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Oryza sativa
cluster # 1269 cluster # 1269       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1269#0 length = 1222 sequences # 2  

consensusID : consensus_1269#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1222
fasta sequence
                              [TAGCTTGCATCAGAGTTTCATCTCATCTATCGATCGGCTAATTTCTAGCTTAATTAGCTTGTGATCCCTTTCCTTCCCGCCATGGAGGCCTCGTCGTCTCCTTGCAAGCTTCTTCTTCTTCTTCTTCTTCACGTCGTCCTGCTCGCGTTCGCGCCGCTGCTCCAAGCACGGCCACTCGGTCATCAGGTGGTGGTGGCGCCGCTAATGTTGCCGAGCGACGGCGGCGAGGTCGTCGGAGGTGTCGGGCGGCCGGAGGATCACATCCCACCGTCACCTTTTGCGCCTGGCGGGCCGATCACGCTCGCCGGCGGATGGCTGGTGGGGAGGCCGGTCGGCCCCACTCCGCCGCCTCCTTCGCACCCCGTTGTGCCGACTCCGACGCAGCTCGCCGCCGACGATGACGGCGGATTGCTGAGGAGGCCGGGCGGCCCCACTCCGCCGTCTCCTTGGCACCCCGGTGTGCCGACGCAGACGCAGCTCGCCGGCGGCGACGACGGCGGCGTCGGCGGATTGCTTGGGAGGCCGTGGCCTAAGGCTCCCCCGCCGCCTGACCCGAACACGCCGCCGGTGCAGCCGCTCTCCAACTACGGCGTGTCGCGGTGTTGCGGCCGGCCAGGACCCGCTCCGCCGACGCCGGCCGGAAACCCGCCGGGTGAAACCAACGTCGCCGTCGCGCTCGCGCCGCCGATCCCCTGCGCCGCTTTTCTCCGGGTGATCCGCGACGCCGTGCAGTACATGGTCGGCGGCGGACTCGGAGCCTGAAACGATCGAGAGCTCGACACCGAGAAGAAGAGATATATACGAGAGAGTTGTACTTGTACGTGTATATTTGTACGCATACAGAAGCAAAGCTATAGGCAAGTATGTATACGGTATAACGACTGTATAATCGTATATATTGTATAGTCGTTTTTTATTTAATTATAAGTGTCGTAGCAGAGTCTAGGTAAGTAGACACCAGCTGAGCAAAAAGACTAGCTGGCTAGTAGCTGCACGTTGTTGCGTCGCTCAACTACGAAAAATGGAGATGCAGTAATTATAATCTCTCTGTGGCCAATTGGCGCAGTATATGCATATATATATACACGGTGGTGAATCCGGCTGGAATCAGAGGATAGATTTAAAGTCTAAATCTTTTTTGTTAAAAAAAAGATNAAAATACATCCTCTGTATCACCCACCATATTTGGTTTGGCAAAAAAAAAAAAAAAAAAANAAACTCG]

[+] EMBL AK108536             [TAGCTTGCATCAGAGTTTCATCTCATCTATCGATCGGCTAATTTCTAGCTTAATTAGCTTGTGATCCCTTTCCTTCCCGCCATGGAGGCCTCGTCGTCTCCTTGCAAGCTTCTTCTTCTTCTTCTTCTTCACGTCGTCCTGCTCGCGTTCGCGCCGCTGCTCCAAGCACGGCCACTCGGTCATCAGGTGGTGGTGGCGCCGCTAATGTTGCCGAGCGACGGCGGCGAGGTCGTCGGAGGTGTCGGGCGGCCGGAGGATCACATCCCACCGTCACCTTTTGCGCCTGGCGGGCCGATCACGCTCGCCGGCGGATGGCTGGTGGGGAGGCCGGTCGGCCCCACTCCGCCGCCTCCTTCGCACCCCGTTGTGCCGACTCCGACGCAGCTCGCCGCCGACGATGACGGCGGATTGCTGAGGAGGCCGGGCGGCCCCACTCCGCCGTCTCCTTGGCACCCCGGTGTGCCGACGCAGACGCAGCTCGCCGGCGGCGACGACGGCGGCGTCGGCGGATTGCTTGGGAGGCCGTGGCCTAAGGCTCCCCCGCCGCCTGACCCGAACACGCCGCCGGTGCAGCCGCTCTCCAACTACGGCGTGTCGCGGTGTTGCGGCCGGCCAGGACCCGCTCCGCCGACGCCGGCCGGAAACCCGCCGGGTGAAACCAACGTCGCCGTCGCGCTCGCGCCGCCGATCCCCTGCGCCGCTTTTCTCCGGGTGATCCGCGACGCCGTGCAGTACATGGTCGGCGGCGGACTCGGAGCCTGAAACGATCGAGAGCTCGACACCGAGAAGAAGAGATATATACGAGAGAGTTGTACTTGTACGTGTATATTTGTACGCATACAGAAGCAAAGCTATAGGCAAGTATGTATACGGTATAACGACTGTATAATCGTATATATTGTATAGTCGTTTTTTATTTAATTATAAGTGTCGTAGCAGAGTCTAGGTAAGTAGACACCAGCTGAGCAAAAAGACTAGCTGGCTAGTAGCTGCACGTTGTTGCGTCGCTCAACTACGAAAAATGGAGATGCAGTAATTATAATCTCTCTGTGGCCAATTGGCG                                                                                                                                                               ]
[+] EMBL CA754184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGGACCCGCTCCGCCGACGCCGGCCGGAAACCCGCCGGGTGAAACCAACGTCGCCGTCGCGCTCGCGCCGCCGATCCCCTGCGCCGCTTTTCTCCGGGTGATCCGCGACGCCGTGCAGTACATGGTCGGCGGCGGACTCGGAGCCTGAAACGATCGAGAGCTCGACACCGAGAAGAAGAGATATATACGAGAGAGTTGTACTTGTACGTGTATATTTGTACGCATACAGAAGCAAAGCTATAGGCAAGTATGTATACGGTATAACGACTGTATAATCGTATATATTGTATAGTCGTTTTTTATTTAATTATAAGTGTCGTAGCAGAGTCTAGGTAAGTAGACACCAGCTGAGCAAAAAGACTAGCTGGCTAGTAGCTGCACGTTGTTGCGTCGCTCAACTACGAANAATGGAGATGCAGTAATTATAATCTCTCTGTGGCCAATTGGCGCAGTATATGCATATATATATACACGGTGGTGAATCCGGCTGGAATCAGAGGATAGATTTAAAGTCTAAATCTTTTTTGTTAAAAAAAAGATNAAAATACATCCTCTGTATCACCCACCATATTTGGTTTGGCAAAAAAAAAAAAAAAAAAANAAACTCG]


>consensus_1269#0 TAGCTTGCATCAGAGTTTCATCTCATCTATCGATCGGCTAATTTCTAGCTTAATTAGCTT GTGATCCCTTTCCTTCCCGCCATGGAGGCCTCGTCGTCTCCTTGCAAGCTTCTTCTTCTT CTTCTTCTTCACGTCGTCCTGCTCGCGTTCGCGCCGCTGCTCCAAGCACGGCCACTCGGT CATCAGGTGGTGGTGGCGCCGCTAATGTTGCCGAGCGACGGCGGCGAGGTCGTCGGAGGT GTCGGGCGGCCGGAGGATCACATCCCACCGTCACCTTTTGCGCCTGGCGGGCCGATCACG CTCGCCGGCGGATGGCTGGTGGGGAGGCCGGTCGGCCCCACTCCGCCGCCTCCTTCGCAC CCCGTTGTGCCGACTCCGACGCAGCTCGCCGCCGACGATGACGGCGGATTGCTGAGGAGG CCGGGCGGCCCCACTCCGCCGTCTCCTTGGCACCCCGGTGTGCCGACGCAGACGCAGCTC GCCGGCGGCGACGACGGCGGCGTCGGCGGATTGCTTGGGAGGCCGTGGCCTAAGGCTCCC CCGCCGCCTGACCCGAACACGCCGCCGGTGCAGCCGCTCTCCAACTACGGCGTGTCGCGG TGTTGCGGCCGGCCAGGACCCGCTCCGCCGACGCCGGCCGGAAACCCGCCGGGTGAAACC AACGTCGCCGTCGCGCTCGCGCCGCCGATCCCCTGCGCCGCTTTTCTCCGGGTGATCCGC GACGCCGTGCAGTACATGGTCGGCGGCGGACTCGGAGCCTGAAACGATCGAGAGCTCGAC ACCGAGAAGAAGAGATATATACGAGAGAGTTGTACTTGTACGTGTATATTTGTACGCATA CAGAAGCAAAGCTATAGGCAAGTATGTATACGGTATAACGACTGTATAATCGTATATATT GTATAGTCGTTTTTTATTTAATTATAAGTGTCGTAGCAGAGTCTAGGTAAGTAGACACCA GCTGAGCAAAAAGACTAGCTGGCTAGTAGCTGCACGTTGTTGCGTCGCTCAACTACGAAA AATGGAGATGCAGTAATTATAATCTCTCTGTGGCCAATTGGCGCAGTATATGCATATATA TATACACGGTGGTGAATCCGGCTGGAATCAGAGGATAGATTTAAAGTCTAAATCTTTTTT GTTAAAAAAAAGATNAAAATACATCCTCTGTATCACCCACCATATTTGGTTTGGCAAAAA AAAAAAAAAAAAAANAAACTCG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)