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Oryza sativa
cluster # 12702 cluster # 12702       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12702#0 length = 1150 sequences # 8  
consensus_12702#1 length = 756 sequences # 1  
consensus_12702#2 length = 727 sequences # 1  
consensus_12702#3 length = 427 sequences # 1  

consensusID : consensus_12702#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1150
fasta sequence
                              [TTTTTTTACCATAGGGGTTTGATAAAACATGAATATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGTGGAGCATACATTGGTACAAGAGTACAAACTCCACTCAGACCAGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACG-CCTCTCACAAGCTAAAAGCCTAAGCCGGTTTATTCCTCGTCCAATGCATCGGAAGAGCCATCCTTGAGATGGA-GGTGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTTTGTGGCTTTCACATCCTCCGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACGCATCTGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGCTTCAGCTTCCTTTTCAGCTTGACGCAAAGCAT-CAGCAGCTTCTTCCTCAAGTGATCTTACATTAGCAGGGTCAACCTCCTCTTTATTTCCCCAGCCCTCAAAGCTTACATAATAGCCGTTTTCTGTCAGTTCTTCAATTGTTGCATTGTACCACTCCCCATCTTCACTCCACACAGCTTGCACTTTAGTCCCAACTGCAAACTTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCT]

[-] EMBL AU100994             [TTTTTTTACCATAGGGGACAGATAAAACATGAATATCTCTATGTTATGTANTGTTATGTTGTTTCTAGTTTGGACAAGTGGAGCATACANTGGTACAAGNGNACAAACTCCACTCANACCAGGTCCGGAAATAAGCGCCGGACATNGCGGTGTTTGTGATACG CCTCTCACAAGCTAAAAGCCTAAGCCGGTTTATTCCTCGTCCAATGCATCGGAAGAGCCATCCTTGAGATGGA GGNGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGNCCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGNCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCNTTTGACTTGAATGCA GGATCTTCTTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF290886             [                 TTTTTTAAAACATGAATATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF290885             [                tTTTTTTAAAACATGAATATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB629152             [                    GATAAAA ATGCATATAAGTATGTTATGTAATGTTATGCTGTTTCTAGTTTGGACAAGTGGAGCATACATTGGTACAAGAGTACCAACTCCACTCAGACCAGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACGACCTCTCACAAGCTAAAAGCCTAAGCCGGTTTATTCCTCGTCCAATGCCTCGGAAGAGCCATCCTTGAGATGGA GGTGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTTTGTGGCTTTCACATCCTCCGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACGCATCTGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGCTTCAGCTTCCTTTTCAGCTTGACGCAAAGCATCCAGCAGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB664116             [                          ACATGAATATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGTGGAGCATACATTGGTACAAGAGTACAAACTCCACTCAGACCAGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACG CCTCTCACAAGCTAAAAGCATAAGCCGGTTTATTCCTCGTCCAATGCATCGGAAGAGCCATCCTTGAGATGGATGGTGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB619845             [                                 TATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGTGGAGCATACATTGGTACAAGAGTACAAACTCCACTCAGACCAGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACG CCTCTCACAAGCTAAAAGCCTAAGCCGGTTTATTCCTCATCCAATGCATCGGAAGAGCCATCCTTGAGATGGA GGTGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTTTGTGGCTTTCACATCCTCCGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACGCATCTGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGCTTCAGCTTCCTTTTCAGCTTGACGCAAAGCAT CAGCAGCTTCTTCCTCAAGTGATCTTACATTAGCAGGGTCAACCTCCTCTTTATTTCCCCAGCCCTCAAAGCTTACATAATAGCCGTTTTCTGTCAGTTCTTCAATTGTTGCATTGTACCACTCCCCATCTTCACTCCACACAGCTTGCACTTTAGTCCCAACTGCAAACTTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCT                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CA752760             [                                                                                                                 TCAGACCAGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACG CCTCTCACAAGCTAAAAGCCTAAGCCGGTTTATTCCTCGTCCAATGCATCGGAAGAGCCATCCTTGAGATGGA GGTGCTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTTTGTGGCTTTCACATCCTCTGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACGCATCTGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGCTTCAGCTTCCTTTTCAGCTTGACGCAAAGCAT CAGCAGCTTCTTCCTCAAGTGATCTTACATTAGCAGGGTCAACCTCCTCTTTGTTTCCCCAGCCCTCAAAGCTTACATAATAGCCGTTTTCTGTCAGTTCTTCAATTGT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL AU100993             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTCACTCCACACAGCTTGCACTTTAGTCCCAACTGCAAACTTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCT]


>consensus_12702#0 TTTTTTTACCATAGGGGTTTGATAAAACATGAATATCTCTATGTTATGTAATGTTATGTT GTTTCTAGTTTGGACAAGTGGAGCATACATTGGTACAAGAGTACAAACTCCACTCAGACC AGGTCCGGAAATAAGCGCCGGACATGGCGGTGTTTGTGATACGCCTCTCACAAGCTAAAA GCCTAAGCCGGTTTATTCCTCGTCCAATGCATCGGAAGAGCCATCCTTGAGATGGAGGTG CTTCTCCCTTCTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACC TCTGTGATCATCCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAAC CTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTG TGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTT TGTGGCTTTCACATCCTCCGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACG CATCTGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGC TTCAGCTTCCTTTTCAGCTTGACGCAAAGCATCAGCAGCTTCTTCCTCAAGTGATCTTAC ATTAGCAGGGTCAACCTCCTCTTTATTTCCCCAGCCCTCAAAGCTTACATAATAGCCGTT TTCTGTCAGTTCTTCAATTGTTGCATTGTACCACTCCCCATCTTCACTCCACACAGCTTG CACTTTAGTCCCAACTGCAAACTTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGA CTGCAGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACT TTGATTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTCTTGAAGTTCCTTTTC CATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAAC CTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATC CTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGA TTTGATTCCT



consensusID : consensus_12702#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 756
fasta sequence
                              [TCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCAGCATCAACACCCAAAATCGGAAGGAGGTACTCTACCATGAGACACAGACCTGCAATCAATCAAGATAAAGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTCATTACTATTAACATGGTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTCACCTTTCAAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTACCTTGTTGGGCATGGCTCCTTGTAAGAAAGAAGAAAAAGGGATCGATAGCAATAGAATGAAGAGCAAATATCCTTTTGTAGAAAATCATCAAGTCATATTAGCATTAGTGTACAAGATATGGCATCTGACAATTAGTTGATACCTAGCAACACAAAGTACACAGCAGCATAACATACAACATGCAGGATACTCACCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTAAAATCACGCGACTGCGCGTACTCCCTCTGCCGCAGAGCACAATCTCCACATCACGCTCGTGAAACTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTTCAAGGTTCAGACT]

[-] EMBL CB619844             [TCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCAGCATCAACACCCAAAATCGGAAGGAGGTACTCTACCATGAGACACAGACCTGCAATCAATCAAGATAAAGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTCATTACTATTAACATGGTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTCACCTTTCAAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTACCTTGTTGGGCATGGCTCCTTGTAAGAAAGAAGAAAAAGGGATCGATAGCAATAGAATGAAGAGCAAATATCCTTTTGTAGAAAATCATCAAGTCATATTAGCATTAGTGTACAAGATATGGCATCTGACAATTAGTTGATACCTAGCAACACAAAGTACACAGCAGCATAACATACAACATGCAGGATACTCACCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTAAAATCACGCGACTGCGCGTACTCCCTCTGCCGCAGAGCACAATCTCCACATCACGCTCGTGAAACTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTTCAAGGTTCAGACT]


>consensus_12702#1 TCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCAGCATCAACACCCAAAATCGGAAGG AGGTACTCTACCATGAGACACAGACCTGCAATCAATCAAGATAAAGGGTAATGGACAACT TTGAAGCCATGGAATTTTAGATTTAGTGGTCATTACTATTAACATGGTTGCTCAGATATT CCCTACCATTGACATATTCAACCTTTCTCACCTTTCAAGGTTACAATAAAACCTAAATGC CCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTACCTTGTTGGGCATGGCTCCTTGTAA GAAAGAAGAAAAAGGGATCGATAGCAATAGAATGAAGAGCAAATATCCTTTTGTAGAAAA TCATCAAGTCATATTAGCATTAGTGTACAAGATATGGCATCTGACAATTAGTTGATACCT AGCAACACAAAGTACACAGCAGCATAACATACAACATGCAGGATACTCACCTCTTGAAGT TCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATC TTCCTAACCTAAAATCACGCGACTGCGCGTACTCCCTCTGCCGCAGAGCACAATCTCCAC ATCACGCTCGTGAAACTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTC CTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCG CCGCCGCCGCCTCGATTTGATTTCAAGGTTCAGACT



consensusID : consensus_12702#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 727
fasta sequence
                              [TTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTGCAGTTATTACAGAAAATCACATTAAGTACAACACAAGAACCAACCTCCCAATATCATTAAATCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCAGCATCAACACCCAAAATCGGAAGGAGGTACTCTACCATGAGACACAGACCTGCAATCAATCAAGATAAAGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTCATTACTATTAACATGGTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTCACCTTTCAGAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTACCTTGTTGGGCATGGCTCCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCGTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCTCAATTCAGACTCCTCAGGTTT]

[-] EMBL CB678152             [TTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTGCAGTTATTACAGAAAATCACATTAAGTACAACACAAGAACCAACCTCCCAATATCATTAAATCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCAGCATCAACACCCAAAATCGGAAGGAGGTACTCTACCATGAGACACAGACCTGCAATCAATCAAGATAAAGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTCATTACTATTAACATGGTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTCACCTTTCAGAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTACCTTGTTGGGCATGGCTCCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCGCGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCGCCGATGCCGTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCTCAATTCAGACTCCTCAGGTTT]


>consensus_12702#2 TTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTT GGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGC TCTTCTGTTAATGTAATAACCTGCAGTTATTACAGAAAATCACATTAAGTACAACACAAG AACCAACCTCCCAATATCATTAAATCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCA GCATCAACACCCAAAATCGGAAGGAGGTACTCTACCATGAGACACAGACCTGCAATCAAT CAAGATAAAGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTCATTAC TATTAACATGGTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTCACCTTTC AGAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTTCATGCTA CCTTGTTGGGCATGGCTCCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAATTCC AGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCGCGGAGCTGCTCCTTGTAGGT GGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCCTCGCCTCGCCG CCGATGCCGTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCTCAATTCAGACTCCT CAGGTTT



consensusID : consensus_12702#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 427
fasta sequence
                              [GCAAAAAACATTTGGGTAACCAAGGAGGAAACAAAAATTCCAAAATTCAGGACCCAGGGTTCCGGGGAAAATAAGGCGCCGGAAACATGGCGGGTGTTTGGGATAAACGCCTTTTCACAAGGTTAAAAAGCATAAGCCGGTTTATTTCTTTCGTTCCAATGCATTCGGGAAGAGCCATCCTTGAGATGGAGGTGCTTGATCCCTATTTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCATTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTT]

[-] EMBL AA754184             [GCAAAAAACATTTGGGTAACCAAGGAGGAAACAAAAATTCCAAAATTCAGGACCCAGGGTTCCGGGGAAAATAAGGCGCCGGAAACATGGCGGGTGTTTGGGATAAACGCCTTTTCACAAGGTTAAAAAGCATAAGCCGGTTTATTTCTTTCGTTCCAATGCATTCGGGAAGAGCCATCCTTGAGATGGAGGTGCTTGATCCCTATTTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCATTTTTGCGACCGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCATTCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTT]


>consensus_12702#3 GCAAAAAACATTTGGGTAACCAAGGAGGAAACAAAAATTCCAAAATTCAGGACCCAGGGT TCCGGGGAAAATAAGGCGCCGGAAACATGGCGGGTGTTTGGGATAAACGCCTTTTCACAA GGTTAAAAAGCATAAGCCGGTTTATTTCTTTCGTTCCAATGCATTCGGGAAGAGCCATCC TTGAGATGGAGGTGCTTGATCCCTATTTCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAG TGACACCGACCTTACCTCTGTGATCATCCGGTGACTTGAAGATGCTCTCATTTTTGCGAC CGGAAAAGAACCCAACCTTTTTGGCTTTCCCTTTGGTCGTTTGGAACTGCTGCCATGCAT TCTGCCTCTTATTTTGTGCAAATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCAT GGATCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12702#0      -----------------------------TTTTTTTACCATAGGGGTTTGATAAAACATG 31
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      TTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGCAGTCCGCTTGAATAATTT 60
                                                                                   

consensus_12702#0      AATATCTCTATGTTATGTAATGTTATGTTGTTTCTAGTTTGGACAAGT--GGAGCATACA 89
consensus_12702#3      --------------------------GCAAAAAACA-TTTGGGTAACCAAGGAGGAAACA 33
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      GGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGATTTGCAGTTGCCAAAAGC 120
                                                                                   

consensus_12702#0      TTGGTACAAGAGTACAAACTC--CACTCAGACCAGGTCCGGAAATAAG-CGCCGGA--CA 144
consensus_12702#3      AAAATTCCAAAATTCAGGACC--CAG--GGTTCCGG--GGAAAATAAGGCGCCGGAAACA 87
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      TCTTCTGTTAATGTAATAACCTGCAGTTATTACAGAAAATCACATTAAGTACAACACAAG 180
                                                                                   

consensus_12702#0      TGGCGG-TGTTTGTGATA--CGCCTCT-CACAAGCT--AAAAGCCTAAGCCGGTTTATTC 198
consensus_12702#3      TGGCGGGTGTTTGGGATAAACGCCTTTTCACAAGGTTAAAAAGCATAAGCCGGTTTATTT 147
consensus_12702#1      ------------------------TCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCA 36
consensus_12702#2      AACCAACCTCCCAATATCATTAAATCTGTCCATATTTAGCGATTCAAACTTAGAGAAGCA 240
                                               * *   **   *     *    **    *   *   

consensus_12702#0      CTCG---TCCAATGCATC--GGAAGAGCCATCCTTGAGATGGAGGTGCTT--CTCCCTTC 251
consensus_12702#3      CTTTCGTTCCAATGCATTCGGGAAGAGCCATCCTTGAGATGGAGGTGCTTGATCCCTATT 207
consensus_12702#1      GCATCAACACCCAAAATC-GGAAGGAGGTACTCT--ACCATGAGACACAGACCTGCAATC 93
consensus_12702#2      GCATCAACACCCAAAATC-GGAAGGAGGTACTCT--ACCATGAGACACAGACCTGCAATC 297
                                *     **   * * ***  *  **  *    ***   *       *  * 

consensus_12702#0      TCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTT--ACCTCTGTGATC 309
consensus_12702#3      TCTGGAACTCGGTAAGGCCTTTCCCGCTCCCAGTGACACCGACCTT--ACCTCTGTGATC 265
consensus_12702#1      AATCAAGATAA--AGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTC 151
consensus_12702#2      AATCAAGATAA--AGGGTAATGGACAACTTTGAAGCCATGGAATTTTAGATTTAGTGGTC 355
                         *  *  *    * **   *   *         * **  **  **     *  *** **

consensus_12702#0      AT--CCGGTGACTTGAAGATGCTCTCCTTTTTGCGACCGGAAAAGAACCCAACCTTTTTG 367
consensus_12702#3      AT--CCGGTGACTTGAAGATGCTCTCATTTTTGCGACCGGAAAAGAACCCAACCTTTTTG 323
consensus_12702#1      ATTACTATTAACATG--GTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTC 209
consensus_12702#2      ATTACTATTAACATG--GTTGCTCAGATATTCCCTACCATTGACATATTCAACCTTTCTC 413
                       **  *   * ** **  * *****   * **  * ***    *   *  ******** * 

consensus_12702#0      GCTTTCCCTTTGGTCGTTTGGAACT--GCTGCCATGCATTC-TGCCTCTTATTTTGTGCA 424
consensus_12702#3      GCTTTCCCTTTGGTCGTTTGGAACT--GCTGCCATGCATTC-TGCCTCTTATTTTGTGCA 380
consensus_12702#1      ACCTTTCA-AGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTT 268
consensus_12702#2      ACCTTTCAGAGGTTACAATAAAACCTAAATGCCCCACAAAAATGTTGCAAGCTGCCTTTT 473
                        * ** *    * *    *  ***     ****   **    **   *    *   *   

consensus_12702#0      AATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTTCTTACGCTTTGTG 484
consensus_12702#3      AATTCTAGCTGCTCAAAGCGGGCTTTTGACTTGAATGCATGGATCTT------------- 427
consensus_12702#1      CATGCTACCTTGTTGGGCATGGCTCCTTGTAAGAAAGAAGAAAAAGGGATCGATAGCAAT 328
consensus_12702#2      CATGCTACCTTGTTGGGCATGGCTCCT--------------------------------- 500
                        ** *** **  *       ****  *                                 

consensus_12702#0      GCTTTCACATCCTCCGGATCATTTGGATCGATACGGAGTTTGGTGGGTAAGCTACGCATC 544
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      AGAATGAAGAGCAAATATCCTTTTGTAGAAAATCATCAAGTCATATTAGCATTAGTGTAC 388
consensus_12702#2      ------------------------------------------------------------
                                                                                   

consensus_12702#0      TGAAAGTCAGATGTTGCTGCCTGTTCAATTTTCCTCTTTATTGCCATTTTGGTAGCTTCA 604
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      AAGATATGGCATCTGACAATTAGTTGATACCTAGCAACACAAAGTACACAGCAGCATAAC 448
consensus_12702#2      ------------------------------------------------------------
                                                                                   

consensus_12702#0      GCTTCCTTTTCAGCTTGACGCAAAGCATCAGCAGCTTCTTCCTCAAGTGATCTTACATTA 664
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      ATACAACATGCAGGATACTCACCTCTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAA 508
consensus_12702#2      ------------------------CTTGAAGTTCCTTTTCCATATCAAGGTATTCAGAAA 536
                                                                                   

consensus_12702#0      GCAGGGTCAACCTCCTCTTTATTTCCCCAGCCCTCAAAGCTTACATAATAGCCGTTTTCT 724
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      TTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTAAAATCACGCGACTGCGC 568
consensus_12702#2      TTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCT------------------ 578
                                                                                   

consensus_12702#0      GTCAGTTCTTCAATTGTTGCATTGTACCACTCCCCATCTTCACTCCACACAGCTTGCACT 784
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      GTACTCCCTCTGCCGCAGAGCACAATCTCCACATCACGCTCGTGAAACTCGCGGAGCTGC 628
consensus_12702#2      -------------------------------------------------CGCGGAGCTGC 589
                                                                                   

consensus_12702#0      TTAGTCCCAACTGCAAACTTCTCATGGGATTGCGAAGGGTCATCCAGTGCCTCTGACTGC 844
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      TCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCC 688
consensus_12702#2      TCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCCATGGCCGCC 649
                                                                                   

consensus_12702#0      AGTCCGCTTGAATAATTTGGCGGTGATAGACCTACATCATTCTGGGTGTTCCCACTTTGA 904
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      TCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTTCAAGG 748
consensus_12702#2      TCGCCTCGCCGCCGATGCCGTCGCCTCCGCCGCCGCCGCCGCCTCGATTTGATTCCTCAA 709
                                                                                   

consensus_12702#0      TTTGCAGTTGCCAAAAGCTCTTCTGTTAATGTAATAACCTCTTGAAGTTCCTTTTCCATA 964
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      TTCAGACT---------------------------------------------------- 756
consensus_12702#2      TTCAGACTCCTCAGGTTT------------------------------------------ 727
                                                                                   

consensus_12702#0      TCAAGGTATTCAGAAATTCCAGGATCATCGTTTTTCTCCTTGATAATCTTCCTAACCTCG 1024
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      ------------------------------------------------------------
                                                                                   

consensus_12702#0      CGGAGCTGCTCCTTGTAGGTGGAGAGATTGGAGGCGAGCTCCTCCACGCTCAGATCCTCC 1084
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      ------------------------------------------------------------
                                                                                   

consensus_12702#0      ATGGCCGCCTCGCCTCGCCGCCGATGCCCTCGCCTCCGCCGCCGCCGCCGCCTCGATTTG 1144
consensus_12702#3      ------------------------------------------------------------
consensus_12702#1      ------------------------------------------------------------
consensus_12702#2      ------------------------------------------------------------
                                                                                   

consensus_12702#0      ATTCCT 1150
consensus_12702#3      ------
consensus_12702#1      ------
consensus_12702#2      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)