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Oryza sativa
cluster # 12641 cluster # 12641       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12641#0 length = 1381 sequences # 7  
consensus_12641#1 length = 1352 sequences # 4  

consensusID : consensus_12641#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1381
fasta sequence
                              [ATATTTCCCTCCACTTCGTCCTCTTCTTCCTCCTCCATCCCCATCCTCCATCGGATGCACTAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGCAGGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACTGAGATGTTGGTAATTAATTATCGNNTTTTGTAAAANTNAAA]

[+] EMBL AK105957             [ATATTTCCCTCCACTTCGTCCTCTTCTTCCTCCTCCATCCCCATCCTCCATCGGATGCACTAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGCAGGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACTGAGATGTTGGTAATTAATTAT                    ]
[+] EMBL AU032161             [                                                 ATCGGATGCACTAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGGCTCGCCAGCAAGCACCGNCGNCTCCCGCTCGTn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB641653             [                                                      ATGCACTAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGC   GGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AB001884             [                                                                                                                                                             GTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGCAGGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACTGAGATGTTGGTAATTAATTAT                    ]
[-] EMBL CB641654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGC   GGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCCCTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACGGAGATGTTGGTAATTAATTAT                    ]
[+] EMBL BI807446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGGCTCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCATCGTC CCGCGTC GCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAACCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCTAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATC AACTAAAa                                          ]
[+] EMBL AU101653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGNGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTNCTACTNGTTAATTTTGGNGAAAACTATGCTNCTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACTGAGATGTTGGTAATTAATTATCGNNTTTTGTAAAANTNAAA]


>consensus_12641#0 ATATTTCCCTCCACTTCGTCCTCTTCTTCCTCCTCCATCCCCATCCTCCATCGGATGCAC TAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCT CCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTG CAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCG CTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGC CGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCG CCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCC ATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCAC ACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTC CCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTAC CACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAAC GGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATC TGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCC GCGCAGGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGAC GTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTG CCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCCAGCGGCG ACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCG TTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCG CAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGAC GAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAG TAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTA CTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAG TATGTGTATCAAACTAAACTGAGATGTTGGTAATTAATTATCGNNTTTTGTAAAANTNAA A



consensusID : consensus_12641#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1352
fasta sequence
                              [TACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGGTGAGTACTACCAACCCATCGCTCCGCCGTGTTCTTGCTACGTCTCCATCGATGAAGCCGAGACTAACCTACGATTCCTTGGAGCAGCAGGCGGGGAAAGAGAAAGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCG-TCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTGGTTACTATATAATGAAGTATGTGTATCAAACTAAAAAAAAGG]

[+] EMBL CB644732             [TACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGGTGAGTACTACCAACCCATCGCTCCGCCGTGTTCTTGCTACGTCTCCATCGATGAAGCCGAGACTAACCTACGATTCCTTGGAGCAGCAGGCGGGGAAAGAGAAAGACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR14792A            [                                                                              TCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCAACCGCCGCGTNCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGNCTCCCGCTCGTCCACCCGTCCTNCTCCTCCTCTNGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAGNGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCAACGAGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB644733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGGTGAGTACTACCAACCCATCGCTCCGCCGTGTTCTTGCTACGTCTCCATCGATGAAGCCGAGACTAACCTACGATTCCTTGGAGCAGCAGGCGGGGAAAGAGAAGGACGAGCGCGTGCCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCG TCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTGGTTACTATATAATGAAGTATGTGTATCAAACTAAAAAAAAGG]
[+] EMBL AU162506             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGNGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAAAA     ]


>consensus_12641#1 TACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCTCCTCTCGCTGTCTGCCTTTG ACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTGCAGTGCGACGTCTGCGCCGC CGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCGCTCTGCTCCGCCTGCGACCG CCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGCCGCCTCCCGCTCGTCCACCC GTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCGCCGCTGTGCGACGTGTGCAG GGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCCATCCTGTGCGCCGACTGCGA CGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCACACCCGCTTCCTCCTCGTCGG CGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTCCCGTCCTCCGACTGCAGCTC CGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTACCACTCCTCCGCCGCATCCAC CGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAACGGCGCCGGTGGCGGAGGAGG AGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATCTGCCCCGGCTGGCGCGTCGA GGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCCGCGGTGAGTACTACCAACCC ATCGCTCCGCCGTGTTCTTGCTACGTCTCCATCGATGAAGCCGAGACTAACCTACGATTC CTTGGAGCAGCAGGCGGGGAAAGAGAAAGACGAGCGCGTGCCGTTCCTCGACGCCGACCT GTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGCGCGTGGGCGCCGCACGTGCC GCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTCGTCGCCGCGTCGGCGGCGCC AGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGGGACAGCCACTGGAGCGACAG CGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCGCCGGCCAAGAGGGCGCGGCC CAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCGTACAATCTGGCCGCCGGCGA GCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGTAATCACTCAGCTGGTCACTA CTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTACTAGCTGCTGCTGTTTAATTA GTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACTATGCTACTTGGTTACTATAT AATGAAGTATGTGTATCAAACTAAAAAAAAGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12641#0      ATATTTCCCTCCACTTCGTCCTCTTCTTCCTCCTCCATCCCCATCCTCCATCGGATGCAC 60
consensus_12641#1      ------------------------------------------------------------
                                                                                   

consensus_12641#0      TAGTAGCTGGCCTTGTACCCTACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCT 120
consensus_12641#1      --------------------TACCTAGCTTAGCTACCCACCCATGTCCTCCTCCTCGTCT 40
                                           ****************************************

consensus_12641#0      CCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTG 180
consensus_12641#1      CCTCTCGCTGTCTGCCTTTGACTTGGAGACCTAGCTCGTCGATCGCCGGCCATGCGGGTG 100
                       ************************************************************

consensus_12641#0      CAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCG 240
consensus_12641#1      CAGTGCGACGTCTGCGCCGCCGAGCCGGCCGCGGTGCTCTGCTGCGCCGACGAGGCCGCG 160
                       ************************************************************

consensus_12641#0      CTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGC 300
consensus_12641#1      CTCTGCTCCGCCTGCGACCGCCGCGTCCACCGCGCCAACCGCCTCGCCAGCAAGCACCGC 220
                       ************************************************************

consensus_12641#0      CGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCG 360
consensus_12641#1      CGCCTCCCGCTCGTCCACCCGTCCTCCTCCTCCTCCGGCGACGGTGGCGCCGCCGCCGCG 280
                       ************************************************************

consensus_12641#0      CCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCC 420
consensus_12641#1      CCGCTGTGCGACGTGTGCAGGGAGAAGAGGGGCCTCGTGTTCTGCGTCGAGGACCGCGCC 340
                       ************************************************************

consensus_12641#0      ATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCAC 480
consensus_12641#1      ATCCTGTGCGCCGACTGCGACGAGCCCATCCACTCCGCCAACGACCTCACCGCCAAGCAC 400
                       ************************************************************

consensus_12641#0      ACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTC 540
consensus_12641#1      ACCCGCTTCCTCCTCGTCGGCGCCAAGCTCTCCCCCGCCGCGCTCGCCGAACAGCCGCTC 460
                       ************************************************************

consensus_12641#0      CCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTAC 600
consensus_12641#1      CCGTCCTCCGACTGCAGCTCCGACGACGACGCCGCCGCCGCCGCCACCGAGGAGGAGTAC 520
                       ************************************************************

consensus_12641#0      CACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAAC 660
consensus_12641#1      CACTCCTCCGCCGCATCCACCGGCGCCGCAGTGAGCGCGCCTCTTGACGCCTCCAGCAAC 580
                       ************************************************************

consensus_12641#0      GGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATC 720
consensus_12641#1      GGCGCCGGTGGCGGAGGAGGAGTAGGAGGGAGCAGCATCTCCGACTACCTCACCACCATC 640
                       ************************************************************

consensus_12641#0      TGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCC 780
consensus_12641#1      TGCCCCGGCTGGCGCGTCGAGGACCTCCTCCCCGACGACGACGCCTTCGCCGCCGCCGCC 700
                       ************************************************************

consensus_12641#0      GCG--------------------------------------------------------- 783
consensus_12641#1      GCGGTGAGTACTACCAACCCATCGCTCCGCCGTGTTCTTGCTACGTCTCCATCGATGAAG 760
                       ***                                                         

consensus_12641#0      ------------------------------CAGGCGGGGAAAGAGAAGGACGAGCGCGTG 813
consensus_12641#1      CCGAGACTAACCTACGATTCCTTGGAGCAGCAGGCGGGGAAAGAGAAAGACGAGCGCGTG 820
                                                     ***************** ************

consensus_12641#0      CCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGC 873
consensus_12641#1      CCGTTCCTCGACGCCGACCTGTTCGACGTGGTCGCCGGCCGGCCGGAGAAGAAGGGCGGC 880
                       ************************************************************

consensus_12641#0      GCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTC 933
consensus_12641#1      GCGTGGGCGCCGCACGTGCCGCACCTGCCGGCGTGGTGCCTCGACGAGGTGCCGGTCGTC 940
                       ************************************************************

consensus_12641#0      GTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGG 993
consensus_12641#1      GTCGCCGCGTCGGCGGCGCCAGCGGCGACACCTGTAAAGGCGAAGCAGGGACACGTGCGG 1000
                       ************************************************************

consensus_12641#0      GACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCG 1053
consensus_12641#1      GACAGCCACTGGAGCGACAGCGACGCGTTCGCCGTGCCGGAGTTCTCGCCGCCGCCGCCG 1060
                       ************************************************************

consensus_12641#0      CCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCG 1113
consensus_12641#1      CCGGCCAAGAGGGCGCGGCCCAGCTCGCAGTTCTGGTGCTTCTGAACGCCGCCGCCGCCG 1120
                       ************************************************************

consensus_12641#0      TACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGT 1173
consensus_12641#1      TACAATCTGGCCGCCGGCGAGCTCGACGAACACCTCGATGGATCGATCGAACACCTGTGT 1180
                       ************************************************************

consensus_12641#0      AATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTAC 1233
consensus_12641#1      AATCACTCAGCTGGTCACTACTACAAGTAGCAATCAGCAAGCTTGATGTGCCACTGTTAC 1240
                       ************************************************************

consensus_12641#0      TAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACT 1293
consensus_12641#1      TAGCTGCTGCTGTTTAATTAGTGAGTACTAAGCTACTACTAGTTAATTTTGGTGAAAACT 1300
                       ************************************************************

consensus_12641#0      ATGCTACTTTGTTACTATATAATGAAGTATGTGTATCAAACTAAACTGAGATGTTGGTAA 1353
consensus_12641#1      ATGCTACTTGGTTACTATATAATGAAGTATGTGTATCAAACTAAAAAAAAGG-------- 1352
                       ********* ***********************************   *           

consensus_12641#0      TTAATTATCGNNTTTTGTAAAANTNAAA 1381
consensus_12641#1      ----------------------------
                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)