These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 3603 fasta sequence [AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGTTCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCCCACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGAGCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGTCCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAGAGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCTCTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTCGCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG-CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAAGGA] [+] EMBL AK065913 [AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGTTCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCCCACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGAGCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGTCCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAGAGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCTCTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTCGCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGTTGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATGGCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTGGCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTGTTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACTCGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTGAAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGATTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCCCTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGTAACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGTGAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATAGAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCATGTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTAGAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAGATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACTGTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCT ] [+] EMBL CB641323 [ ATACTGTTCACATATGGAGCATGGCCAATGGCATATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTATCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTGACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTTTTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGAAACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTCTGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAAGACCGAACTATT ] [+] EMBL CF306387 [ TAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATTTATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAGCATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTATTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTCAAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGGATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATGCTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATATAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCAAAAAGGTTTCCAGTGTCCAGCAATTTCAATCA CCCCCCAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAGAAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAG ] [+] EMBL C28951 [ TAGCTG AANCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCATCAAGGTTTCCAGTGTCCAGCANTTTCANTCACCCCCCAAAAGTTTCTACAGATGCACCTAACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAG AGAAAACTGCAGGTT CACTGCTGATGACATAAATAAAAGACCTCGTTTATCTAGTNCAGTG AACAAAGNG ATACCGGCGT CTGAT ] [+] EMBL CB661014 [ TGCCTGCAGGTTTACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTTATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATATGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCAGC ] [+] EMBL AU197698 [ TGATTCTTTGGCTTCTTTGGTAACATCTCCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAGCCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTNTACTCAAGGTGGANAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGNGCAGAC ] [+] EMBL CA767480 [ TACAGTAAAGGTTATATCTGCTAAATTTT AAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCGGCCTGAAATGCTGGCTAAGGATAG CTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTTATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTAGAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGAGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACACCACCACCACCACCACCACCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTG ] [+] EMBL AU032327 [ CAGTAAAGGTTATATCTGCTANATTTTCAAGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTNGCCATGCTTNTCTTTATGACACCAGCCTGAAATGCTGGCTAAGGATAG CTGANGATTGCTTTCCAGCATCAAATTTTGCTAGCNCATTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATGGCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTNCAGACACGCTCCCATTTAGAGANCCAGCTGGCA CNTCATTGGCTTTGAAGTCTCCACAGGAAT TCGCCAATG ] [-] EMBL CB661015 [ TCATGGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTCTTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGTGAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAAAATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGATATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGACCTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGAGGTGACACCAACACCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAAGGA] [+] EMBL AU182022 [ CACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACNCCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTGCTTATGGGTTCAAAAAAaaa ] consensusID : consensus_12635#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence [CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTAAAAAAAAAA] [+] EMBL AU184783 [CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAGTTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTGCATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTAGCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAACAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGGCCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATGTCCTTTTTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12635#0 AGTTCGATTCGATTCGATTCGATTTCGTTTTCTCTCAGGAAGGAACACGAGCGGTTGGGT 60 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TCATCCCCCTCCTCGCCGTGTTCTTCGCTCCGCCGCCGGGCGCCGCCGGATCGGTCGCCC 120 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CACCCCCCCCCCGCCCCCTCCCTCCCGAAGCTTCTCGAACCTTCCTCCCCCCTACCAGGA 180 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GCCGTCCCGAGGCGGCCTAGGGTTCCCGCGGGCGGCCGCGCGATTTCTAGGGTTTTGGGT 240 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CCTTTGCTCGGGGCATGGGCCCTGCGGTTCGGCGGCAGTGACGAGCGGCAAGCCACCTAG 300 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AGGAGGAGATGATTACGGAGAAGCCGAGCTGGATTCGCCACGAGGGCCTGCAGATCTTCT 360 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CTATCGACATCCAGCCGGGCGGCATCCGCTTCGCCACCGGCGGCGGCGACCAGAAGATTC 420 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GCATATGGAGCATGAAATCAGTGGCCAAAGACAATGACAGTGATGATTCCAGCCAAAGGT 480 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TGCTGGCTACAATTCGAGACCATTTTGGAACAGTAAACTGTGTGAGATGGGCCCATCATG 540 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GCCGCTATCTTGCTTCAGGATCGGACGATCAAGTTATCCAAATTCATGAAAGAAAAGCTG 600 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GCACTGGAACATCTGAATTTGGAAGTGGAGAACCTCCAGATGTAGAAAACTGGAAGGTTG 660 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTATGACCTTAAGAGGGCATACTGCCGATGTGGTTGACCTTAATTGGTCCCCTGATGACT 720 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CGACATTGGCTAGCGGCAGTTTGGATAATACTGTTCACATATGGAGCATGGCCAATGGCA 780 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TATGCACTGCTGTCTTGCGAGGGCATTCCAGTTTAGTTAAAGGCGTTACATGGGATCCTA 840 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TCGGTTCTTTCATCGCAAGCCAATCAGATGACAAGACTGTTATCATATGGCGTACGAGTG 900 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 ACTGGAGTCTTGCTCACAGGACAGAAGGCCATTGGTCAAAATCGCTTGGTTCGACATTTT 960 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTAGGCGACTTGCTTGGTCTCCCTGTGGCCACTTCATAACCACAACTCATGGTTTTCAGA 1020 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AACCTAGGCACTCAGCCCCTGTGCTTGAACGGGGTGAATGGTCAGCAACCTTTGATTTTC 1080 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TGGGGCATAACGCACCTGTTGTAGTGGTTAAGTTTAACCACTCAATGTTCCGTAAGCATT 1140 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TATCTTCTGGCCAAGACGCAAAGGCTGCACCAGCTGGATGGGCCAATGGAGCATCAAAAG 1200 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CATCATCTAAAGAACATCAACCATATAATGTTATTGCTATTGGGAGTCAGGACCGAACTA 1260 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTACTGTCTGGACGACAGCGAGTGCCCGGCCATTGTTTGTTGCCAAGCATTTCTTCACTC 1320 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AAAGTGTGGTTGATTTATCTTGGAGTCCTGATGGCTATTCACTTTTTGCCTGCTCTTTGG 1380 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 ATGGTTCAGTTGCTACCTTTCACTTTGAAGCAAAGGAGCTTGGATACAGGTTAAGGGATG 1440 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CTGAACTGGATGAATTGAAGAAGAATAGATATGGCGATGTTAGAGGGAGGCAATCAAATA 1500 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TAGCTGAAAGCCCTGCTCAGTTACTGCTAGAAGAAGCATCGGCCAAACAATCTGCAAGCA 1560 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AAAAGGTTTCCAGTGTCCAGCAATTTCAATCACCCCCCCAAAGTTTCTACAGATGCACCT 1620 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AACCCGTCTACAAGCGTTCCAAATCAGAAAGCTCCTGAAGCTTTACCTGAAGATGAGAAG 1680 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AAAACTGCAGGTTCCACTGCTGATGACATAAATAAAGCACCTCGTTTATCTAGTCCAGTG 1740 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AAACAAAGAGAATACCGGCGTCCTGATGGCCGGAAAAGGATTATTCCAGAGGCAGTTGGA 1800 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTTCCTTCCAACCAGGACATGTCCAACCGTTCTCAGAATCAAGGTGTGGATTTTTCATCC 1860 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CTGGATCAGCGAATGATCCTTGGAGAGAATGGAACAAGACCATCTTATAGTGCTAGCGGT 1920 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AACTGTAATAATTGTGGAGTTAGGGAACGCTCTGGCATTACTGCAAGAACTAACATTAGT 1980 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GAGAGTCTTGTAATCCAAAAAGCTTCAGCTGGTGCTGGCAGTGATGGAAGGTTGAGCATA 2040 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GAACAGTCTGGATCTGTAGTTCCAGGCTCATTGGCCTCTTGCTCTTCACTTTCTATCCAT 2100 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GTATTCAATAAGAAAGACAATGAGGATTCTTTACCGGTCCGCCTTGAAGCAAAGCCTGTA 2160 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GAACGTTCTGCAGGAGACATGATTGGGCTTGGTGGTGCTTTTTCAACAAAAGAAACTGAG 2220 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 ATTACATGTACAAGAGGAACAGAAACTCTTTGGTCAGATCGCATCTCTGCCAAGGTGACT 2280 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GTCTTGGCTGGTAATGCGAATTTCTGGGCAGTTGGCTGTGAAGATGGTTGCCTGCAGGTT 2340 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TACACAAAATGTGGAAGGCGAGCAATGCCAGCGATGATGATGGGATCAGCAGCTGTTTTT 2400 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 ATAGACTGTGATGAGTGTTGGAAATTGCTTCTTGTAACAAGGAGGGGTTTGATGTACATA 2460 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TGGGACCTCTATACCAGGACTTGCGTTTTGCATGATTCTTTGGCTTCTTTGGTAACATCT 2520 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CCAGATGAGGCAGCTGGAAAAGATACCGGTACAGTAAAGGTTATATCTGCTAAATTTTCA 2580 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AGATGTGGCTCGCCCTTAGTTGTGCTTGCCAGTCGCCATGCTTTTCTTTATGACACCAGC 2640 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CTGAAATGCTGGCTAAGGATAGCTGATGATTGCTTTCCAGCATCAAATTTTGCTAGCTCA 2700 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTTAGTTCTACTCAAGGTGGAGAGCTAGGCAAGTTGCAGATCGATATAGGAAAATTCATG 2760 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GCTAGAAAGCCTATTTGGAGCAGGGTTACCGATGATGGGGTGCAGACACGCTCCCATTTA 2820 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GAGACCCAGCTGGCAGCTTCATTGGCTTTGAAGTCTCCACAGGAATATCGCCAATGCCTC 2880 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 TTATCCTACATAAGATTTCTGGCAAGAGAGGCAGATGAATCTCGTCTACGTGAAGTTTGT 2940 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 GAGAGCTTTCTTGGTCCTCCGATGGGCATGGTTGACGCTGCATCATCTGCTGATTTGAAA 3000 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 AATCCATCATGGGATCCTGATGTTCTTGGAATGAAGAAACACAAACTCCTAAGGGAAGAT 3060 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 ATACTACCTTCCATGGCTACGAACCGCAAGGTCCAACGGCTGTTAAACGAATTCATGGAC 3120 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CTCCTTTCGGAGTACGAGGCTGCTGAGACAAACGTCGAGCAAATGGACGTGACACCAACA 3180 consensus_12635#1 ------------------------------------------------------------ consensus_12635#0 CCACCACCACCACCACCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAG 3240 consensus_12635#1 -------CACCACCNCCAGCAGCAGCAACAGAAGGCAACAATAATGGTGCCTCATAGCAG 53 ******* ********************************************* consensus_12635#0 TTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTG 3300 consensus_12635#1 TTGGGATTGCTGGAGAATTATTACTGACACCCCCTTGGGTAAGCATAGGACAATCAAGTG 113 ************************************************************ consensus_12635#0 CATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTA 3360 consensus_12635#1 CATACAACATAGAACTATCATGTGTTTTGAGAATTGCCCATGGTTGATTAAATTTATGTA 173 ************************************************************ consensus_12635#0 GCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAA 3420 consensus_12635#1 GCTGCTAGAGCCTTTGTGTTCATCTTCTTCTTAATAGCAAAGGGTGAGACCTCAGCCAAA 233 ************************************************************ consensus_12635#0 CAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGG 3480 consensus_12635#1 CAACCCGTTAGTTGTAACGCGAGCAGAGTGTAACAGTAGAAAGAAAGCGAGCGAGGGAGG 293 ************************************************************ consensus_12635#0 CCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATG 3540 consensus_12635#1 CCTCCTGGTGATCGATTGTGTAACAGTAAATCTGTAGAAGGTCAGACGATTAACTTAATG 353 ************************************************************ consensus_12635#0 TCCTTTTTGCTTATGGATGCGCAAAAGGCAATGTTTTTGGGGTTTTTTTAAAAAAAAAAA 3600 consensus_12635#1 TCCTTTTTAAAAAAAAAA------------------------------------------ 371 ******** * * consensus_12635#0 GGA 3603 consensus_12635#1 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||