These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12718#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1847 fasta sequence [ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGTGGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATTACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAATGACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGCATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAAAATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGTATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG-TGTCCGCCGC-CGGCATCGGGGAAGAGGACA-GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA-GTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA-AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC--ATTTTGA-ATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAAAAA] [+] EMBL AK103700 [ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGTGGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATTACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAATGACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGCATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAAAATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGTATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCCGAAGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACCGGATTTTGA ATCACTTTCTAAAAAAGAATAAAAGAGATGTGTGAA ] [+] EMBL CA755438 [ CCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAGGGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGATCAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAATATCCTCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGT ] [-] EMBL CB620916 [ TTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCTGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCTGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTAGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACACCGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTCGTTAATAATGTAATTATTTTTTACCTCTGTTTACGAGTTTACTAGTACC ATTTAGAGATCc ] [-] EMBL CB620949 [ TTCGGGCTGGCGAGGCTGGGCGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCTGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACACCGGTACCAGCGAGACAAAGATTTCGTACATATTTTATCGTCATAATGGGGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGACTTTACTAGTACC TTTTaa ] [-] EMBL CB678030 [ CACGCCCGGGTACGCGGCGCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGATGGTGCTGTTCGAGGTGCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCGGAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAGTGCGTCG TGTCCGCCGC CGGCATCGGGGAAGAGGACA GGGCGAAGGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCA GTTCCAGCCGTCGGCGCGGCCGAAGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCA AGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAAGATTTCGTACAT ] [+] EMBL BI811683 [ AGTGC TCGTTGTCCCCTGCACGGCATCGGGGAAGAGGACACGGGCGAAGGCGGAGATGATGTGCAA GTGGCCCTGTGGTGCGTGCACGTTCCAGCCGTCGGCGC GCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCACAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACCAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGC ATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC TTTTGA ATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAA ] [+] EMBL BI811875 [ GGT CGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCCAAAAGTCC CGGACGTCATGGTTGAATAGTCTAAGTCCC AGTGAAAATGTTGACCCTTCTCCCTTTGTACCACGGTACCAGCGAGACCAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTAATAATGTAATTATTTTTTACCTCTGTTTATGAGTTTACTAGTACC CTTTTGA ATCCCTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTTCGTAGGAAAAAAAA] consensusID : consensus_12718#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [CCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAATATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACCAGTTCTTGGAGAACGGCTCCCTGGAG] [+] EMBL CB678029 [CCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAATATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCGCCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGTCTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTACCAGTTCTTGGAGAACGGCTCCCTGGAG] consensusID : consensus_12718#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTCTGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGTGGGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTTCACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACACACACACCCAAAAAA] [+] EMBL CF316449 [TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATCCAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTCTGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGTGGGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTC ] [-] EMBL CF316448 [ ATCCTCCATGAGATGAGCTCAATGATTTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATCAAGCTCAAGGAAGTTATCTAGATTCTACTAGACAAGTAAGCCTTTTTTTTTTCTCTGTGCCCAGTTGATCTCTTCTTCATTTGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCCTCAGCTGCAAACCAAGTTCTACTGGTTGTTCTTCTCCTTTTCAGTGGAATCAGACCAAGCCTTTTACGTGTTCTTGAAAAACATCGTTCCGAGTCTTGTAGACACCATAAACAAACCCAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGATTCTTTTGAGTTCTGAGATGATTTTGTTCATGCATGAAGTCCTTTATGAAGTTTATTATGGTGAACTAAATATTTTTTCTGTAATCCTTAAATTTAAGCACGT GGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTTCACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACACACACACCCAAAAAA] consensusID : consensus_12718#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence [ATTGTCCTGTTCAAGGTGCTGGCGCGCCGACTACGNCCTCCCGCCAGCGGAGACCAGAGTGTTCCCCAAGTGGTGTGGGACAGGTACGACAGGGGGACATGGAGTGCTCGTGTCCGCCCCGGCATCGGGGAAGAGGACAGGGCGAAGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCCGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTCNTAATGTAATTATTTTTTAAAAAAAAAAAA] [+] EMBL BM038202 [ATTGTCCTGTTCAAGGTGCTGGCGCGCCGACTACGNCCTCCCGCCAGCGGAGACCAGAGTGTTCCCCAAGTGGTGTGGGACAGGTACGACAGGGGGACATGGAGTGCTCGTGTCCGCCCCGGCATCGGGGAAGAGGACAGGGCGAAGCGGAGATGATGTGCAAGGTGGCGCTGTGGTGCGTGCAGTTCCAGCCGTCGGCCGCCGACGATGAGCAGCGTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTACGTCATGAGCGGCGGCAGCGGCAGCTCGACGCTGACGAGCAGCAGCACGAACCTGAGCAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTCCTGCCAAAAGTCCACGGACGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCCTTCTCCCTTTGTACAACGGTACCAGCGAGACAAGATTTCGTACATATTTTATCGTCATAATGTTGTTGCAATTATATTTGTTCNTAATGTAATTATTTTTTAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12718#0 ATCAAAAGCAAACTAACTGTGCTCAGCTCAGATTAATTCTGAATTAATCAAACTAATGGT 60 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 GGAACTGGTGAAATGTGAATAGTACAAACTATCAATGTTACCTTACAATCAAGATATATT 120 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 ACTGCTAATTAAAATGTGCAATGATATCTCTGATTTTTATGCTTGTCTGATCTATGCAAT 180 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 GACGTACTAGTACGCAAACTCCAGAGTAAAGACAAGCTCAATTAGAGAACGAATGTGAGC 240 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 ATGTCTACTGCTGTTGCCATAAGTAAGTACCAAGATTAATTAGTACTATCACCATGGCAA 300 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 AATAAAAGACCAAGATTTTGCTTATCTAACTGTTCGTCTCACCTCACTGGTTTCTTCAGT 360 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 ATCGTCAGTCTCGGCAACCGCGGCTGCAGTAGTGATGCTCGCTCTGATCAAGCGATGCCG 420 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CCGCTACAGGAGGAAGATGAAGAAGAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGA 480 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 ACAGCACCGCGAGATGGAAGCCCGCGACGCGGCGGACAGCGTGATGATCGAGATCGGCCC 540 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CGTGGAGAAGTTCCTCAACGAGATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCA 600 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 GCTGGCGGCGTGCACCGGGAACTACTCGTCGGAGCTCGGCTCCGGCGGGTTCGGCGTGGT 660 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CTACAGGGGGGAGCTGCCCAAAGGCCTGCAGGTCGCCGTGAAGGTGCTCAAGGTGTCCAT 720 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 GAACAAGAAGGTCCAGGAGGCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCA 780 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CGTCCACCTCGTCAGGCTCTACGGCTTCTGCTTCGACGCCGACACCAAGGCGCTGGTCTA 840 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CGAGTTCTTGGAGAACGGCTCGCTGGAGAAGTACCTCTACGGCGGCGGCGGCGAGGACAG 900 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 GGGGAAGAAGCTGGAGTGGCGGACGCTGCACGACATCGCCGTCGGCACGGCGAAGGGGAT 960 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CAGGTACCTCCACGAGGAGTGCCAGCAGCGGATCGTGCACTACGACATCAAGCCGGCGAA 1020 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 TATCCCCCTCACCGCCGACTTCACCCCGAAGGTTGCCGACTTCGGGCTGGCGAGGCTGGG 1080 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------------------------ consensus_12718#2 ------------------------------------------------------------ consensus_12718#0 CGAGCGGGAGAACACGCACATGTCGCTGACGGGCGGGCGCGGCACGCCCGGGTACGCGGC 1140 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 ------------------------------------------CCTCTGATCCTCTCCATC 18 consensus_12718#2 ----------------------TGAAGGAGTAGAAAAGACATCCTCTGATCCTCTCCATC 38 consensus_12718#0 GCCGGAGCTGTGGATGGCGCTACCGGCGACGGAGAAGTGCGACGTGTACAGCTTCGGGAT 1200 consensus_12718#3 ----------------------------------------------------------AT 2 consensus_12718#1 CAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGAT 78 consensus_12718#2 CAGAGAGGCAAAACGGGGCCTCTTATCATTTTGGATCCTCCATGAGATGAGCTCAATGAT 98 ** consensus_12718#0 GGTGCTGTTCGAGGT-----GCTGGGGCGGCGGCGGAACTACGACCTCGCCGCGCAGGCG 1255 consensus_12718#3 TGTCCTGTTCAAGGT-----GCTGGCGCGCCG-----ACTACGNCCTCC---CGCCAGCG 49 consensus_12718#1 TTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATC--AAGCTCAAG 136 consensus_12718#2 TTAGCTGCGAAAAACAGCTCGTCGACATGCAGTAAGAATGAAGAACATC--AAGCTCAAG 156 *** * * * * * * * * * ** * consensus_12718#0 GAGAGCCAGGAGTGGTTCCCCAAGTGGGTGTGGGACAGGTACGAGCAGGGGGACATGGAG 1315 consensus_12718#3 GAGACC--AGAGTG-TTCCCCAAGTGG-TGTGGGACAGGTACGA-CAGGGGGACATGGAG 104 consensus_12718#1 GAAGTT--ATCTAGATTCTACTAGACAATATCGT-CAGTCTCGG-CAACCGCGGCTGCAG 192 consensus_12718#2 GAAGTT--ATCTAGATTCTACTAGACAA-GTAAGCCTTTTTTTTTTCTCTGTGCCCAGTT 213 ** * *** * ** * * * consensus_12718#0 TGCGTCGTGTCCGCCGCCGGCATCGGGGAAGAGGACAGGGCGAAGGCGGAGATG-ATGTG 1374 consensus_12718#3 TGC-TCGTGTCCGCC-CCGGCATCGGGGAAGAGGACAGGGCGAAG-CGGAGATG-ATGTG 160 consensus_12718#1 TAG-TGATGCTCGCT-CTG--ATCAAGCGATGCCGCCGCTACAGGAGGAAGATG-AAGAA 247 consensus_12718#2 GATCTCTTCTTCATT-TGGTTTTCATAGTTCAGTTGTGTTGTGATCTTCTTCTGTGTTCC 272 * * * * ** * ** consensus_12718#0 CAAGGTGGC-GCTGTGGT-GCGTGCAGTTCCAGCCGTCGGCGCGGCCGACGATGAGCAGC 1432 consensus_12718#3 CAAGGTGGC-GCTGTGGT-GCGTGCAGTTCCAGCCGTCGGCC--GCCGACGATGAGCAGC 216 consensus_12718#1 GAAGATGCTAGCTAGGATCGCCCACGAGGCGACCGAACAGCACCGC-GAGATGGAAGCCC 306 consensus_12718#2 TCAGCTGCAAACCAAGTT---CTAC----TGGTTGTTCTTCTCCTTTTCAGTGGAATCAG 325 ** ** * * * * * * ** consensus_12718#0 GTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTAC 1492 consensus_12718#3 GTGGTGCGGATGCTGGAGGGGGAGATGGCCATCGTCCCGCCGGTGAACCCCTTCCACTAC 276 consensus_12718#1 GCGACGCGGCGGACAGCGTGAT-GATCGAGATCGGCCCCGTGGAGAAGTTCCTCAACGAG 365 consensus_12718#2 ACCAAGCCTTTTAC-GTGTTCTTGAAAAACATCGTTCC-------GAGTCTTGTA--GAC 375 ** * * ** **** ** * * consensus_12718#0 GTCATGAGCG-GCGGCAGCGGCAGCTCGACGCTGACGAGC-AGCAGCACGAACCTGAG-- 1548 consensus_12718#3 GTCATGAGCG-GCGGCAGCGGCAGCTCGACGCTGACGAGC-AGCAGCACGAACCTGAG-- 332 consensus_12718#1 ATCCTCAGCGAGAAGCCGATGCGCTTCACCTCCGAGCAGCTGGCGGCGTGCACCGGGAAC 425 consensus_12718#2 ACCATAAACA-AACACAGTTGACATGTGTTCCTGTCATGCAGGCCACAAGTGAT------ 428 * * * * * * * * * ** ** * * consensus_12718#0 ---CAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTC--CTGCCAAA 1603 consensus_12718#3 ---CAGCGGGGGCACCACTACAGGAAGCAGCGAGGTGGCGGTCAGCCTTC--CTGCCAAA 387 consensus_12718#1 TACTCGTCGGAGCTCGGCTCCGGCGGGTT-CGGCGTGGTCTACAGGGGGGAGCTGCCCAA 484 consensus_12718#2 ---TCTTTTGAGTTC---TGAGATGATTT------TGTTCATGCATGAAGTCCTTTCTGA 476 * * * * ** ** * * consensus_12718#0 AAGTCCACGGA-CGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCC----- 1657 consensus_12718#3 A-GTCCACGGA-CGTCATGGTTGAATAGTCTAAGTCCAAGTGAAAATGTTGACCC----- 440 consensus_12718#1 AGGCCTGCAGGTCGCCGTGA--AGGTGCTCAAGGTGTCCATGAACAAGAAGGTCCAGGAG 542 consensus_12718#2 AGTTTATTATGGTGAACTAAATATTTTTTCTGTA-ATCCTTAAATTTAAGCACGT----G 531 * * * * ** * ** consensus_12718#0 -TTCTCCCTTTGTACAACGGTACCAGCGAGACAAAG-ATTTCGTACATATTTTATCGTCA 1715 consensus_12718#3 -TTCTCCCTTTGTACAACGGTACCAGCGAGACAA-G-ATTTCGTACATATTTTATCGTCA 497 consensus_12718#1 GCGTTCATGGCGGAGATCGGCACCATCGGGAGGACGTACCACGTCCACCTCGTCAGGCTC 602 consensus_12718#2 GGTGTAGTTCCATCTGTTGGCACATTTGTAAACTTAATTCGTATTTTTTTTTTTTGTCTT 591 * ** ** * * * * * consensus_12718#0 TAATGTTGTTGCAATTATATTTGT--TAATAATGTAATTATTTTTTACCTCTGTTTATGA 1773 consensus_12718#3 TAATGTTGTTGCAATTATATTTGT--TCNTAATGTAATTATTTTTTAAAAAAAAAAAA-- 553 consensus_12718#1 TACGGCTTCTGCTTCGACGCC-GA--CACCAAGGCGCTGGTCTACCAGTTCTTGGAGAAC 659 consensus_12718#2 CACGCCGGCCGCCGGGCGGCTAAATCCGTACAAAGAATAATCGCCCACACTCACCCACAC 651 * ** * * * * consensus_12718#0 GTTTACTAGTACCATTTTGAATCACTTTCTAAAAAAGAATAAAAGAAATGTGTGAATTTT 1833 consensus_12718#3 ------------------------------------------------------------ consensus_12718#1 GGCTCCCTGGAG------------------------------------------------ 671 consensus_12718#2 ACACACCCAAAAAA---------------------------------------------- 665 consensus_12718#0 CGTAGGAAAAAAAA 1847 consensus_12718#3 -------------- consensus_12718#1 -------------- consensus_12718#2 -------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||