTGGTAAATTGGTGCTTAAAAATGCTCAGC 369
                       ************************************************************

consensus_12603#0      AGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGA 960
consensus_12603#1      AGGGGGCGGCCACCACTTGTTATGTTGCATTGCACCCACAGGTGAAGGGTGTGTCCGGGA 429
                       ************************************************************

consensus_12603#0      AGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGG 1020
consensus_12603#1      AGTACTTCAGTGACAGCAATGTGAACGAGGCGAGTGAGAAAGGCAATGACATGGAGCTGG 489
                       ************************************************************

consensus_12603#0      CCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCA 1080
consensus_12603#1      CCAAGAGGCTGTGGGAGTACAGCATCGAGCTCATCACCTGACCTGACCTGACCTGATTCA 549
                       ************************************************************

consensus_12603#0      TGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAAT 1140
consensus_12603#1      TGAACTGAATGAGAGATACTATGTAATGTTGAAGTTTGAGAGAGTGCCTGTAAAGTAAAT 609
                       ************************************************************

consensus_12603#0      TGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAA 1200
consensus_12603#1      TGTGGTAACTTAACTATGGCAGCTACCATCTGGTGTGCGTGCGTACGTACATCAAACCAA 669
                       ************************************************************

consensus_12603#0      CATGATACTAGTAGTGAGTAATAAGCATATGCGAATCTTCCTCCTCCTCAAAAAAAAAAA 1260
consensus_12603#1      CATGATACTAGTAGTGAGTAATAAGCAAAAAAAAA--------------AAAAAAAAAA- 714
                       *************************** *    **              ********** 

consensus_12603#0      AA 1262
consensus_12603#1      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)