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Oryza sativa
cluster # 12710 cluster # 12710       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12710#0 length = 820 sequences # 8  
consensus_12710#1 length = 725 sequences # 2  
consensus_12710#2 length = 525 sequences # 1  

consensusID : consensus_12710#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 820
fasta sequence
                              [GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCAGCACGGCCCCGACCACTTCGTCTACCCCGTCGCCGCGCACGGTATCGGATGTCAGCACACCGGCTAGACCATATATACAAACTAGTGTTAACTTTTACCAGTTCACTTCGCATTTCACGAGACTGACACGGCGTGTACATGTGCGTGTGTCACGGAAGCAGCCATAGCCTACGCCCCCGCCTCGGCGATCGAGTCCATGAGGAA-GCGCAGGAGGAGATCTCCAGGAAGGTCGT-TCGCGCGCGCTCGAC-GTCTGCAA-CAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAG-GCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTC-TTGGGCAGCGTCAGCGACTACCTCGTC-CATCACGCGTGCT--GCCCCGTG-CTGGTCGTGAAGCCCA-CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG-CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC-AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG-C-AAACTGC-AA-CTGAAG--C-AATACATGAGTAGTACTTGTGGATAAAAAAAAAA]

[+] EMBL AK071321             [GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCAGCACGGCCCCGACCACTTCGTCTACCCCGTCGCCGCGCACGGTATCGGATGTCAGCACACCGGCTAGACCATATATACAAACTAGTGTTAACTTTTACCAGTTCACTTCGCATTTCACGAGACTGACACGGCGTGTACATGTGCGTGTGTCACGGAAGCAGCCATAGCCTACGCCCCCGCCTCGGCGATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCTCCAGGAAGGTCGTGTCGCGCGCGCTCGAC GTCTGCAAGCAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAG GCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTC TTGGGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGCAAACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG CAAAACTGCAAA CTGAAG  CAAATACATGAGTA                      ]
[+] EMBL BI801091             [                                                                                                                                                                                                                                                                    GGAA GC CAGGAGGAGATCTCCAGGAAGGTCGT TCGCGCGCGCTCGACGGTCTGCAA CAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGA GGCGACGCCAAGGAG GCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTC TTGGGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGC ACGTGCAAACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG C AAACTGC AA CTGAAG  C AATACATGAGTAGTACTTGTGGATATAAAAAAA ]
[+] EMBL BI804763             [                                                                                                                                                                                                                                                                    aGAA GCCCAGGAGGAGATCTCCAGGAA GTCGT TCGCGCGCGCTCGAC GTCTGCAACCAGAGAGAGGTGAGCGCGACGGGC CCATCGTGGAGGGCGACGCCAAGGAG GCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTC TTGGGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CC AGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGC GTTCTTATGTAGATGC ACGTGC AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG C AAACTGC AA CTGAAG  C AATACATGAGTAGTACTTGTGGATAAAA      ]
[+] EMBL BI801598             [                                                                                                                                                                                                                                                                                                    cT TCGCGCGCGCTCGAC GTCTGCAA CAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGA GGCGACGCCAAGGAG GCCATCTGCCA GCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAA CC CGGCCTAGGCAAGATCAAGAGGGCGTTCTTTGGGCAGCGTCAGCGACTACCTCGTCACATCACGCGTGCT  GCCCCGTG CT GTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG C AAACTGC AA CTGAAG  C AATACATGAGTAGTACTTGTGGATAAAAA     ]
[+] EMBL BI802242             [                                                                                                                                                                                                                                                                                                                                       AGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAG CCCATCTGCCA GCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCC CGGCCTAGGCAAGATCAAGAGGGCGTTC TTGGGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCT GCAGTTCTTATGTAGATGCAACGT C AACTGAAACTAATACATGGAACT CCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG C AAACT C AA CTGAAC  CAAATACATGAGTAGTACTTGTGGATAAAAAAA   ]
[+] EMBL BI804665             [                                                                                                                                                                                                                                                                                                                                                 GACGGGCGCCATCGTGGAGGGCGACGCCAAGGAGCGCCATCTGCCAGCCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTC TTGGGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCCTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTGCC AAACTGC AA CTGAAG  CAAATACATGAGTAGTACTTGTGGATAAAAAA    ]
[+] EMBL BI800981             [                                                                                                                                                                                                                                                                                                                                                  ACGGGC CCATCGTGGAGGTCGACGCCAAGGAG CCCATCTGCCA GCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAA CC CGGCCTAGGCAAGATCAAGAGGGCGTTC TT GGCAGCGTCAGCGACTACCTCGTC CATCACGCGTGCTCGGACGCGTGTCTGGTCGTGAAGCCCACCCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTT CTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGCCTGCCAGTTCTTATGTAGATGCAACGTGC AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTC C AAACT C AA CTGAAG  C AATACATGAGTAGTACTTGTGGATAAAAAAAAAA]
[+] EMBL BI803169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGCGTGCT  GCCCCGTG CTGGTCGTGAAGCCCA CCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGG CTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC AACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTG C AAACTGC AACCTGAAGCCC AATACATGAGTAGTACTTGTGGATAAAAAAA   ]


>consensus_12710#0 GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCA GCACGGCCCCGACCACTTCGTCTACCCCGTCGCCGCGCACGGTATCGGATGTCAGCACAC CGGCTAGACCATATATACAAACTAGTGTTAACTTTTACCAGTTCACTTCGCATTTCACGA GACTGACACGGCGTGTACATGTGCGTGTGTCACGGAAGCAGCCATAGCCTACGCCCCCGC CTCGGCGATCGAGTCCATGAGGAAGCGCAGGAGGAGATCTCCAGGAAGGTCGTTCGCGCG CGCTCGACGTCTGCAACAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGC CAAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAG CCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTCGTCCA TCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGCACGACAAGTGAACTCG ATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTT GCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAATAAAAGGA TATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGCAACTGAAACTAAT ACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTGCAAACTGCAAC TGAAGCAATACATGAGTAGTACTTGTGGATAAAAAAAAAA



consensusID : consensus_12710#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 725
fasta sequence
                              [GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCAGCACGGCCCCGACCACTTCGTCTACCCCGTCGCCCGCGCACGCCATAGCCTACG-CCCCCGCCTCGGCGATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCTCCAGGAAGGTCGTGTCGCGCGCGCTTCGACGTCTGCAAGCAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGTCACGCACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGCAAACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTGCAAAACTNNAAACTGAAGCAAATACATGAGTAGTACTTGTGGATAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU182596             [GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCAGCACGGCCCCGACCACTTCGTCTACCCCGTCGCCCGCGCACGCCATAGCCTACG CCCCCGCCTCGGCGATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCTCCAGGAAGGTCGTGTCGCGCGCGCTTCGACGTCTGCAAGCAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C99210               [                                               TCTTCCACGCNCAGCACGGCCCCGACCA TTCGTNTACCCC TCG CCGCGCACGCNATAGCTTACGCCCCCCGCTTCGGCNATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCTCCAGGAAGGTCGTNTCGCGCGCGC TCGACGTCTGCAAGCAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGCGACGCCAAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGTCACGCACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGCAAACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTGCAAAACTNNAAACTGAAGCAAATACATGAGTAGTACTTGTGGATAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12710#1 GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCA GCACGGCCCCGACCACTTCGTCTACCCCGTCGCCCGCGCACGCCATAGCCTACGCCCCCG CCTCGGCGATCGAGTCCATGAGGAAGGCGCAGGAGGAGATCTCCAGGAAGGTCGTGTCGC GCGCGCTTCGACGTCTGCAAGCAGAGAGAGGTGAGCGCGACGGGCGCCATCGTGGAGGGC GACGCCAAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTCGTCCTG GGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTC GTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGTCACGCACAAGT GAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCT ATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAAT AAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGCAAACTG AAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAATGTGCAA AACTNNAAACTGAAGCAAATACATGAGTAGTACTTGTGGATAAAAAAAAAAAAAAAAAAA AAAAA



consensusID : consensus_12710#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 525
fasta sequence
                              [CTTTCGTGCTGTTTCGATCCCATGAGAAAGGCCCCAGGAGGAGATCTCCCAGGAAGTTCGTTCGCGCGCGTTCGACGTCTGGCAAACCAGTAGAGAGTTGAGCGCGACGGGCGCCCATCGTGGAGGCGACGCCCAAGGAGCCCATCTGCCAGCCGTGGAGGAGATGCACCCGACATGCTCGTCCTGGGAACCCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGCCAGTTCTTATGTAGATGCAACGTGCCAACTGAAACTAATACCTGGAACTGCCGTTGAAGCTTCCAAAAAAAAAA]

[+] EMBL BI803535             [CTTTCGTGCTGTTTCGATCCCATGAGAAAGGCCCCAGGAGGAGATCTCCCAGGAAGTTCGTTCGCGCGCGTTCGACGTCTGGCAAACCAGTAGAGAGTTGAGCGCGACGGGCGCCCATCGTGGAGGCGACGCCCAAGGAGCCCATCTGCCAGCCGTGGAGGAGATGCACCCGACATGCTCGTCCTGGGAACCCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGCACGACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGCCAGTTCTTATGTAGATGCAACGTGCCAACTGAAACTAATACCTGGAACTGCCGTTGAAGCTTCCAAAAAAAAAA]


>consensus_12710#2 CTTTCGTGCTGTTTCGATCCCATGAGAAAGGCCCCAGGAGGAGATCTCCCAGGAAGTTCG TTCGCGCGCGTTCGACGTCTGGCAAACCAGTAGAGAGTTGAGCGCGACGGGCGCCCATCG TGGAGGCGACGCCCAAGGAGCCCATCTGCCAGCCGTGGAGGAGATGCACCCGACATGCTC GTCCTGGGAACCCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGACTA CCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGCACGACAA GTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGACTTGG CTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTTGAAA ATAAAAGGATATGTTAAGCTTCTGAGGCTGCCAGTTCTTATGTAGATGCAACGTGCCAAC TGAAACTAATACCTGGAACTGCCGTTGAAGCTTCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12710#0      GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCA 60
consensus_12710#1      GCTGGACAACGTCATCGGGCGCCGCGCCGGCGCCGTTTCGGTCGTCGTCGTCCACGCGCA 60
consensus_12710#2      ------------------------------------------------------------
                                                                                   

consensus_12710#0      GCACGGCCCCGACCACTTCGTCTACCCCGTCGCCGCGCACGGTATCGGATGTCAGCACAC 120
consensus_12710#1      GCACGGCCCCGACCACTTCGTCTACCCCGTCGCC-------------------------- 94
consensus_12710#2      ------------------------------------------------------------
                                                                                   

consensus_12710#0      CGGCTAGACCATATATACAAACTAGTGTTAACTTTTACCAGTTCACTTCGCATTTCACGA 180
consensus_12710#1      ------------------------------------------------------------
consensus_12710#2      ------------------------------------------------------------
                                                                                   

consensus_12710#0      GACTGACACGGCGTGTACATGTGCGTGTGTCACGGAAGCAGCCATAGCCTACGCCCCCGC 240
consensus_12710#1      -----------CGCGCAC----------------------GCCATAGCCTACGCCCCCGC 121
consensus_12710#2      -----------------------------------------------------CTTTCGT 7
                                                                            *   ** 

consensus_12710#0      CTCGGCGATCGAGTCCATGAGGAAG--CGCAGGAGGAGATCTCC-AGGAAGGTCGT-TCG 296
consensus_12710#1      CTCGGCGATCGAGTCCATGAGGAAGG-CGCAGGAGGAGATCTCC-AGGAAGGTCGTGTCG 179
consensus_12710#2      GCTGTT--TCGATCCCATGAGAAAGGCCCCAGGAGGAGATCTCCCAGGAAGTTCGT-TCG 64
                          *    ****  ******* ***  * *************** ****** **** ***

consensus_12710#0      CGCGCGCT-CGACGTCTGC--AA-CAG-AGAGAGGTGAGCGCGACGGGCGCC-ATCGTGG 350
consensus_12710#1      CGCGCGCTTCGACGTCTGC--AAGCAG-AGAGAGGTGAGCGCGACGGGCGCC-ATCGTGG 235
consensus_12710#2      CGCGCGTT-CGACGTCTGGCAAACCAGTAGAGAGTTGAGCGCGACGGGCGCCCATCGTGG 123
                       ****** * *********   ** *** ****** ***************** *******

consensus_12710#0      AGGGCGACGCC-AAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTC 409
consensus_12710#1      AGGGCGACGCC-AAGGAGGCCATCTGCCAGGCCGTGGAGGAGATGCACGCCGACATGCTC 294
consensus_12710#2      AGG-CGACGCCCAAGGAGCCCATCTGCCAG-CCGTGGAGGAGATGCAC-CCGACATGCTC 180
                       *** ******* ****** *********** ***************** ***********

consensus_12710#0      GTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGAC 469
consensus_12710#1      GTCCTGGGAAGCCGCGGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGAC 354
consensus_12710#2      GTCCTGGGAACCC--GGCCTAGGCAAGATCAAGAGGGCGTTCTTGGGCAGCGTCAGCGAC 238
                       ********** **  *********************************************

consensus_12710#0      TACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCG-CACG- 527
consensus_12710#1      TACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCGTCACGC 414
consensus_12710#2      TACCTCGTCCATCACGCGTGCTGCCCCGTGCTGGTCGTGAAGCCCACCAAGGCG-CACG- 296
                       ****************************************************** **** 

consensus_12710#0      ACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGAC 587
consensus_12710#1      ACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGAC 474
consensus_12710#2      ACAAGTGAACTCGATCTGCTGCTCCTTTGCTGCCTGATGGATGTCCTGTGAAGTGAAGAC 356
                       ************************************************************

consensus_12710#0      TTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTT 647
consensus_12710#1      TTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTT 534
consensus_12710#2      TTGGCTATCTTTTGCTACTGATTACTCATGGAGCCGGTGGCTGCTGTTATTACTTGTGTT 416
                       ************************************************************

consensus_12710#0      GAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC 707
consensus_12710#1      GAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGGCAGTTCTTATGTAGATGCAACGTGC 594
consensus_12710#2      GAAAATAAAAGGATATGTTAAGCTTCTGAGGCTGCCAGTTCTTATGTAGATGCAACGTGC 476
                       ********************************** *************************

consensus_12710#0      AA-CTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAAT 766
consensus_12710#1      AAACTGAAACTAATACATGGAACTGCCGTTGAAGCTTCTGAGCTCCTGTGTAGATGTAAT 654
consensus_12710#2      CAACTGAAACTAATACCTGGAACTGCCGTTGAAGCTTCCAAAAAAAAAA----------- 525
                        * ************* *********************  *                   

consensus_12710#0      GTGCAAA--CTGCAACTGAAGCAA-TACATGAGTAGTACTTGTGGATAAAAAAAAAA--- 820
consensus_12710#1      GTGCAAAACTNNAAACTGAAGCAAATACATGAGTAGTACTTGTGGATAAAAAAAAAAAAA 714
consensus_12710#2      ------------------------------------------------------------
                                                                                   

consensus_12710#0      -----------
consensus_12710#1      AAAAAAAAAAA 725
consensus_12710#2      -----------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)