These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12705#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3104 fasta sequence [GGTCTCCAAGTCCCAAACAAGAAGAAGGAGCAGC-AGCAGCGAGAGAGAGAGAGAGAGAGATTGATAATTACAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTCGCCGCAGCGCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGACGGACAAGGCGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTATCTAGTTCCTTAATCTTTCATCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCACCTCTAAGTGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGAAAAGCCCGTCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTTAATTTCCAACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAGTCCTTTGATATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTCCTTGTGATTGCCATCAGAGTTGACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAAGGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCTTGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAGTCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAGCCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCATGCTCTGATGACAGTAAGGAGTCTGGCCACCTAAAGAAGAGCCTATCTCTTGGAAACATGCTTCACAAGGATCATGATCATCATTTTAGTGAAGGTGCTGAATGTGATATTATTGACTGTGACCACAAAGGCCATTGCTCTAGTTTGAAAAGCAATTCAGCTGTTGGAGATTCTGCTAAGTTAAACACTAAGGGCAATGAGAATGCTTTTGATGCCTTGTCTGACTTGGTCAGTCCTTCAGGTGACCATGTTGTTGACTCTGATAGCCACTACCTGTGTTATGACCAGACCAAATTTCCAAGATCACAATCTGCTATATTTCAGAATAATTCCAATTGTGGTACAGAAGGTTCTGCTGATTCTGAGATACTAGGGCCTCGTTGCAGGTCTTATGAAGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGTCGAGCCACATCACTCTAAATCAAATTTGGATGTGCATTGTGCTGGACCTTCTTCTCCAGATGTCTATGAAAGAATGAACTTTGAGGACAATGGTTCAATAGGTTGTTCTGATGCTGCTGATGGGGGTCAAAGGTCTACTGCAAGTGCAGAAGAAAGTTTTGTTAGGGATGGGATGCTAAGTCATGAATATTGGGATAACAAATATGTGAGCGGTCACCAATCAGTTGATCCAGTTGCCCCCTACTACTCTGGTACAGGGGATGGTTCTCACCATTCCAACAATGACGGTGGCATCAATGAAGCTCTAGATCAAGAGAGAAAAGATAACTTGTGGAACAGAGATAGCACTCCCTACCACAAATCACTTGTCATTGATGCGAGTGATCTAAAGTTGTGTGATTCAAAGGATATTAGTGAAGAACTCAAGCACAACAGAACTGGAATTAATGACAACCAGTATTTCGATGTGGACCCAGATGAACTTTCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAAATTGATATTGACGATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTGACAAAATATAATGAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCTCTTGGCATGGAGATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCACAATTAGGAAACCTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGCTTGTTGAACTTGTCTGGGAATTCAATTGTGCGAATAACTGCAGGGGCTCTTCCAAGGGGTCTTCACATGTTAAGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTGACACGCTTACGCTTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTGGCGTCCTGTTCTTCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGTCTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACATCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTAC-AACAAGCATCCTATA-AGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTC-TTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCA-CAGAGTTCA-CGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCA-TGGCGGTGGCAGCTTCA-GGGCCTAGA-CTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCT-CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGAC-AA-TGGTGATTGTGTTGAATAATTCATTGCTGACTAATGAGGAAC--AAAC-ATATTTAGAAAAAAACCCTGTACACACTCTGCTAATGTTATTCTTGCTGTACATACAGAGTGAAATTAATTGATTAAT] [+] EMBL AK067091 [GGTCTCCAAGTCCCAAACAAGAAGAAGGAGCAGC AGCAGCGAGAGAGAGAGAGAGAGAGATTGATAATTACAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTCGCCGCAGCGCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGACGGACAAGGCGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTGTCTAGTTCCTTAATCTTTCGTCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCACCTCTAAGTGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGAAAAGCCCGTCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTTAATTTCCAACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAGTCCTTTGATATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTACTTGTGATTGCCATCAGAGTTGACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAAGGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCTTGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAGTCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAGCCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCATGCTCTGATGACAGTAAGGAGTCTGGCCACCTAAAGAAGAGCCTATCTCTTGGAAACATGCTTCACAAGGATCATGATCATCATTTTAGTGAAGGTGCTGAATGTGATATTATTGACTGTGACCACAAAGGCCATTGCTCTAGTTTGAAAAGCAATTCAGCTGTTGGAGATTCTGCTAAGTTAAACACTAAGGGCAATGAGAATGCTTTTGATGCCTTGTCTGACTTGGTCAGTCCTTCAGGTGACCATGTTGTTGACTCTGATAGCCACTACCTGTGTTATGACCAGACCAAATTTCCAAGATCACAATCTGCTATATTTCAGAATAATTCCAATTGTGGTACAGAAGGTTCTGCTGATTCTGAGATACTAGGGCCTCGTTGCAGGTCTTATGAAGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGTCGAGCCACATCACTCTAAATCAAATTTGGATGTGCATTGTGCTGGACCTTCTTCTCCAGATGTCTATGAAAGAATGAACTTTGAGGACAATGGTTCAATAGGTTGTTCTGATGCTGCTGATGGGGGTCAAAGGTCTACTGCAAGTGCAGAAGAAAGTTTTGTTAGGGATGGGATGCTAAGTCATGAATATTGGGATAACAAATATGTGAGCGGTCACCAATCAGTTGATCCAGTTGCCCCCTACTACTCTGGTACAGGGGATGGTTCTCACCATTCCAACAATGACGGTGGCATCAATGAAGCTCTAGATCAAGAGAGAAAAGATAACTTGTGGAACAGAGATAGCACTCCCTACCACAAATCACTTGTCATTGATGCGAGTGATCTAAAGTTGTGTGATTCAAAGGATATTAGTGAAGAACTCAAGCACAACAGAACTGGAATTAATGACAACCAGTATTTCGATGTGGACCCAGATGAACTTTCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAAATTGATATTGACGATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTGACAAAATATAATGAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCTCTTGGCATGGAGATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCACAATTAGGAAACCTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGCTTGTTGAACTTGTCTGGGAATTCAATTGTGCGAATAACTGCAGGGGCTCTTCCAAGGGGTCTTCACATGTTAAGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTGACACGCTTACGCTTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTGGCGTCCTGTTCTTCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGTCTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACATCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTAC AACAAGCATCCTATA AGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTC TTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCA CAGAGTTCA CGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCA TGGCGGTGGCAGCTTCA GGGCCTAGA CTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCT CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGAC AATTGGTGATTGTGTTGAATAATTCATTGCTGACTAATGAGGAACA AAACAATATTTAGATGGGCACCCTGTACACACTCTGCTAATGTTATTCTTGCTGTACATACAGAGTGAAATTAATTGATTAAT] [+] EMBL CB631154 [ gcAGCAGCAGCGAG AGAGAGAGAGAGAGAGAGAGAGATTGATAATTACAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTCGCCGCAGCGCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGACGGACAAGGCGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTATCTAGTTCCTTAATCTTTCATCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCACCTCTAAGTGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGAAAAGCCCGTCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTTAATTTCCAACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAGTCCTTTGATATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTCCTTGTGATTGCCATCAGAGTTGACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAAGGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCTTGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAGTCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAGCCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTTGACAGATATGCATGCTCT ] [+] EMBL CB635329 [ TAATCCCAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTCGCCGCAGCGCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGACGGACAAGGCGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTATCTAGTTCCTTAATCTTTCATCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCACCTCTAAGTGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGAAAAGCCCGTCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTTAATTTCCAACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAGTCCTTTGATATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTCCTTGTGATTGCCATCAGAGTTGACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAAGGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCTTGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAGTCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAGCCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCAT ] [-] EMBL CB631155 [ tCAGTATTTCGATGTGGACCCAGATGAACTTTCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAAATTGATATTGACGATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTGACAAAATATAATGAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCTCTTGGCATGGAGATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCACAATTAGGAAACCTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGCTTGTTGAACTTGTCTGGGAATTCAATTGTGCGAATAACTGCAGGAGCTCTTCCAAGGGGTCTTCACATGTTAAGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTGACACGCTTACGCTTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTGGCGTCCTGTTCTTCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGATGGTCTTCACCGTCTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACATCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTAC AACAAGCATCCTATA AGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTC TTCCCATCGTTCCGATCGCAGCGGTAGATGGGA ] [+] EMBL BQ906078 [ GTAGGTCTCCTGCC AACCTTGGTTTCTAC AACAAGCATCCTATA AGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTC TTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCA CAGAGTTCA CGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCA TGGCGGTGGCAGCTTCA GGGCCTAGA CTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCT CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGAC AA TGGTGATTGTGTTGAATAATTCATTGCTGACTAATGAGGAACCAAAAC ATATTTAGAAAAAA ] [+] EMBL BQ906933 [ AACCTTGGTTTCTACGTACAAGCATCCTATAGAGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTCGTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCA CAGAGTTCA CGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCA TGGCGGTGGCAGCTTCA GGGCCTAGA CTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCC ATGCTCT CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAAC ATATGCTGAaaaaaaa ] [+] EMBL BQ907394 [ AAGCATCCTATA AGAGCATCTGGCTC AAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTC TTCCCATCGTTCCGATCGCA CGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCA CAGAGTTCACCGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCA TGGCGGTGGCAGCTTCA GGGCCTAGA CTGATGGAATAT GCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCT CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAAC ATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGAC AA TGGTGATTGTGTTGAATAATTCATTGCTGACTAATGAGGAAC AAACAATATTTAAAAAAAA ] [+] EMBL BQ906186 [ GACCGGCACACCCGCAAGATTTCTTC TTCCCATCGTTCCGATC CAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACCAGAGTTCA CGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAA GGGCCGAAGCA TGCCGGTGGCAGCTTCA GGGCCTAGA CTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCC ATGCTCT CTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCA CTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGACAAA TGGTGATTGTGTTGAATAATTCATTGCTGACTNATGAGGAAC AAAC ATATTTAGAAAAAA ] [+] EMBL BQ908176 [ GCACTGGCGGTGGCAGCTTCACGGGCCTAGACCTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCTCCTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAAC ATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCTAGATGGTGTTGAGTAGTATTACATTGGAAGACAAA TGGTGATTGTGTTGAATAATTCATTGCTGACTAATGAGGAAC AAAC ATATTTAGAAAAAAAa ] consensusID : consensus_12705#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 661 fasta sequence [CACAACAAGATCTCCACATCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATGGCGGTGGCAGCTTCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATGCCAATGCTCTCTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCATATATATGGTGTTGAGTAGTATTACATTGGAAGACAAATGGTGATTGTGTTGAATAATTCAGGGCTGACTAATGTGGAACAAAACAATATTTGCTATTAAGGA] [-] EMBL CB635330 [CACAACAAGATCTCCACATCGAAGGGGCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAAATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGGCATGCGCGTTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATGGCGGTGGCAGCTTCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAAGGCTCAGTAATGCCAATGCTCTCTCCTGTTTTCTTTTAATTTGTTGGTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGTTTTCCATATATATGGTGTTGAGTAGTATTACATTGGAAGACAAATGGTGATTGTGTTGAATAATTCAGGGCTGACTAATGTGGAACAAAACAATATTTGCTATTAAGGA] [-] EMBL CB639045 [ CTCTTGAAGCCGTAAACCTAGATGGGAACCCAGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAACCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCGGCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12705#0 GGTCTCCAAGTCCCAAACAAGAAGAAGGAGCAGCAGCAGCGAGAGAGAGAGAGAGAGAGA 60 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TTGATAATTACAGATCCAATCACAGGTGAGGTAGGTTCTCCTGACTCTCTTCGCCGCAGC 120 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 GCACACCACCCCAACTAGCTCCTAGCCATTAGAGCCGGATTCTTTTCTGGACGGACAAGG 180 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CGGAGAGGGAAGAAGAAGGATTGTGCCAACCATATGCATCCTTCTGGAATTATCTAGTTC 240 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CTTAATCTTTCATCCAGCCTGGCAGATATCAAGAGGTCAGGCACATCTCGCACCTCTAAG 300 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGGGTGTGGGTTTGCAACTACTCTGCAACCAACTTAACCTCGCCTCTGGGGAAAAGCCCG 360 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TCTTACATCTGGAGACTACGCCGAGCATTGGAGGGTCTTTTCGATTATGGTTAATTTCCA 420 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACAATAGTTGAGATGTAACACGTTTGCTGAACTGAGTTCTCATCGAAGGTAGTCCTTTGA 480 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TATAGCAATGTGATTGGGTCGACTCTGTTTGTGTTGTCCTTGTGATTGCCATCAGAGTTG 540 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACTTATGGTTAGGTTTTTCTGCTTCTCATCCTCGACCAGTACCACACATCATAGGGCAAA 600 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 GGAACACTTTCTGCCAGCTGAACAAGTCATTCTCGGTGCTTCACAGAAGGATACCATGCT 660 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGCTGTTTCACAGATGGATTCTCAGGATCAAACAGTGAAGTCCAACGCTGGATCAGCAAG 720 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TCCAAACCAGTTGACAGATGTAAATGATCATTCAAATGTTAGCCGGCAGTATGATACTAG 780 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CCCATCGTCTCATCAAGAATGCTGGAGATCTGAAGACTTGAACAGATATGCATGCTCTGA 840 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGACAGTAAGGAGTCTGGCCACCTAAAGAAGAGCCTATCTCTTGGAAACATGCTTCACAA 900 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 GGATCATGATCATCATTTTAGTGAAGGTGCTGAATGTGATATTATTGACTGTGACCACAA 960 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 AGGCCATTGCTCTAGTTTGAAAAGCAATTCAGCTGTTGGAGATTCTGCTAAGTTAAACAC 1020 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TAAGGGCAATGAGAATGCTTTTGATGCCTTGTCTGACTTGGTCAGTCCTTCAGGTGACCA 1080 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGTTGTTGACTCTGATAGCCACTACCTGTGTTATGACCAGACCAAATTTCCAAGATCACA 1140 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ATCTGCTATATTTCAGAATAATTCCAATTGTGGTACAGAAGGTTCTGCTGATTCTGAGAT 1200 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACTAGGGCCTCGTTGCAGGTCTTATGAAGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGA 1260 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TTATCTGAATAGCGATCTGTGTTCAGCGGTTAGTGAGAAGGTTGATTATCTGAATAGCGT 1320 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CGAGCCACATCACTCTAAATCAAATTTGGATGTGCATTGTGCTGGACCTTCTTCTCCAGA 1380 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGTCTATGAAAGAATGAACTTTGAGGACAATGGTTCAATAGGTTGTTCTGATGCTGCTGA 1440 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGGGGGTCAAAGGTCTACTGCAAGTGCAGAAGAAAGTTTTGTTAGGGATGGGATGCTAAG 1500 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TCATGAATATTGGGATAACAAATATGTGAGCGGTCACCAATCAGTTGATCCAGTTGCCCC 1560 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CTACTACTCTGGTACAGGGGATGGTTCTCACCATTCCAACAATGACGGTGGCATCAATGA 1620 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 AGCTCTAGATCAAGAGAGAAAAGATAACTTGTGGAACAGAGATAGCACTCCCTACCACAA 1680 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ATCACTTGTCATTGATGCGAGTGATCTAAAGTTGTGTGATTCAAAGGATATTAGTGAAGA 1740 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACTCAAGCACAACAGAACTGGAATTAATGACAACCAGTATTTCGATGTGGACCCAGATGA 1800 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACTTTCCCCAAGAACTTTTAGCATTAAAAGAATTGAGGATTGGATCAACCAAATTGATAT 1860 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TGACGATGGCACCCTTGTCGAGGAGCAAGGAGAAAGTTCAAACTCGGTGTTGACAAAATA 1920 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TAATGAGCCGGTGGCTGGTGTTCCTGCTGTCCGGCCTGATGCTAAAAGTCCTCTTGGCAT 1980 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 GGAGATAGCTTACACTTATATTTCGAAATTGACTCCGACTTCTTCGTCGGCACAATTAGG 2040 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 AAACCTTGGCTTGGTTGCAATTCCAAGATTGAGCGCTTTCTTAGGCCTACGCTTGTTGAA 2100 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CTTGTCTGGGAATTCAATTGTGCGAATAACTGCAGGGGCTCTTCCAAGGGGTCTTCACAT 2160 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 GTTAAGCTTGTCAAAGAATAATATCTCAACAATTGAGGGCCTTAGAGAATTGACACGCTT 2220 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 ACGCTTACTGGACATCAGCTATAATAGGATATCCAGAATTGGCCATGGTTTGGCGTCCTG 2280 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 TTCTTCTTTGAAGGAGTTGTATCTGGGTGGTAACAAGATCAGTGAGGTAGATGGTCTTCA 2340 consensus_12705#1 ------------------------------------------------------------ consensus_12705#0 CCGTCTTCTGAAGCTAAAGGTTCTGGACCTGCGCCACAACAAGATCTCCACATCGAAGGG 2400 consensus_12705#1 ----------------------------------CACAACAAGATCTCCACATCGAAGGG 26 ************************** consensus_12705#0 GCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCC 2460 consensus_12705#1 GCTTGGTCAGCTGGCTGCAAACTATAGTTCTCTTGAAGCCGTAAACCTAGATGGGAACCC 86 ************************************************************ consensus_12705#0 AGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAA 2520 consensus_12705#1 AGCGCAGAAGAATGTAGGTGATGAGCACCTGAAGAAGTACCTTGTAGGTCTCCTGCCAAA 146 ************************************************************ consensus_12705#0 CCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCG 2580 consensus_12705#1 CCTTGGTTTCTACAACAAGCATCCTATAAGAGCATCTGGCTCAAAAGAGGTATCGGACCG 206 ************************************************************ consensus_12705#0 GCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAA 2640 consensus_12705#1 GCACACCCGCAAGATTTCTTCTTCCCATCGTTCCGATCGCAGCGGTAGATCGGATCGTAA 266 ************************************************************ consensus_12705#0 ATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGGCATGCGCG 2700 consensus_12705#1 ATCCTCGAGGTTGGTGGCTAGCACATCCTCTTACAAGGCACAGAGTTCACGGCATGCGCG 326 ************************************************************ consensus_12705#0 TTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATGGCGGTGGC 2760 consensus_12705#1 TTCTGGGCATGCCTCGAGCTCTTTTCTGAAGAATCCAAGGGGCCGAAGCATGGCGGTGGC 386 ************************************************************ consensus_12705#0 AGCTTCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAA 2820 consensus_12705#1 AGCTTCAGGGCCTAGACTGATGGAATATGGCGGTGCCGGGGATGTTCAGATCGAGAGAAA 446 ************************************************************ consensus_12705#0 GGCTCAGTAATAAGTTTTTCAGACTGCCAATGCTCTCTCCTGTTTTCTTTTAATTTGTTG 2880 consensus_12705#1 GGCTCAGTAAT--------------GCCAATGCTCTCTCCTGTTTTCTTTTAATTTGTTG 492 *********** *********************************** consensus_12705#0 GTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGT 2940 consensus_12705#1 GTAAATAAAGCTCAAACAATATGCTGAGTTTCAGCTGCAGCAGCAGTTCGTATGATATGT 552 ************************************************************ consensus_12705#0 TTTCC---TAGATGGTGTTGAGTAGTATTACATTGGAAGACAA-TGGTGATTGTGTTGAA 2996 consensus_12705#1 TTTCCATATATATGGTGTTGAGTAGTATTACATTGGAAGACAAATGGTGATTGTGTTGAA 612 ***** ** ******************************** **************** consensus_12705#0 TAATTCATTGCTGACTAATGAGGAACAAAC--ATATTTAGAAAAAAACCCTGTACACACT 3054 consensus_12705#1 TAATTCAGGGCTGACTAATGTGGAACAAAACAATATTTGCTATTAAGGA----------- 661 ******* *********** ******** ****** * ** consensus_12705#0 CTGCTAATGTTATTCTTGCTGTACATACAGAGTGAAATTAATTGATTAAT 3104 consensus_12705#1 -------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||