cluster # 1265

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Oryza sativa
cluster # 1265 cluster # 1265 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1265#0 length = 1072 sequences # 2

consensusID : consensus_1265#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1072
fasta sequence

                              [AGGCACAGCACTGCAGTGAAATCGATCACTAGTCGTGGTGGTATCAACTATCAAGTGTGCAAGAAAAAATGGCGGGAGCAGTGGCAACTGTCAGTGTGGGGCTCGCGTGGTTGGGTCTCATGGCCGCAGCGGCGAGCGCGACGCAGTTCAGAGTCGGAGGAGGCAGAGGCTGGAGCGTCCCCGACGCCAACGCCGAGCCGTACAACTCGTGGGCCGGCAGGATGAGGTTCCAGATCGGCGACCAGCTGCTGTTCGTGTACCCGAAGGAGATGGACGCGGTGGTGGTGGTGGATCAGGGGGCGTACGACGCGTGCAACACGTCGTCGTCGGTGGCCGGCGGCGGCGGCGGAAGGTACGACGACGGCAACACGGTGTTCACGTTCGACAGGTCGGGGCCCTTCTTCTTCATCAGCGGCAACGAGGCCAACTGCCGCGCCGGCGAGAAACTCGTCGTCGTCGTCATGGCAGACCGCGGCGGCCGCCACGCGCCTCCGCCGTCGCCGCCGGCTGTGCCTCCTCCCGTCGCGCCGGTGCCGATGCCGA--GCCCGGCGTCGTCGCCACCGTCGCCTGCGCCAGCCGCCGCCACCCCGAGCTTGGCGCCGTCTCCGGTAGCTACGACGCCGAGCCCATCGCCGTCGGTTTCACCTATGGCGCCGGCGCCTGCTCCGACGACGTCAACACCGAGCTCGCCACCGGCGCCAGCGGCCATGGCACCGTCGCCGTCAACTACCCCTGGAGGCGTGGCCCAGCCGCCGCCGCCGCCGGGGACCGATGGGGCGAACGCGACGACGCCGGCGGCGCCCGCAGCCAACGACCGGAGTGGCGCCGCCGCCGCTGCTCCGGTGGTGGCCGGCGTCGTCGTCACGTCGCTGGGAGCATACATCGGCTACGCCATGCTAGCTATCTGAAGCTTTCTGCTTCTGCAGTGACGTGTTCTTTTATTTGTGCAGTGTAAAGTTAAATGAAATCGAGTGGTATATTGTTACAGATACCGTAGAGACTAGAGAGGATTATCTCTGGATTTGTTTTTGCATTGGTGGAATAATGATAGTGAAATAAAAATGTGGTTGAG]

[+] EMBL AK107980             [AGGCACAGCACTGCAGTGAAATCGATCACTAGTCGTGGTGGTATCAACTATCAAGTGTGCAAGAAAAAATGGCGGGAGCAGTGGCAACTGTCAGTGTGGGGCTCGCGTGGTTGGGTCTCATGGCCGCAGCGGCGAGCGCGACGCAGTTCAGAGTCGGAGGAGGCAGAGGCTGGAGCGTCCCCGACGCCAACGCCGAGCCGTACAACTCGTGGGCCGGCAGGATGAGGTTCCAGATCGGCGACCAGCTGCTGTTCGTGTACCCGAAGGAGATGGACGCGGTGGTGGTGGTGGATCAGGGGGCGTACGACGCGTGCAACACGTCGTCGTCGGTGGCCGGCGGCGGCGGCGGAAGGTACGACGACGGCAACACGGTGTTCACGTTCGACAGGTCGGGGCCCTTCTTCTTCATCAGCGGCAACGAGGCCAACTGCCGCGCCGGCGAGAAACTCGTCGTCGTCGTCATGGCAGACCGCGGCGGCCGCCACGCGCCTCCGCCGTCGCCGCCGGCTGTGCCTCCTCCCGTCGCGCCGGTGCCGATGCCGA  GCCCGGCGTCGTCGCCACCGTCGCCTGCGCCAGCCGCCGCCACCCCGAGCTTGGCGCCGTCTCCGGTAGCTACGACGCCGAGCCCATCGCCGTCGGTTTCACCTATGGCGCCGGCGCCTGCTCCGACGACGTCAACACCGAGCTCGCCACCGGCGCCAGCGGCCATGGCACCGTCGCCGTCAACTACCCCTGGAGGCGTGGCCCAGCCGCCGCCGCCGCCGGGGACCGATGGGGCGAACGCGACGACGCCGGCGGCGCCCGCAGCCAACGACCGGAGTGGCGCCGCCGCCGCTGCTCCGGTGGTGGCCGGCGTCGTCGTCACGTCGCTGGGAGCATACATCGGCTACGCCATGCTAGCTATCTGAAGCTTTCTGCTTCTGCAGTGACGTGTTCTTTTATTTGTGCAGTGTAAAGTTAAATGAAATCGAGTGGTATATTGTTACAGATACCGTAGAGACTAGAGAGGATTATCTCTGGATTTGTTTTTGCATTGGTGGAATAATGATAGTGAAATAAAAATGTGGTTGAG]
[+] EMBL CA754193             [                        ATCACTAGTCGTGGTGGTATCAACTATCAAGTGTGCAAGAAAAAATGGCGGGAGCAGTGGCAACTGTCAGTGTGGGGCTCGCGTGGTTGGGTCTCATGGCCGCAGCGGCGAGCGCGACGCAGTTCAGAGTCGGAGGAGGCAGAGGCTGGAGCGTCCCCGACGCCAACGCCGAGCCGTACAACTCGTGGGCCGGCAGGATGAGGTTCCAGATCGGCGACCAGCTGCTGTTCGTGTACCCGAAGGAGATGGACGCGGTGGTGGTGGTGGATCAGGGGGCGTACGACGCGTGCAACACGTCGTCGTCGGTGGCCGGCGGCGGCGGCGGAAGGTACGACGACGGCAACACGGTGTTCACGTTCGACAGGTCGGGGCCCTTCTTCTTCATCAGCGGCAACGAGGCCAACTGCCGCGCCGGCGAGAAGCTCGTCGTCGTCGTCATGGCAGACCGCGGCGGNCGCCACGCGCCTCCGCCGTCGCCGCCGGTTGTGCCTCCTCCCGTCGCGCCGGTGCC ATGCCCAANCCCCGGCGTCNTCNCCCCCGNCCCCTGCGCCCGCCGCCGCCCCCCCGAGCTTGGCGCCGTCTCCGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_1265#0
AGGCACAGCACTGCAGTGAAATCGATCACTAGTCGTGGTGGTATCAACTATCAAGTGTGC
AAGAAAAAATGGCGGGAGCAGTGGCAACTGTCAGTGTGGGGCTCGCGTGGTTGGGTCTCA
TGGCCGCAGCGGCGAGCGCGACGCAGTTCAGAGTCGGAGGAGGCAGAGGCTGGAGCGTCC
CCGACGCCAACGCCGAGCCGTACAACTCGTGGGCCGGCAGGATGAGGTTCCAGATCGGCG
ACCAGCTGCTGTTCGTGTACCCGAAGGAGATGGACGCGGTGGTGGTGGTGGATCAGGGGG
CGTACGACGCGTGCAACACGTCGTCGTCGGTGGCCGGCGGCGGCGGCGGAAGGTACGACG
ACGGCAACACGGTGTTCACGTTCGACAGGTCGGGGCCCTTCTTCTTCATCAGCGGCAACG
AGGCCAACTGCCGCGCCGGCGAGAAACTCGTCGTCGTCGTCATGGCAGACCGCGGCGGCC
GCCACGCGCCTCCGCCGTCGCCGCCGGCTGTGCCTCCTCCCGTCGCGCCGGTGCCGATGC
CGAGCCCGGCGTCGTCGCCACCGTCGCCTGCGCCAGCCGCCGCCACCCCGAGCTTGGCGC
CGTCTCCGGTAGCTACGACGCCGAGCCCATCGCCGTCGGTTTCACCTATGGCGCCGGCGC
CTGCTCCGACGACGTCAACACCGAGCTCGCCACCGGCGCCAGCGGCCATGGCACCGTCGC
CGTCAACTACCCCTGGAGGCGTGGCCCAGCCGCCGCCGCCGCCGGGGACCGATGGGGCGA
ACGCGACGACGCCGGCGGCGCCCGCAGCCAACGACCGGAGTGGCGCCGCCGCCGCTGCTC
CGGTGGTGGCCGGCGTCGTCGTCACGTCGCTGGGAGCATACATCGGCTACGCCATGCTAG
CTATCTGAAGCTTTCTGCTTCTGCAGTGACGTGTTCTTTTATTTGTGCAGTGTAAAGTTA
AATGAAATCGAGTGGTATATTGTTACAGATACCGTAGAGACTAGAGAGGATTATCTCTGG
ATTTGTTTTTGCATTGGTGGAATAATGATAGTGAAATAAAAATGTGGTTGAG

clustalw multiple alignements is not computed in this case