These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1187 fasta sequence [GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG-GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT-GATGC-GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC-GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC-GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG] [+] EMBL AK068836 [GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCAC AGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCAT ] [+] EMBL AK067205 [GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA ] [+] EMBL CB652267 [ CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCACCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAATTCCCAACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCACCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTCTGCAGTTTTTGT ] [+] EMBL CB640202 [ AGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACTATCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGATGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACTGGCGCC TACCTGTTCATGGTGCTCGCCCCAGA ] [+] EMBL BI811415 [ TGGACCACAAACCAAGCGTGCCCGAGGA GCGGCGAGGATCAAGCGGACCGGGG GGA GGT TTCGGGCTGAAGGACGAGCCAGGGGTAGATGC GGGTGT GCTGCCCGGGGAGAACTCGCCGGGGCTCAGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCAGACCTGTTCATGGTGCTCGCCACGGACGGGGTGT GGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAA GCGGTGGTGGA GCC CCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCGCC ] [+] EMBL BI810104 [ TCAAGCGGAGCGGGGTGGAGGTTGTTCGGGCTGAAGGACGAGCCAGGGGTAGATGCAGGGTGT GCTGCCCGGGGAGAACTCGCCGGGGCTC CCCATGGCGAGGTC CTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGA GCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCAC GCCGCCGCCGCCGCCGC ] [-] EMBL CB655345 [ GCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTC TTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAAGTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG] [-] EMBL CB684724 [ TGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTTTGCTTTTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGGGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTAGAGCTTTGGAATGACATTGTAAAT ] consensusID : consensus_12643#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1183 fasta sequence [GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTCGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCGACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA] [+] EMBL AK072080 [GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTCGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCGACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA] consensusID : consensus_12643#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [AGGCCGTGCTCCCACCATGTCGGACACCGGCTACCTCCAGCGGTGCAGCTGACGGTGGACCAACAAACCAAGCGTGCCCGAGGAGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGCTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAGGGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGATCCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGCTCAGCCACGGACGGGGTGTGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGCGTGTGGAGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCAGCCGTCTGCCTCTTCCTCCACAGACCACACCCTCGGCACGCCCCCGCCGCCCCACACCCCCGCCGCTTA] [+] EMBL BI810991 [AGGCCGTGCTCCCACCATGTCGGACACCGGCTACCTCCAGCGGTGCAGCTGACGGTGGACCAACAAACCAAGCGTGCCCGAGGAGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGCTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAGGGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGATCCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGCTCAGCCACGGACGGGGTGTGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGCGTGTGGAGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCAGCCGTCTGCCTCTTCCTCCACAGACCACACCCTCGGCACGCCCCCGCCGCCCCACACCCCCGCCGCTTA] consensusID : consensus_12643#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 145 fasta sequence [AGCAGCACGCGTCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGTGCGGCACAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCACCGCCGCCGCA] [+] EMBL BI810507 [AGCAGCACGCGTCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGTGCGGCACAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCACCGCCGCCGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12643#1 GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCG 60 consensus_12643#3 -------------------------------------------------AGCAGCACGCG 11 consensus_12643#0 ------------------------------------------------------------ consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 TC-GAAGGCG-GTGGTGGAGGC-CGCC-GTGCAGCGGTGGCGGGCCAAGTTCCCGACGTC 116 consensus_12643#3 TCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGT--GCGGCACAAGTTCCCGACGTC 69 consensus_12643#0 ------------------------------------------------------------ consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 CAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGC 176 consensus_12643#3 CAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGC 129 consensus_12643#0 ------------------------------------------------------------ consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 CGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGC 236 consensus_12643#3 CGCCACCGCCGCCGCA-------------------------------------------- 145 consensus_12643#0 ------------------------GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGC 36 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGAC 296 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGAC 96 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 GGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAG 356 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 GGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAG 156 consensus_12643#2 -----------------------------------------------------------A 1 consensus_12643#1 GGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGA 416 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 GGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGA 216 consensus_12643#2 GGCCGTGCTC-CCACCATGTCGGACACCGGCTACCTCCAG-CGGTGCAGCTGACGGTGGA 59 consensus_12643#1 CCA-CAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 475 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 CCA-CAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 275 consensus_12643#2 CCAACAAACCAAGCGTGCCCGAGGAG-CGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 118 consensus_12643#1 TCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCC-G 534 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 TCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCC-G 334 consensus_12643#2 TCGG-CTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAG 177 consensus_12643#1 GGGCTCGC-CATGGCGAGGTC-GCTGGGCGACATGAGGCTGAAGC-GGCACGGC-GTGAT 590 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 GGGCTCGC-CATGGCGAGGTC-GCTGGGCGACATGAGGCTGAAGC-GGCACGGC-GTGAT 390 consensus_12643#2 GGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGAT 237 consensus_12643#1 CCCGGCGC-CGGAGGTGACGTCGCGGCGC-GTGACGGGCGCC--GACCTGTTCATGGTGC 646 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 CCCGGCGC-CGGAGGTGACGTCGCGGCGC-GTGACGGGCGCC--GACCTGTTCATGGTGC 446 consensus_12643#2 CCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGC 297 consensus_12643#1 TC-GCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATC---GTG 702 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 TC-GCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATC-GTGTG 504 consensus_12643#2 TCAGCCACGGACGGGGTGTGG-ACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTG 356 consensus_12643#1 TGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTC 762 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 CGCGACGCCGCGGAAGCAGCACGC-----GTCGAAGGC-GGTGGTGGA-----GGCCGCC 553 consensus_12643#2 CGCGACGCCGCGGAAGCAGCACGC-----GTCGAAGCG-TGTGG---------AGCCGCC 401 consensus_12643#1 GCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGC 822 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 G-TGCAGCGGTGGCG-----GGCCAAGTTCCCGACGTCCAGGGTGGAC--GAC-TGCTCC 604 consensus_12643#2 G-TGCAGCGGTGGCG-----GGCCAAGTTCCCGACGTCCAGGGTGGAC--GAC-TGCTCC 452 consensus_12643#1 AAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATG 882 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 -GCCGTCTGCCTCTTCCTCCAC------GACCACACCCTCGGCACGGCCGCCGCCGC--- 654 consensus_12643#2 AGCCGTCTGCCTCTTCCTCCACA-----GACCACACCCTCGGCACG-CCCCCGCCGC--- 503 consensus_12643#1 TGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAAT 942 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 --CTC-CGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCC 711 consensus_12643#2 --CCCACACCCCCGCCGCTTA--------------------------------------- 522 consensus_12643#1 TAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGC 1002 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 GCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTT 771 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 AATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTT 1062 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 TTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAA 831 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 TTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCT 1122 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 ACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGAC 891 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 GATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGT 1182 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 TCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACA 951 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 A----------------------------------------------------------- 1183 consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 TAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGA 1011 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 ------------------------------------------------------------ consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 AAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATT 1071 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 ------------------------------------------------------------ consensus_12643#3 ------------------------------------------------------------ consensus_12643#0 GTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTT 1131 consensus_12643#2 ------------------------------------------------------------ consensus_12643#1 -------------------------------------------------------- consensus_12643#3 -------------------------------------------------------- consensus_12643#0 GTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG 1187 consensus_12643#2 -------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||