These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12628#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2847 fasta sequence [CGCAGCCGCCTCCCTTTGTTCGCGCCCACTTCCAGCCAGGCCACCGCCGCCGCCGCCGACCGAAGCAGCCGACGGCGACCACCGCCGCGGCGAGGGATCGGTGCGTAAGCTTGGCGGCGGGCCGCTCCGCACGCGGGAGGGATCGCCGTAGCCGCCCTTCCCCCCACCCTCTACACCCCCTCGCCGGCGGCGAACACGGCGCGCGATGGGAGGCGCGCGCGCGCAGGTGAACAAGCCGCACAAGACACGCTTCGCCTCCAAGGCGTCGCGCCACGCGCACAAGATCGATAAGGTCAGGACCGGGAAGCCGGAGGGCAGCCACCGCGCCGCCGTCAAGGGGGCCCGCGCCGCGCGCGTCCAGCGGAGCAAGGCGATCCGTGATCAGAAACGTGCTGCTTTGCTGAAGGAGAAGCGCTCTTCCGTTGGATCTTCGAGTGCGCCCCGTGTCGTTGTTCTTTTTGGCCTTTCCTCGTCGGCAAATGTCAGATCACTTGCCAAAGACCTTTTAACCATTGCTTCTGGTGATGAAGAGAAACCAACTTCTTCCACTGTTGCTTCTCCTACATATAAACTTCGAACCACGGTACTTGAAGCACCTTATGGTGATCTTACATCATGCATGGAACTGGCAAAGGTTGCTGATTTGCTAGCATTTGTACTATCAGCAAATTCATTATACGATTGTGATTCGAGCAGTCCAATTGATGATTTTGGATCACAATGCTTGTCTGTTTTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCTTCCATCAGAAAACAAAAGTAGGCAGGAATTGAAGAAAACAGCTATTTCTTTTGTTTCTCCAGAGCTACCTGAGGATTGCAAGTTCTATGCAGCTGACACAAAGGATGATTTGCACAAGTTCATGTGGCTTTTCAAGGAGCAGCACCTTTCATGTCCACATTGGAGAAACCAGAGGCCTTATGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCTTATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGGTGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGAGAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAGTGGTATTCAGATTGTTGACACCTTTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTGAAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAACAGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAATGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGGTATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACGATGAAAATTTGACCAAAGAGCAGATAGAGGCAGAGATTAAGAAAATAAAAGAAGCTAACGCTGAAGACGAAGAATTTCCCGATGAGGTGGAGACACCCTTAGATGTCCCAGCAAAAAGGCGATTTGCAAAATACAGAGGGCTAAAGTCATTTAGGACATCATCCTGGGATCCAAAGGAATCACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGCATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAGGATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTCATCCATCAAGGAGATTGCCTGTGGTTGTTTCTGGTCTTCTTCAACATGAGTCAAAAATATCGGTTCTCCATTTCAGCATAAAGAAACATGACTCCTATGAAGCTCCTATCAAATCAAAGGACTCCTTAATTTTCAATGTTGGGTTCCGGCAGTTTACTGCTAGGCCATTGTTTTCAACTGACAACATCAATTGCAATAAGCATAAGATGGAGAGGTTTCTACATCATGGGCGGTTTTCTGTTGCCTCTGTATATGCTCCAATTTGCTTTCCTCCACTCCCTCTTATTGTTCTAAAGAGCAGAGATGGGGAGCAGCCTGCCATTGCTGCTGTTGGTTCACTGAAAAGTGTGGATCCGGACCGGATTATTCTT-AAGAAAATTGTTTT-GACTGGTTATCCTCAACGGGTCTCAAAACTGAAA-GCA-GTAGTGCGATACATGTTCCACA-ATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATGAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCAACAACGACATGTAGTTAGCTGTATTCGGTATGTTAACATTTGTTTTACGTTAACAGGTATGATTTTTGGTTTTTGCTGATTTTCGGCGTGCTTTCATCCGCATTTGTGATTGATTGACCGGTAATTCAAGCTGCAATGTTACAAAA] [+] EMBL CF326010 [CGCAGCCGCCTCCCTTTGTTCGCGCCCACTTCCAGCCAGGCCACCGCCGCCGCCGCCGACCGAAGCAGCCGACGGCGACCACCGCCGCGGCGAGGGATCGGTGCGTAAGCTTGGCGGCGGGCCGCTCCGCACGCGGGAGGGATCGCCGTAGCCGCCCTTCCCCCCACCCTCTACACCCCCTCGCCGGCGGCGAACACGGCGCGCGATGGGAGGCGCGCGCGCGCAGGTGAACAAGCCGCACAAGACACGCTTCGCCTCCAAGGCGTCGCGCCACGCGCACAAGATCGATAAGGTCAGGACCGGGAAGCCGGAGGGCAGCCACCGCGCCGCCGTCAAGGGGGCCCGCGCCGCGCGCGTCCAGCGGAGCAAGGCGATCCGTGATCAGAAACGTGCTGCTTTGCTGAAGGAGAAGCGCTCTTCCGTTGGATCTTCGAGTGCGCCCCGTGTCGTTGTTCTTTTTGGCCTTTCCTCGTCGGCAAATGTCAGATCACTTGCCAAAGACCTTTTAACCATTGCTTCTGGTGATGAAGAGAAACCAACTTCTTCCACTGTTGCTTCTCCTACATATAAACTTCGAACCACGGTACTTGAAGCACCTTATGGTGATCTTACATCATGCATGGAACTGGCAAAGGTTGCTGATTTGCTAGCATT ] [+] EMBL CF325537 [CGCAGCCGCCTCCCTTTGTTCGCGCCCACTTCCAGCCAGGCCACCGCCGCCGCCGCCGACCGAAGCAGCCGACGGCGACCACCGCCGCGGCGAGGGATCGGTGCGTAAGCTTGGCGGCGGGCCGCTCCGCACGCGGGA ] [+] EMBL CF325102 [CGCAGCCGCCTCCCTTTGTTCGCGCCCACTTCCAGCCAGGCCACCGCCGCC ] [+] EMBL AK068577 [ CCACTTCCAGCCAGGCCACCGCCGCCGCCGCCGACCGAAGCAGCCGACGGCGACCACCGCCGCGGCGAGGGATCGGTGCGTAAGCTTGGCGGCGGGCCGCTCCGCACGCGGGAGGGAGCGCCGTAGCCGCCCTTCCCCCCACCCTCTACACCCCCTCGCCGGCGGCGAACACGGCGCGCGATGGGAGGCGCGCGCGCGCAGGTGAACAAGCCGCACAAGACACGCTTCGCCTCCAAGGCGTCGCGCCACGCGCACAAGATCGATAAGGTCAGGACCGGGAAGCCGGAGGGCAGCCACCGCGCCGCCGTCAAGGGGGCCCGCGCCGCGCGCGTCCAGCGGAGCAAGGCGATCCGTGATCAGAAACGTGCTGCTTTGCTGAAGGAGAAGCGCTCTTCCGTTGGATCTTCGAGTGCGCCCCGTGTCGTTGTTCTTTTTGGCCTTTCCTCGTCGGCAAATGTCAGATCACTTGCCAAAGACCTTTTAACCATTGCTTCTGGTGATGAAGAGAAACCAACTTCTTCCACTGTTGCTTCTCCTACATATAAACTTCGAACCACGGTACTTGAAGCACCTTATGGTGATCTTACATCATGCATGGAACTGGCAAAGGTTGCTGATTTGCTAGCATTTGTACTATCAGCAAATTCATTATACGATTGTGATTCGAGCAGTCCAATTGATGATTTTGGATCACAATGCTTGTCTGTTTTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCTTCCATCAGAAAACAAAAGTAGGCAGGAATTGAAGAAAACAGCTATTTCTTTTGTTTCTCCAGAGCTACCTGAGGATTGCAAGTTCTATGCAGCTGACACAAAGGATGATTTGCACAAGTTCATGTGGCTTTTCAAGGAGCAGCACCTTTCATGTCCACATTGGAGAAACCAGAGGCCTTATGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCTTATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGGTGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGAGAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAGTGGTATTCAGATTGTTGACACCTTTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTGAAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAACAGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAATGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGGTATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACGATGAAAATTTGACCAAAGAGCAGATAGAGGCAGAGATTAAGAAAATAAAAGAAGCTAACGCTGAAGACGAAGAATTTCCCGATGAGGTGGAGACACCCTTAGATGTCCCAGCAAAAAGGCGATTTGCAAAATACAGAGGGCTAAAGTCATTTAGGACATCATCCTGGGATCCAAAGGAATCACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGCATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAGGATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTCATCCATCAAGGAGATTGCCTGTGGTTGTTTCTGGTCTTCTTCAACATGAGTCAAAAATATCGGTTCTCCATTTCAGCATAAAGAAACATGACTCCTATGAAGCTCCTATCAAATCAAAGGACTCCTTAATTTTCAATGTTGGGTTCCGGCAGTTTACTGCTAGGCCATTGTTTTCAACTGACAACATCAATTGCAATAAGCATAAGATGGAGAGGTTTCTACATCATGGGCGGTTTTCTGTTGCCTCTGTATATGCTCCAATTTGCTTTCCTCCACTCCCTCTTATTGTTCTAAAGAGCAGAGATGGGGAGCAGCCTGCCATTGCTGCTGTTGGTTCACTGAAAAGTGTGGATCCGGACCGGATTATTCTT AAGAAAATTGTTTT GACTGGTTATCCTCAACGGGTCTCAAAACTGAAA GCA GTAGTGCGATACATGTTCTACA ATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATCAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCAACAACGACATGTAGT ] [+] EMBL CB630972 [ CAGCCACCGCGCCGCCGTCAAGGGGGCCCACGCCGCGCGCGTCCAGCGGAGCAAGGCGATCCGTGATCAGAAACGTGCTGCTTTGCTGAAGGAGAAGCGCTCTTCTGTTGGATCTTCGAGTGCGCCCCGTGTCGTTGTTCTTTTTGGCCTTTCCTCGTCGGCAAATGTCAGATCACTTGCCAAAGACCTTTTAACCATTGCTTCTGGTGATGAAGAGAAACCAACTTCTTCCACTGTTGCTTCTCCTACATATAAACTTCGAACCACGGTACTTGAAGCACCTTATGGTGATCTTACATCATGCATGGAACTGGCAAAGGTTGCTGATTTGCTAGCATTTGTACTATCAGCAAATTCATTATACGATTGTGATTCGAGCAGTCCAATTGATGATTTTGGATCACAATGCTTGTCTGTTTTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCTTCCATCAGAAAACAAAAGTAGGCAGGAATTGAAGAAAACAGCTATTTCTTTTGTTTCTCCAGAGCTACCTGAGGATTGCAAGTTCTATGCAGCTGACACAAAGGATGATTTGCACAAGTTCATGTGGCTTTTCAAGGAGCAGCACCTTTCATGTCCACATTGGAGAAACCAGAGGCCTTATGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCTTGTGTCTGGATATTTACGCGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGGTGGTGGTGATTTTCAGTTGGGTCAAAT ] [-] EMBL CB660049 [ CGGTTCTCCATTTCAGCATAAAGAAACATGACTCCTATGAAGCTCCTATCAAATCAAAGGACTCCTTAATTTTCAATGTTGGGTTCCGGCAGTTTACTGCTAGGCCATTGTTTTCAACTGACAACATCAATTGCAATAAGCATAAGATGGAGAGGTTTCTACATCATGGGCGGTTTTCTGTTGCCTCTGTATATGCTCCAATTTGCTTTCCTCCACTCCCTCTTATTGTTCTAAAGAGCAGAGATGGGGAGCAGCCTGCCATTGCTGCTGTTGGTTCACTGAAAAGTGTGGATCCGGACCGGATTATTCTT AAGAAAATTGTTTT GACTGGTTATCCTCAACGGGTCTCAAAACTGAAA GCA GTAGTGCGATACATGTTCTACA ATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATCAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCAACAACGACATGTAGTTAGCTGTATTCGGTATGTTAACATTTGTTTTACGTTAACAGGTATGATTTTTGGTTTTTGCTGATTTTCG ] [-] EMBL CB630973 [ GTTGGGTTCCGGCAGTTTACTGCTAGGCCATTGTTTTCAACTGACAACATCAATTGCAATAAGCATAAGATGGAGAGGTTTCTACATCATGGGCGGTTTTCTGTTGCCTCTGTATATGCTCCAATTTGCTTTCCTCCACTCCCTCTTATTGTTCTAAAGAGCAGAGATGGGGAGCAGCCTGCCATTGCTGCTGTTGGTTCACTGAAAAGTGTGGATCCGGACCGGATTATTCTT AAGAAAATTGTTTT GACTGGTTATCCTCAACGGGTCTCAAAACTGAAA GCA GTAGTGCGATACATGTTCCACA ATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATGAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCAACAACGACATGTAGTT ] [+] EMBL BM419632 [ CTTAAAGAAAATTGTTTTGGACTGGTNAT CTCAACGGNTCTCAAAACTGAAA CCA TTAGTGCGATACATGTTCCACA ATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATGAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCAACAtgtagt ] [+] EMBL BM418733 [ TCCTCAACGGGTCTCAAAACTGAAACGCATGTAGTGCGATACATGTTCCACATATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGTTGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTATGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACAAACGCGCTTACCCCTAATGGCCAGAACAGCTCTACCAGATATGATCATATGAGGGTCATGGATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGATGTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGTCA ACATGTAGTTAGCTGTATTCTGTANGTTAACATTTGTTTTACGTTAACAGCTATGATTTTTGATTTTTGCTGATTTTCGGCGTGCTTTCATCCGCATTTGTGATTGATTGACCGGTAATTCAAGCTGCAATGTTACAAAA] consensusID : consensus_12628#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 837 fasta sequence [GGCCTTATGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCTTATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGGTGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGAGAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAGTGGTATTCAGATTGTTGACACCTTTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTGAAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAACAGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAATGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGGTATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACGATGAAAATTTGACCAAAGGAATCACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGCATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAGGATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTCATCCATCAAGGAGATTGCCTGTGGTTGTT] [+] EMBL CB660048 [GGCCTTATGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCTTATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGGTGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGAGAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAGTGGTATTCAGATTGTTGACACCTTTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTGAAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAACAGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTGTGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAATGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGGTATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACGATGAAAATTTGACCAAAGGAATCACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGCATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAGGATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTCATCCATCAAGGAGATTGCCTGTGGTTGTT] consensusID : consensus_12628#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 202 fasta sequence [NCCCANNTTGAGCCCCGTACGNTGNGCCNTCCTGANTGCCGCCCATATATGTNTACTGGGGCTAGCGGAAAAAGANCCCCCTTGTCAACAACGNCATGTAGTTAGCTGTANNCTGTATGTTAACATTTGTTTTCCGTTAACAGCTATGATTTTTGATTTTTGCTGATTTTCGGCGTGCTTTCACCCGCATTTGTGATTGTTT] [+] EMBL D42812 [NCCCANNTTGAGCCCCGTACGNTGNGCCNTCCTGANTGCCGCCCATATATGTNTACTGGGGCTAGCGGAAAAAGANCCCCCTTGTCAACAACGNCATGTAGTTAGCTGTANNCTGTATGTTAACATTTGTTTTCCGTTAACAGCTATGATTTTTGATTTTTGCTGATTTTCGGCGTGCTTTCACCCGCATTTGTGATTGTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12628#0 CGCAGCCGCCTCCCTTTGTTCGCGCCCACTTCCAGCCAGGCCACCGCCGCCGCCGCCGAC 60 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CGAAGCAGCCGACGGCGACCACCGCCGCGGCGAGGGATCGGTGCGTAAGCTTGGCGGCGG 120 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GCCGCTCCGCACGCGGGAGGGATCGCCGTAGCCGCCCTTCCCCCCACCCTCTACACCCCC 180 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TCGCCGGCGGCGAACACGGCGCGCGATGGGAGGCGCGCGCGCGCAGGTGAACAAGCCGCA 240 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CAAGACACGCTTCGCCTCCAAGGCGTCGCGCCACGCGCACAAGATCGATAAGGTCAGGAC 300 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CGGGAAGCCGGAGGGCAGCCACCGCGCCGCCGTCAAGGGGGCCCGCGCCGCGCGCGTCCA 360 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GCGGAGCAAGGCGATCCGTGATCAGAAACGTGCTGCTTTGCTGAAGGAGAAGCGCTCTTC 420 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CGTTGGATCTTCGAGTGCGCCCCGTGTCGTTGTTCTTTTTGGCCTTTCCTCGTCGGCAAA 480 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGTCAGATCACTTGCCAAAGACCTTTTAACCATTGCTTCTGGTGATGAAGAGAAACCAAC 540 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TTCTTCCACTGTTGCTTCTCCTACATATAAACTTCGAACCACGGTACTTGAAGCACCTTA 600 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGGTGATCTTACATCATGCATGGAACTGGCAAAGGTTGCTGATTTGCTAGCATTTGTACT 660 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATCAGCAAATTCATTATACGATTGTGATTCGAGCAGTCCAATTGATGATTTTGGATCACA 720 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATGCTTGTCTGTTTTTCGGGCCATGGGCTTACCTAGTACAGCTGTTTTCATTCGAGATCT 780 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TCCATCAGAAAACAAAAGTAGGCAGGAATTGAAGAAAACAGCTATTTCTTTTGTTTCTCC 840 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 AGAGCTACCTGAGGATTGCAAGTTCTATGCAGCTGACACAAAGGATGATTTGCACAAGTT 900 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CATGTGGCTTTTCAAGGAGCAGCACCTTTCATGTCCACATTGGAGAAACCAGAGGCCTTA 960 consensus_12628#1 -----------------------------------------------------GGCCTTA 7 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCT 1020 consensus_12628#1 TGTTATGTCTGAGGAGGCCTGCATAAAACCTGATGACAGTTCAGGGCTGTGCACATTGCT 67 consensus_12628#2 ---------------------------NCCCANNTTGAGCCCCGTACGNTGNGCCNTCCT 33 ** ** * * * ** * * ** consensus_12628#0 TATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGG 1080 consensus_12628#1 TATGTCTGGATATTTACGTGCCCACAATCTTTCTGTCAACCAGCTTGTCCATCTGTCAGG 127 consensus_12628#2 GANTGCCGCCCATATATGTNTACTGGGGCTAGCGGAAAAAGANC----CCCCTTGTCAA- 88 * * * ** ** ** * ** * * ** * * ** ***** consensus_12628#0 TGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGA 1140 consensus_12628#1 TGTTGGTGATTTTCAGTTGGGTCAAATTGATATCCTCAAGGATCCTTTTCCTATTAATGA 187 consensus_12628#2 ---CAACGNCATGTAGTTAGCTGTANNCTGTATGTT--AACATTTGTTTTCCGTTAACA- 142 * * **** * * * *** * * ** *** * **** consensus_12628#0 GAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAG-TGGTATTCAGATTGTTGACACCT 1199 consensus_12628#1 GAGGAAAAACTCCAATGCCATGGTTTCTGAAGATAG-TGGTATTCAGATTGTTGACACCT 246 consensus_12628#2 ----------------GCTATGATTTTTGATTTTTGCTGATTTTCGGCGTGCTTTCACCC 186 ** *** *** *** * * ** * *** * ** * **** consensus_12628#0 TTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTG 1259 consensus_12628#1 TTGTTCCAGACCCTTCAAGTCAAGAGCCTTTGCTTGTTGAAAACACCCCAGATCCACTTG 306 consensus_12628#2 GCATTTGTGATTGTTT-------------------------------------------- 202 ** ** ** consensus_12628#0 AAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAAC 1319 consensus_12628#1 AAGGGGAGCAGACTTGGCCGACAGAAGCTGAGATGGAAGAAGCCTATTTGAACAACAAAC 366 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 AGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTG 1379 consensus_12628#1 AGAGAAAGCTAAAAAGAAAGCTTCCTCGAGGCACTTCAGAATACCAGGCTGCTTGGATTG 426 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAA 1439 consensus_12628#1 TGGATGATACAGATGATGAAGATGGTGATTCTGAGAACGACAACCAGGATGGTGCTGGAA 486 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGG 1499 consensus_12628#1 TGGTTATAGATGAGCAAGATCACTCAGACAATGGAGGTGATGGTTCAGATATGGATGTGG 546 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACG 1559 consensus_12628#1 TATCTCACTTTACGGAGAAATTTGATGAAGAAACAATTGGGGGTACCGAGATGGCAGACG 606 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATGAAAATTTGACCAAAGAGCAGATAGAGGCAGAGATTAAGAAAATAAAAGAAGCTAACG 1619 consensus_12628#1 ATGAAAATTTGACCAAAG------------------------------------------ 624 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CTGAAGACGAAGAATTTCCCGATGAGGTGGAGACACCCTTAGATGTCCCAGCAAAAAGGC 1679 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GATTTGCAAAATACAGAGGGCTAAAGTCATTTAGGACATCATCCTGGGATCCAAAGGAAT 1739 consensus_12628#1 --------------------------------------------------------GAAT 628 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGC 1799 consensus_12628#1 CACTGCCACAGGATTATGCAAGAATATTTGCATTCGATAACTTTACAAGAACACAAAAGC 688 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAG 1859 consensus_12628#1 ATGTTCTTGCTAAAATGGCAGAGCGAGATGAAGGAACCTTGAAGGATTGTGCTCAAAGAG 748 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTC 1919 consensus_12628#1 GATCATTTGTGAGGCTCCATCTGAAAAATGTTCCTACTGAGATTGCCTCAAAACTTGTTC 808 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATCCATCAAGGAGATTGCCTGTGGTTGTTTCTGGTCTTCTTCAACATGAGTCAAAAATAT 1979 consensus_12628#1 ATCCATCAAGGAGATTGCCTGTGGTTGTT------------------------------- 837 consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CGGTTCTCCATTTCAGCATAAAGAAACATGACTCCTATGAAGCTCCTATCAAATCAAAGG 2039 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ACTCCTTAATTTTCAATGTTGGGTTCCGGCAGTTTACTGCTAGGCCATTGTTTTCAACTG 2099 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ACAACATCAATTGCAATAAGCATAAGATGGAGAGGTTTCTACATCATGGGCGGTTTTCTG 2159 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TTGCCTCTGTATATGCTCCAATTTGCTTTCCTCCACTCCCTCTTATTGTTCTAAAGAGCA 2219 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GAGATGGGGAGCAGCCTGCCATTGCTGCTGTTGGTTCACTGAAAAGTGTGGATCCGGACC 2279 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GGATTATTCTTAAGAAAATTGTTTTGACTGGTTATCCTCAACGGGTCTCAAAACTGAAAG 2339 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CAGTAGTGCGATACATGTTCCACAATCCTGAAGATGTCAAGTGGTTTAAGCCTGTAGAGT 2399 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGTGGACGAAACATGGTCGACGTGGCCGAATCAAGGAGACTGTTGGCACTCATGGTGCTA 2459 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 TGAAATGCATATTCAATAGCAGCGTCCAGCAGCATGATACCGTGTGCATGAGCCTTTACA 2519 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 AACGCGCTTACCCCAAATGGCCAGAACAGCTCTACCAGATATGATCATATGAGGGTCATG 2579 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GATATGTGCTTGCACGTTGGCATGTACGTCTCAAAGTTTTGACAGATTGAGCTCATCGAT 2639 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 GTGCTTCCTGATGCAGCTCATATATGTATACTAGTGCTAGCAGAAAAAGAAACCTCATGT 2699 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CAACAACGACATGTAGTTAGCTGTATTCGGTATGTTAACATTTGTTTTACGTTAACAGGT 2759 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 ATGATTTTTGGTTTTTGCTGATTTTCGGCGTGCTTTCATCCGCATTTGTGATTGATTGAC 2819 consensus_12628#1 ------------------------------------------------------------ consensus_12628#2 ------------------------------------------------------------ consensus_12628#0 CGGTAATTCAAGCTGCAATGTTACAAAA 2847 consensus_12628#1 ---------------------------- consensus_12628#2 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||