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Oryza sativa
cluster # 12719 cluster # 12719       Sequences # 11       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12719#0 length = 1922 sequences # 1  
consensus_12719#1 length = 1470 sequences # 1  
consensus_12719#2 length = 807 sequences # 4  
consensus_12719#3 length = 644 sequences # 4  
consensus_12719#4 length = 524 sequences # 1  

consensusID : consensus_12719#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1922
fasta sequence
                              [TAGAGATAGAGATGAAGCCCAAGCCCTTCAAGGAGGAGTTCACCCTGGAGGAGAGGGCCAAGGAGTCGGCCTCCATGATCGCCTCCTACCCCGCCAGGATCCCCGTATGTGATGTGATGTGATGTCCACAATTGTTTCTCTCTCACTACTTGTTTCTCCTACCAGTTTCCCCTTCCTTCAAGTTCCTCATGCTGCTACAGTACCACCTATACATAACTCAGCCGCCATGCCATCAAATTTTGCAAACTCACATTCTTCGCACGCACTCCAATCAACATTATATCATCACTGTGCCACAATAACCTCGCTCCTATATTTTTTTTGGAATTAATCACGGGGGGGGGGAGATTCCCCACCTAAATTATATTGGAAAAAAGGAAGAGGGGGTACAACCGGAAGCATTACAGCATTAGTCGGAGCGAATAGAAGAAGAAAGAAGACTTTTCCAGTTAGTCACAACCGGCCTATCTTCTCTACTGAGGTGCTCAGCCCACAAAGTAGCGTCCTCAATACATTTAGCCACTAACCTTGTCCGGGAGTTAGGAAGCCCCCGGAAAACAACGTCGTGTCTATGGATCCAAAGTCCCCAGAAACAAAGTAAGAAAAAAACTTGGAAGTGCTTGACAGGCAAGTGGCAGGGAGCAGCGAGGTCAGCAAGATCTTGAACATTCGAAACCACAGATATACGCAAGGCTCTCCAGAATTCCTGGGCGAATTGACATTGGAGAAAGAGATGAGTCACAGTTTCGTCAGCACAGTTGCAGACGATGCACCTCGCTCCTATATATGTCGTCATGTGACTGAAGATGTTATTCAAATCCCTTCATGTTTCTCTTGAGCTGTCCAACAACTCTAGCGAAACTTTACTGAAAAGAAAATCAAATAGATGCTGCATACATGTTCTGTTCTGTTGATTCTCCGCTGTGTTGGTTAGTTATTTCCAACACAAGTACCCATTTGCGTGCGGCAGTTTCTTGTCAATGGTTTGGGTCAACATTTTCAAGCACTTAATGAGAGGATAGAGGTGCTGACTGAATTACCTATTCCATTTTTATTCATCTAGCAAGTAGACTGTGATCACATCATTTTCCATTATCTTAACATTGTGCAAAAAGAAATTAGTTGGGCTCTGTTATTCGCAAGTTATTGGCCATTGTATTTCCTACCCTGTTTAAATGTTGCAGATTGAATCAGGGCTCAGGGTCAATCAGGGCTCAGGGTCAAACTCATGGAGCATTCTTGGGGGTATTCCTAGTCCTAGATAGAAATAGTTCAATTTGCACTACCTACCCTTTTGTCTCTGCACGTTAGCTTCAGTTAACTCTGTTGTGAATCAGTTTTGCAAGTACTGGATCCTGAAAACTAAACCAAAACCAGAATTCGTACCTAAACCATCTGTGTCGTTGAATTCCACAGGAACACATCAAAACTGATTACTTTTCATTTGTGCATTTTCTTCTGAAGTGTGTTTCTTGAACATTATGCTAAGATTCTAGTATCTATGATTGCAGGTCATTGTTGAGAGGTTTTCAAGAAGTAGTCTTCCAGAAATGGAGAAGCGCAAGTACCTAGTTCCATGTGACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCAAGGTTACATCTGTCTCCAGGAATAGCACTGTTTGTGTTTGTCAACAACACGTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTACGAGTCATACAAAGATGAGGACGATGGCTTCCTCTACATGTGCTACAGCAGCGAGAAGACATTCGGCTGACCAACTCATCCGTGGAGATCTGCTTTCTTTTCTTTCATGTGTATGTGTTGCTCGAACATAAAGATGCATGCATGTGCATATATTAGTATCATTAGAAAATGCATGAAGTGTTATACTGTACACTGATTAATGTGAAATGAAATACAC]

[+] EMBL AK065550             [TAGAGATAGAGATGAAGCCCAAGCCCTTCAAGGAGGAGTTCACCCTGGAGGAGAGGGCCAAGGAGTCGGCCTCCATGATCGCCTCCTACCCCGCCAGGATCCCCGTATGTGATGTGATGTGATGTCCACAATTGTTTCTCTCTCACTACTTGTTTCTCCTACCAGTTTCCCCTTCCTTCAAGTTCCTCATGCTGCTACAGTACCACCTATACATAACTCAGCCGCCATGCCATCAAATTTTGCAAACTCACATTCTTCGCACGCACTCCAATCAACATTATATCATCACTGTGCCACAATAACCTCGCTCCTATATTTTTTTTGGAATTAATCACGGGGGGGGGGAGATTCCCCACCTAAATTATATTGGAAAAAAGGAAGAGGGGGTACAACCGGAAGCATTACAGCATTAGTCGGAGCGAATAGAAGAAGAAAGAAGACTTTTCCAGTTAGTCACAACCGGCCTATCTTCTCTACTGAGGTGCTCAGCCCACAAAGTAGCGTCCTCAATACATTTAGCCACTAACCTTGTCCGGGAGTTAGGAAGCCCCCGGAAAACAACGTCGTGTCTATGGATCCAAAGTCCCCAGAAACAAAGTAAGAAAAAAACTTGGAAGTGCTTGACAGGCAAGTGGCAGGGAGCAGCGAGGTCAGCAAGATCTTGAACATTCGAAACCACAGATATACGCAAGGCTCTCCAGAATTCCTGGGCGAATTGACATTGGAGAAAGAGATGAGTCACAGTTTCGTCAGCACAGTTGCAGACGATGCACCTCGCTCCTATATATGTCGTCATGTGACTGAAGATGTTATTCAAATCCCTTCATGTTTCTCTTGAGCTGTCCAACAACTCTAGCGAAACTTTACTGAAAAGAAAATCAAATAGATGCTGCATACATGTTCTGTTCTGTTGATTCTCCGCTGTGTTGGTTAGTTATTTCCAACACAAGTACCCATTTGCGTGCGGCAGTTTCTTGTCAATGGTTTGGGTCAACATTTTCAAGCACTTAATGAGAGGATAGAGGTGCTGACTGAATTACCTATTCCATTTTTATTCATCTAGCAAGTAGACTGTGATCACATCATTTTCCATTATCTTAACATTGTGCAAAAAGAAATTAGTTGGGCTCTGTTATTCGCAAGTTATTGGCCATTGTATTTCCTACCCTGTTTAAATGTTGCAGATTGAATCAGGGCTCAGGGTCAATCAGGGCTCAGGGTCAAACTCATGGAGCATTCTTGGGGGTATTCCTAGTCCTAGATAGAAATAGTTCAATTTGCACTACCTACCCTTTTGTCTCTGCACGTTAGCTTCAGTTAACTCTGTTGTGAATCAGTTTTGCAAGTACTGGATCCTGAAAACTAAACCAAAACCAGAATTCGTACCTAAACCATCTGTGTCGTTGAATTCCACAGGAACACATCAAAACTGATTACTTTTCATTTGTGCATTTTCTTCTGAAGTGTGTTTCTTGAACATTATGCTAAGATTCTAGTATCTATGATTGCAGGTCATTGTTGAGAGGTTTTCAAGAAGTAGTCTTCCAGAAATGGAGAAGCGCAAGTACCTAGTTCCATGTGACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCAAGGTTACATCTGTCTCCAGGAATAGCACTGTTTGTGTTTGTCAACAACACGTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTACGAGTCATACAAAGATGAGGACGATGGCTTCCTCTACATGTGCTACAGCAGCGAGAAGACATTCGGCTGACCAACTCATCCGTGGAGATCTGCTTTCTTTTCTTTCATGTGTATGTGTTGCTCGAACATAAAGATGCATGCATGTGCATATATTAGTATCATTAGAAAATGCATGAAGTGTTATACTGTACACTGATTAATGTGAAATGAAATACAC]


>consensus_12719#0 TAGAGATAGAGATGAAGCCCAAGCCCTTCAAGGAGGAGTTCACCCTGGAGGAGAGGGCCA AGGAGTCGGCCTCCATGATCGCCTCCTACCCCGCCAGGATCCCCGTATGTGATGTGATGT GATGTCCACAATTGTTTCTCTCTCACTACTTGTTTCTCCTACCAGTTTCCCCTTCCTTCA AGTTCCTCATGCTGCTACAGTACCACCTATACATAACTCAGCCGCCATGCCATCAAATTT TGCAAACTCACATTCTTCGCACGCACTCCAATCAACATTATATCATCACTGTGCCACAAT AACCTCGCTCCTATATTTTTTTTGGAATTAATCACGGGGGGGGGGAGATTCCCCACCTAA ATTATATTGGAAAAAAGGAAGAGGGGGTACAACCGGAAGCATTACAGCATTAGTCGGAGC GAATAGAAGAAGAAAGAAGACTTTTCCAGTTAGTCACAACCGGCCTATCTTCTCTACTGA GGTGCTCAGCCCACAAAGTAGCGTCCTCAATACATTTAGCCACTAACCTTGTCCGGGAGT TAGGAAGCCCCCGGAAAACAACGTCGTGTCTATGGATCCAAAGTCCCCAGAAACAAAGTA AGAAAAAAACTTGGAAGTGCTTGACAGGCAAGTGGCAGGGAGCAGCGAGGTCAGCAAGAT CTTGAACATTCGAAACCACAGATATACGCAAGGCTCTCCAGAATTCCTGGGCGAATTGAC ATTGGAGAAAGAGATGAGTCACAGTTTCGTCAGCACAGTTGCAGACGATGCACCTCGCTC CTATATATGTCGTCATGTGACTGAAGATGTTATTCAAATCCCTTCATGTTTCTCTTGAGC TGTCCAACAACTCTAGCGAAACTTTACTGAAAAGAAAATCAAATAGATGCTGCATACATG TTCTGTTCTGTTGATTCTCCGCTGTGTTGGTTAGTTATTTCCAACACAAGTACCCATTTG CGTGCGGCAGTTTCTTGTCAATGGTTTGGGTCAACATTTTCAAGCACTTAATGAGAGGAT AGAGGTGCTGACTGAATTACCTATTCCATTTTTATTCATCTAGCAAGTAGACTGTGATCA CATCATTTTCCATTATCTTAACATTGTGCAAAAAGAAATTAGTTGGGCTCTGTTATTCGC AAGTTATTGGCCATTGTATTTCCTACCCTGTTTAAATGTTGCAGATTGAATCAGGGCTCA GGGTCAATCAGGGCTCAGGGTCAAACTCATGGAGCATTCTTGGGGGTATTCCTAGTCCTA GATAGAAATAGTTCAATTTGCACTACCTACCCTTTTGTCTCTGCACGTTAGCTTCAGTTA ACTCTGTTGTGAATCAGTTTTGCAAGTACTGGATCCTGAAAACTAAACCAAAACCAGAAT TCGTACCTAAACCATCTGTGTCGTTGAATTCCACAGGAACACATCAAAACTGATTACTTT TCATTTGTGCATTTTCTTCTGAAGTGTGTTTCTTGAACATTATGCTAAGATTCTAGTATC TATGATTGCAGGTCATTGTTGAGAGGTTTTCAAGAAGTAGTCTTCCAGAAATGGAGAAGC GCAAGTACCTAGTTCCATGTGACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCAA GGTTACATCTGTCTCCAGGAATAGCACTGTTTGTGTTTGTCAACAACACGTTGCCCCAGA CTGCTCAGCTGATGGGCAGTGTGTACGAGTCATACAAAGATGAGGACGATGGCTTCCTCT ACATGTGCTACAGCAGCGAGAAGACATTCGGCTGACCAACTCATCCGTGGAGATCTGCTT TCTTTTCTTTCATGTGTATGTGTTGCTCGAACATAAAGATGCATGCATGTGCATATATTA GTATCATTAGAAAATGCATGAAGTGTTATACTGTACACTGATTAATGTGAAATGAAATAC AC



consensusID : consensus_12719#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1470
fasta sequence
                              [AACGAGGTCAGCAAGATCTTGAACATTCGAAACAACAGATGTACGCAAGGCTCTCCAGAATTCCTGAGCGAATTGGCATTGGAGAAAGAGATGAGTTGCAGTTTCGTCAGCACAGTTGCAGACGATGCACCCGGCTGTTGGAACAATGTTCTTCTTGTGCAGATTAGCCTTGGTAGGGAGCCGATCCTTAGCTAGAAGCCAGGCGAAGAATTGTACTCTCGGCGGAGCTCGATTGTCCCAGATGAAGCGCCAGTTCTTGCACAGAGGTAGGCCCATATGAGTAGAAGAATAGATAAACTTTGTGCGAAGGATCCCGGGAGCATCACGCGACGGACATAGATCAGTAGAGTTACTGAGGTAGAAGTTTTGTAGCATCTCTCTCAATCTCGCTAATTGAGTTTCAGCAGTGGATGACAGCCTGGGGGCGAACTGATCTTCAATTGGCTTCGAGAGGAACACCGCAACTGTTGCTTCCCTGTTGAGAGCATGAGAGAACAGGGGAGCAAATCGATCTTTGAAAGTACTCGAACCATACCAACAGTCATGCCAGAACGAAGTGCGTGTGCCATCCCCAACTTGAACGCGCGTTAGGCGCTGGAGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCATGCATGTTTTTAATCCCTAGACCTCCCACTTCTCTGGCAGTGCACACTTTATCCCAAGCAACAAGGCAGCTAGAGCCACTACAAGAATCATCTCCAGACCAAAGGAAAGCCCTCCGTTTTTTATCAAAAGCTTCAATTGTTCCTTTGGGAAGCAGAAGCGCCGACATTGCATAGACCGGGAGGCTATCAAGAACCGCGTTGATAAGCACAATTCTCTCTGAATAGTTGAGGAGTTTGGCTTGCCAAGAGGAGAGGTAGAAATCAGCTTTAGCTATCATGGGCCGGAGTCCAGAGATCAGCAATGTGGAGTTTGCTATGAGAGAGAGGTAGTCCGAGGTAGGAGAGGGGATAGGGAGTCCCAGTGGGGACCCAATTGATTGTCACAAAAGAGAGCAGAGCCAGAATGTTCTTGCCAGATCCGCCGTCCCCAAGAGGAGTCTGTCGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCCGGATATATAGGATGTTTAATTTCGCCCGAATGTCGGATGAGTTTCTGTAGCACATCAGCGACAAGGATGAACAGATATGGCGACATTGGGTCACCCTGTCGAACTCCTCTTTTGCAGTTGATCCAGTTCCCAGGAACGCCATTGATCATAATTGCTGACTTAGAAGTTTGTAGCAGTCTATTCGTCCAAGATCTCCAGAGGAGTGGGAATCCGCGAGCTTGAAGGATTCTGTCCAAGCTATCCCATGCAACTGAATCAAAAGCTTTCGTGAAATCCTACTTTATGACTGCAGCTGCGCATTTTCGTTTGAAACAACATTGCAGAAGCTCACT]

[-] EMBL AK112104             [AACGAGGTCAGCAAGATCTTGAACATTCGAAACAACAGATGTACGCAAGGCTCTCCAGAATTCCTGAGCGAATTGGCATTGGAGAAAGAGATGAGTTGCAGTTTCGTCAGCACAGTTGCAGACGATGCACCCGGCTGTTGGAACAATGTTCTTCTTGTGCAGATTAGCCTTGGTAGGGAGCCGATCCTTAGCTAGAAGCCAGGCGAAGAATTGTACTCTCGGCGGAGCTCGATTGTCCCAGATGAAGCGCCAGTTCTTGCACAGAGGTAGGCCCATATGAGTAGAAGAATAGATAAACTTTGTGCGAAGGATCCCGGGAGCATCACGCGACGGACATAGATCAGTAGAGTTACTGAGGTAGAAGTTTTGTAGCATCTCTCTCAATCTCGCTAATTGAGTTTCAGCAGTGGATGACAGCCTGGGGGCGAACTGATCTTCAATTGGCTTCGAGAGGAACACCGCAACTGTTGCTTCCCTGTTGAGAGCATGAGAGAACAGGGGAGCAAATCGATCTTTGAAAGTACTCGAACCATACCAACAGTCATGCCAGAACGAAGTGCGTGTGCCATCCCCAACTTGAACGCGCGTTAGGCGCTGGAGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCATGCATGTTTTTAATCCCTAGACCTCCCACTTCTCTGGCAGTGCACACTTTATCCCAAGCAACAAGGCAGCTAGAGCCACTACAAGAATCATCTCCAGACCAAAGGAAAGCCCTCCGTTTTTTATCAAAAGCTTCAATTGTTCCTTTGGGAAGCAGAAGCGCCGACATTGCATAGACCGGGAGGCTATCAAGAACCGCGTTGATAAGCACAATTCTCTCTGAATAGTTGAGGAGTTTGGCTTGCCAAGAGGAGAGGTAGAAATCAGCTTTAGCTATCATGGGCCGGAGTCCAGAGATCAGCAATGTGGAGTTTGCTATGAGAGAGAGGTAGTCCGAGGTAGGAGAGGGGATAGGGAGTCCCAGTGGGGACCCAATTGATTGTCACAAAAGAGAGCAGAGCCAGAATGTTCTTGCCAGATCCGCCGTCCCCAAGAGGAGTCTGTCGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCCGGATATATAGGATGTTTAATTTCGCCCGAATGTCGGATGAGTTTCTGTAGCACATCAGCGACAAGGATGAACAGATATGGCGACATTGGGTCACCCTGTCGAACTCCTCTTTTGCAGTTGATCCAGTTCCCAGGAACGCCATTGATCATAATTGCTGACTTAGAAGTTTGTAGCAGTCTATTCGTCCAAGATCTCCAGAGGAGTGGGAATCCGCGAGCTTGAAGGATTCTGTCCAAGCTATCCCATGCAACTGAATCAAAAGCTTTCGTGAAATCCTACTTTATGACTGCAGCTGCGCATTTTCGTTTGAAACAACATTGCAGAAGCTCACT]


>consensus_12719#1 AACGAGGTCAGCAAGATCTTGAACATTCGAAACAACAGATGTACGCAAGGCTCTCCAGAA TTCCTGAGCGAATTGGCATTGGAGAAAGAGATGAGTTGCAGTTTCGTCAGCACAGTTGCA GACGATGCACCCGGCTGTTGGAACAATGTTCTTCTTGTGCAGATTAGCCTTGGTAGGGAG CCGATCCTTAGCTAGAAGCCAGGCGAAGAATTGTACTCTCGGCGGAGCTCGATTGTCCCA GATGAAGCGCCAGTTCTTGCACAGAGGTAGGCCCATATGAGTAGAAGAATAGATAAACTT TGTGCGAAGGATCCCGGGAGCATCACGCGACGGACATAGATCAGTAGAGTTACTGAGGTA GAAGTTTTGTAGCATCTCTCTCAATCTCGCTAATTGAGTTTCAGCAGTGGATGACAGCCT GGGGGCGAACTGATCTTCAATTGGCTTCGAGAGGAACACCGCAACTGTTGCTTCCCTGTT GAGAGCATGAGAGAACAGGGGAGCAAATCGATCTTTGAAAGTACTCGAACCATACCAACA GTCATGCCAGAACGAAGTGCGTGTGCCATCCCCAACTTGAACGCGCGTTAGGCGCTGGAG AATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCATGCATGTTTTTAA TCCCTAGACCTCCCACTTCTCTGGCAGTGCACACTTTATCCCAAGCAACAAGGCAGCTAG AGCCACTACAAGAATCATCTCCAGACCAAAGGAAAGCCCTCCGTTTTTTATCAAAAGCTT CAATTGTTCCTTTGGGAAGCAGAAGCGCCGACATTGCATAGACCGGGAGGCTATCAAGAA CCGCGTTGATAAGCACAATTCTCTCTGAATAGTTGAGGAGTTTGGCTTGCCAAGAGGAGA GGTAGAAATCAGCTTTAGCTATCATGGGCCGGAGTCCAGAGATCAGCAATGTGGAGTTTG CTATGAGAGAGAGGTAGTCCGAGGTAGGAGAGGGGATAGGGAGTCCCAGTGGGGACCCAA TTGATTGTCACAAAAGAGAGCAGAGCCAGAATGTTCTTGCCAGATCCGCCGTCCCCAAGA GGAGTCTGTCGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCCGG ATATATAGGATGTTTAATTTCGCCCGAATGTCGGATGAGTTTCTGTAGCACATCAGCGAC AAGGATGAACAGATATGGCGACATTGGGTCACCCTGTCGAACTCCTCTTTTGCAGTTGAT CCAGTTCCCAGGAACGCCATTGATCATAATTGCTGACTTAGAAGTTTGTAGCAGTCTATT CGTCCAAGATCTCCAGAGGAGTGGGAATCCGCGAGCTTGAAGGATTCTGTCCAAGCTATC CCATGCAACTGAATCAAAAGCTTTCGTGAAATCCTACTTTATGACTGCAGCTGCGCATTT TCGTTTGAAACAACATTGCAGAAGCTCACT



consensusID : consensus_12719#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 807
fasta sequence
                              [GAGAGGGACTAGGGGAGGGAGGAGCTGCATTGTCGGGGTAGTTGGAGGAAGATGCCGTTGGCGGTGGGGACCGTGGGCCCCATGGCAACGTTGTTGTCAGTGTGGAGCTCCGCGCAGGAGGACACCAGCGGTGGCACGAGGTGGAGGGAGACATGGACATCCCGGCTGAAGGAGCACCGGAGAGGGAGGAGATGGTGGCTGCGGTGGCCATGTCCATTGTTGGTCACGCTTGCCGCTGCCATTGCCGAACTATCGCCTGTCTCTCACGCCATGGAAGAGAGGAGGAAGGAGAAAGGGAAAGAAGGGGAAAAGGGCAGGTCATTGTTGAGAAATTTTCGAGGAGTAATCTTCCAGAAATGGAGAAGCGCAAGTACCTGGTTCCATGTAACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTATGATTAGAAATTACAATTATGTGTTTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAATTTGTGAGGCAAATTAAGGAGAATATAGATCACTCATTTTCAAAAAAAA]

[-] EMBL CB663694             [GAGAGGGACTAGGGGAGGGAGGAGCTGCATTGTCGGGGTAGTTGGAGGAAGATGCCGTTGGCGGTGGGGACCGTGGGCCCCATGGCAACGTTGTTGTCAGTGTGGAGCTCCGCGCAGGAGGACACCAGCGGTGGCACGAGGTGGAGGGAGACATGGACATCCCGGCTGAAGGAGCACCGGAGAGGGAGGAGATGGTGGCTGCGGTGGCCATGTCCATTGTTGGTCACGCTTGCCGCTGCCATTGCCGAACTATCGCCTGTCTCTCACGCCATGGAAGAGAGGAGGAAGGAGAAAGGGAAAGAAGGGGAAAAGGGCAGGTCATTGTTGAGAAATTTTCGAGGAGTAATCTTCCAGAAATGGAGAAGCGCAAGTACCTGGTTCCATGTAACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTATGATTAGAAATTCCAATTATGTGTTTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAGAAAAGT                                                                               ]
[-] EMBL CB638722             [                                                                                   GGCAACGTTGTCGTCAGTGTGGAGCTCCGCGCAGGAGGACACCAGCGGTGGCACGAGGTGGAGGGAGACATGGACATCCCGGCTGAAGGAGCACCGGAGAGGGAGGAGATGGTGGCTGCGGTGGCCATGTCCATTGTTGGTCACGCTTGCCGCTGCCATTGCCGAACTATCGCCTGTCTCTCACGCCATGGAAGAGAGGAGGAAGGAGAAAGGGAAAGAAGGGGAAAAGGGCAGGTCATTGTTGAGAAATTTTCGAGGAGTAATCTTCCAGAAATGGAGAAGCGCAAGTACCTGGTTCCATGTAACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTATGATTAGAAATTACAATTATGTGTTTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAAAAAAGT                                                                               ]
[-] EMBL CF337464             [                                                                                                                                                                                                                                                                                        GGAGGAAGGAGAAAGGGAAAGAAGGGGAAAAGGGCAGGTCATTGTTGAGAAATTTTCGAGGAGTAATCTTCCAGAAATGGAGAAGCGCAAGTACCTGGTTCCATGTAACATGCCAGTTGGGCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTATGATTAGAAATTACAATTATGTGTTTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAATTTGTGAGGCAAATTAAGGAGAATATAGATCACTCATTTTCAAAAAAAA]
[+] EMBL CA999806             [                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGA                                                                                                                                                                                                                                  ]


>consensus_12719#2 GAGAGGGACTAGGGGAGGGAGGAGCTGCATTGTCGGGGTAGTTGGAGGAAGATGCCGTTG GCGGTGGGGACCGTGGGCCCCATGGCAACGTTGTTGTCAGTGTGGAGCTCCGCGCAGGAG GACACCAGCGGTGGCACGAGGTGGAGGGAGACATGGACATCCCGGCTGAAGGAGCACCGG AGAGGGAGGAGATGGTGGCTGCGGTGGCCATGTCCATTGTTGGTCACGCTTGCCGCTGCC ATTGCCGAACTATCGCCTGTCTCTCACGCCATGGAAGAGAGGAGGAAGGAGAAAGGGAAA GAAGGGGAAAAGGGCAGGTCATTGTTGAGAAATTTTCGAGGAGTAATCTTCCAGAAATGG AGAAGCGCAAGTACCTGGTTCCATGTAACATGCCAGTTGGGCAGTTTATTTTCATACTTC GTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACACTTTGC CCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCT TCCTCTACTTGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGAGAT CTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTATGATTAGAAAT TACAATTATGTGTTTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGG AGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAATTTGTGAGGCAAATTAAGGAGA ATATAGATCACTCATTTTCAAAAAAAA



consensusID : consensus_12719#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 644
fasta sequence
                              [CCACCGAATTGTTCAATCCAAAGCCAAACCAGCACGCAAGCAACCAGCGAACCCTAGCTACAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGATGAAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGGCCGCCATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGCTTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATACAGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCATTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTCTAGATGTTATTCAAATTCGTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGAGCTTTACCCGTACCGTACTGATGATGATTGCTCAAAAATCAGACATTGTATATGGTTCTCCTTTGTGTCAGCCAGTAGTTCTTGCCAACACAAGTGCACATTTG]

[+] EMBL CF318002             [CCACCGAATTGTTCAATCCAAAGCCAAACCAGCACGCAAGCAACCAGCGAACCCTAGCTACAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGATGAAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGACCGCCATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGCTTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATACAGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCATTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTCTAGATGTTATTCAAATTCGTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGAGCTTTACCCGTACCGTACTGATG                                                                                 ]
[+] EMBL CB638721             [                                       GCAACCAGCGAACCCTAGCTACAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGATGAAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGGCCGCCATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGCTTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATACAGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCATTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTCTAGATGTTATTCAAATTCGTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGAGCTTTACCCGTACCGTACTGATGATGATTGCTCAAAAATCAGACATTGTATATGGTTCTCCTTTGTGTCAGCCAGTAGTTCTTGCCAACACAAGTGCACATTTG]
[+] EMBL CB638720             [                                          ACCAGCGAACCCTAGCTACAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGATGAAGCCCAGGCCCTTCAA GAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGGCCGCCATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGCTTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATACAGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCATTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTCTAGATGTTATTCAAATTCCTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGAGCTTTACCCGTACCGTACTGATGATGATTGCTCAAAAATCAGACATTGTATATGGTTCTCCTTTGTGTCAGCCAGTAGTTCTTGCCAACACAAGTGCAC     ]
[+] EMBL CB639070             [                                          ACCACCGAACCCTAGCTACAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGATGAAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGATTTTGTCGCCATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTTTTCTCCTATGCTTTGATGCTTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATACAGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCATTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTCTAGATGTTATTCAAATTCGTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGAGCTTTACCCGTACCGTACTGATGATGATTGCTCAAAAATCAGACATTGTATATGGTTCTCCTTTGTGTCAGCCAGTAGTTCTTGCCAACA              ]


>consensus_12719#3 CCACCGAATTGTTCAATCCAAAGCCAAACCAGCACGCAAGCAACCAGCGAACCCTAGCTA CAGAGAGATTCGCATCAAGGAAGAAGACGAGAGAGGCTCATTTGAATTAGAGATAGAGAT GAAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGGCCGC CATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGC TTCATCACTGCTATCAATTTTCACTGCAAATTCCTCCTGCTTGCTGCTACCCCAACATAC AGAAAAACACACACACAACACCCGATTATTCCCTTCACCCGTGCCAGCCGACTGCTATGG CGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACTTCTATAAACATATCA TTGGAGTATGAGACTCATCATTGTGTCACAATAGTGCATCATATAATCATGTGATTGTTC TAGATGTTATTCAAATTCGTTCAAGTTTCTCCTGAGCGGCACAAGAAACTCAGGATAGGA GCTTTACCCGTACCGTACTGATGATGATTGCTCAAAAATCAGACATTGTATATGGTTCTC CTTTGTGTCAGCCAGTAGTTCTTGCCAACACAAGTGCACATTTG



consensusID : consensus_12719#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [GAGGAGTTCACCTTGGAGGAGAGGGCCAAGGGAGTCGGCCCCATGATCGCCTCCTACCCCGACAGGATCCCTGTCATTGTTGAGAAATTTTCGAGTAGTAATCGTTCCAGAAATGGAGAAGCGCATAGTACCTGGTTCCATGTAACATGCCAGTTGGCCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACANCTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTGATGATTAGAAATTACAATTATGTGTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAAAAAAAAA]

[+] EMBL BQ907070             [GAGGAGTTCACCTTGGAGGAGAGGGCCAAGGGAGTCGGCCCCATGATCGCCTCCTACCCCGACAGGATCCCTGTCATTGTTGAGAAATTTTCGAGTAGTAATCGTTCCAGAAATGGAGAAGCGCATAGTACCTGGTTCCATGTAACATGCCAGTTGGCCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACANCTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTCCTCTACTTGGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGGAGATCTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTGATGATTAGAAATTACAATTATGTGTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAAAAAAAAA]


>consensus_12719#4 GAGGAGTTCACCTTGGAGGAGAGGGCCAAGGGAGTCGGCCCCATGATCGCCTCCTACCCC GACAGGATCCCTGTCATTGTTGAGAAATTTTCGAGTAGTAATCGTTCCAGAAATGGAGAA GCGCATAGTACCTGGTTCCATGTAACATGCCAGTTGGCCAGTTTATTTTCATACTTCGTT CCAGGCTACATTTGTCTCCAGGGACAGCGTTGTTTGTGTTTGTCAACAACANCTTTGCCC CAGACTGCTCAGCTGATGGGCAGTGTGTATGAGTCATACAAAGATGAGGGCGATGGCTTC CTCTACTTGGTGCTACAGCAGCGAGAAGACATTCGGTTGACCAACTCCTCCGTGGGAGAT CTGCTTTTACCTCGGGCGTCAATAATATATGCATGTATATATATTACTGATGATTAGAAA TTACAATTATGTGTTATATACTGTATATTGATTGATGTGAATGAAGTGTTACAAGGAGGA GAAAAGTTTCATACCGAACTTAATTATCCCACCTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TAGAGATAGAGATGAAGCCCAAGCCCTTCAAGGAGGAGTTCACCCTGGAGGAGAGGGCCA 60
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AGGAGTCGGCCTCCATGATCGCCTCCTACCCCGCCAGGATCCCCGTATGTGATGTGATGT 120
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      GATGTCCACAATTGTTTCTCTCTCACTACTTGTTTCTCCTACCAGTTTCCCCTTCCTTCA 180
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AGTTCCTCATGCTGCTACAGTACCACCTATACATAACTCAGCCGCCATGCCATCAAATTT 240
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TGCAAACTCACATTCTTCGCACGCACTCCAATCAACATTATATCATCACTGTGCCACAAT 300
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AACCTCGCTCCTATATTTTTTTTGGAATTAATCACGGGGGGGGGGAGATTCCCCACCTAA 360
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      ATTATATTGGAAAAAAGGAAGAGGGGGTACAACCGGAAGCATTACAGCATTAGTCGGAGC 420
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      GAATAGAAGAAGAAAGAAGACTTTTCCAGTTAGTCACAACCGGCCTATCTTCTCTACTGA 480
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      GGTGCTCAGCCCACAAAGTAGCGTCCTCAATACATTTAGCCACTAACCTTGTCCGGGAGT 540
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TAGGAAGCCCCCGGAAAACAACGTCGTGTCTATGGATCCAAAGTCCCCAGAAACAAAGTA 600
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ------------------------------------------------------------
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AGAAAAAAACTTGGAAGTGCTTGACAGGCAAGTGGCAGGGAGCAGCGAGGTCAGCAAGAT 660
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      -------------------------------------------AACGAGGTCAGCAAGAT 17
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      CTTGAACATTCGAAACCACAGATATACGCAAGGCTCTCCAGAATTCCTGGGCGAATTGAC 720
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      CTTGAACATTCGAAACAACAGATGTACGCAAGGCTCTCCAGAATTCCTGAGCGAATTGGC 77
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      ATTGGAGAAAGAGATGAGTCACAGTTTCGTCAGCACAGTTGCAGACGATGCACCTCGCTC 780
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ATTGGAGAAAGAGATGAGTTGCAGTTTCGTCAGCACAGTTGCAGACGATGCACCCGGCTG 137
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      CTATATATGTCGTCATGTGACTGAAGATGTTATTCAAATCCCTTCATGTTTCTCTTGAGC 840
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      TTGGAACAATGTTCTTCTTGTGCAGATTAGCCTTGGTAGGGAGCCGATCCTTAGCTAGA- 196
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TGTCCAACAACTCTAGCGAAACTTTACTGAAAAGAAAATCAAATAGATGCTGCATACATG 900
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      -AGCCAGGCGAAGAATTGTACTCTCGGCGGAGCTCGATTGTCCCAGATGAAGCGCCAGTT 255
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TTCTGTTCTGTTGATTCTCCGCTGTGTTGGTTAGTTATTTCCAACACAAGTACCCATTTG 960
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      CTTGCACAGAGGTAGGCCCATATGAGTAGAAGAATAGAT-----AAACTTTGTGCGAAGG 310
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      CGTGCGGCAGTTTCTTGTCAATGGTTTGGGTCAACATTTTCAAGCACTTAATGAGAGGAT 1020
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ATCCCGGGAGCATCACGCGACGGACATAGATCAGTAGAGTTACTGAGGTAGAAGTTTTGT 370
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AGAGGTGCTGACTGAATTACCTATTCCATTTTTATTCATCTAGCAAGTAGACTGTGATCA 1080
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      AGCATCTCTCTCAATCTCGCTAATTGAGTTTCAG--CAGTGGATGACAGCCTGGGGGCGA 428
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      CATCATTTTCCATTATCTTAACATTGTGCAAAAAGAAATTAGTTGGGCTCTGTTATTCGC 1140
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      ACTGATCTTCAATTGGCTTCGAGAGGAACACCGCAACTGTTGCTTCCCTGTTGAGAGCAT 488
                                                                                   

consensus_12719#2      ------------------------------------------------------------
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AAGTTATTGG-----CCATTGTATTTCCTACCCTGTTTAAATGTTGCAGA---TTGAATC 1192
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      GAGAGAACAGGGGAGCAAATCGATCTTTGAAAGTACTCGAACCATACCAACAGTCATGCC 548
                                                                                   

consensus_12719#2      ----GAGAGGGACTAGGGGAGGGAGGAGCTGCATTGTCGGGGTAGTTGGAGGAAGATGCC 56
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      AGGGCTCAGGGTCAATCAGGGCTCAGGGTCAAACTCATGGAGCATTCTTGGGGGTATTCC 1252
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      AGAACGAAGTGCGTGTGCCATCCCCAACTTGAACGCGCGTTAGGCGCTGGAGAATGAAGA 608
                                                                                   

consensus_12719#2      --GTTGGCGGTGGGGACCGTGGGCCCCATGGCAACGTTGTTGTCAGTGTGGAGCTCCGC- 113
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      TAGTCCTAGATAGAAATAGTTCAATTTGCACTACCTACCCTTTTGTCTCTGCACGTTAG- 1311
consensus_12719#3      ----------------------------------------------------CCACCGA- 7
consensus_12719#1      TGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCATGCATGTTTTTAATCCCTAGA 668
                                                                                   

consensus_12719#2      -GCAGGAGGACACCAGCGGTG-GCACGAGGTGGAGGGAGACATGGACATCCCGGCTGAAG 171
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      -CTTCAGTTAACTCTGTTGTG-A-ATCAGTTTTGCAAGTACTGGATCCTGAAAACTAAAC 1368
consensus_12719#3      -ATT--GTTCAATCCAAAGCC-AAACCAGCACGCAAGCAACCAGCGAACCCTAGCTACAG 63
consensus_12719#1      CCTCCCACTTCTCTGGCAGTGCACACTTTATCCCAAGCAACAAGGCAGCTAGAGCCACTA 728
                                                                                   

consensus_12719#2      GAGCACCGGAGAGGGAGGAGATGGTGGCTGCGGTGGCCATGTCCATTGTTGGTCACGCTT 231
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      CAAAACCAGAATTCGTACCTAAACCATCTGTGTCGTTGAATTCCACAG--GAACACATCA 1426
consensus_12719#3      AGAGATTCGCATCAAGGAAGAAGACGA--GAGAGGCTCATTTGAATTAGAGATAGAGATG 121
consensus_12719#1      CAAGAATCATCTCCAGACCAAAGGAAAGCCCTCCGTTTTTTATCAAAAGCTTCAATTGTT 788
                                                                                   

consensus_12719#2      GCCGCTGCCATTGCCGAACTATCGCCTGTCTCTCACGCCATGG--AAGAGAGGAGGAAGG 289
consensus_12719#4      ------------------GAGGAGTTCACCTTGGAGGAGAGGGCCAAGGGAGTCGGCCCC 42
consensus_12719#0      AAACTGATTACTTTTCATTTGTGCATTTTCTTCTGAAGTGTGT-----TTCTTGAACATT 1481
consensus_12719#3      AAGCCCAGGCCCTTCAAGGAGGAGTTCACCTTGGAGGAGAGGGCCAAGGAGTCGGCCGCC 181
consensus_12719#1      CCTTTGGGAAGCAGAAGCGCCGACATTGCATAGACCGGGAGGCTATCAAGAACCGCGTTG 848
                                                     *          *                  

consensus_12719#2      AGAAAGGGAAAGAAGGGGAAAAGGG--CAGGT----CATTGTTGAGAAATTTTCGAGGAG 343
consensus_12719#4      ATGATCGCCTCCTACCCCGACAGGATCCCTGT----CATTGTTGAGAAATTTTCGAGTAG 98
consensus_12719#0      ATGCTAAGATTCTAGTATCTATGATTGCAGGT----CATTGTTGAGAGGTTTTCAAGAAG 1537
consensus_12719#3      ATGATCGCCTCCTACCCCGACAGGATCCCTGTACTATTTCTTCTCCTATGCTTTGATGCT 241
consensus_12719#1      ATAAGCACAATTCTCTCTGAATAGTTGAGGAGTTTGGCTTGCCAAGAGGAGAGGTAGAAA 908
                       *                                     *                *    

consensus_12719#2      TAATC-TT-CCAGAAATGGAGAAGCGCA-AGTACCTGGTTCCATGTAACATGCCAGTTGG 400
consensus_12719#4      TAATCGTT-CCAGAAATGGAGAAGCGCATAGTACCTGGTTCCATGTAACATGCCAGTTGG 157
consensus_12719#0      TAGTC-TT-CCAGAAATGGAGAAGCGCA-AGTACCTAGTTCCATGTGACATGCCAGTTGG 1594
consensus_12719#3      TCATCACT-GCTATCAATTTTCACTGCA-AATTCCTCCTGCTTGCTGCTACCCCAACATA 299
consensus_12719#1      TCAGCTTTAGCTATCATGGGCCGGAGTCCAGAGATCAGCAATGTGGAGTTTGCTATGAGA 968
                       *   *  *  *    *         *   *                      * *     

consensus_12719#2      GCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGC--GTTGTTT 458
consensus_12719#4      CCAGTTTATTTTCATACTTCGTTCCAGGCTACATTTGTCTCCAGGGACAGC--GTTGTTT 215
consensus_12719#0      GCAGTTTATTTTCATACTTCGTTCAAGGTTACATCTGTCTCCAGGAATAGC--ACTGTTT 1652
consensus_12719#3      CAGAAAAACACACACACAACACCC--GATTATTCCCTTCACCCGTGCCAGCCGACTGCT- 356
consensus_12719#1      GAGAGGTAGTCCGAGGTAGGAG---AGGGGATAGGGAGTCCCAGTGGGGAC--CCAATTG 1023
                              *     *            *   *         ** *      *       * 

consensus_12719#2      GTGTTTGTCAACAACAC-TTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAG-- 515
consensus_12719#4      GTGTTTGTCAACAACANCTTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTATGAG-- 273
consensus_12719#0      GTGTTTGTCAACAACAC-GTTGCCCCAGACTGCTCAGCTGATGGGCAGTGTGTACGAG-- 1709
consensus_12719#3      ATGGCGGCATGTGATTCTTTTGTTGTATGTTTTCTTCTTCACATGCACT-TCTATAAA-- 413
consensus_12719#1      ATTGTCACAAAAGAGAGCAGAGCCAGAATGTTCTTGCCAGATCCGCCGTCCCCAAGAGGA 1083
                        *           *       *    *   *         *   **  *    *  *   

consensus_12719#2      --TCATACAAAGATGAGGGCGATGGCTTCCTCTA--CTTG-TGCTACAGCAGCGAGAAGA 570
consensus_12719#4      --TCATACAAAGATGAGGGCGATGGCTTCCTCTA--CTTGGTGCTACAGCAGCGAGAAGA 329
consensus_12719#0      --TCATACAAAGATGAGGACGATGGCTTCCTCTA--CATG-TGCTACAGCAGCGAGAAGA 1764
consensus_12719#3      ---CATATCATTG-GAGTATGAGACTCATCATTG--TGTCACAATAGTGCATCATATAAT 467
consensus_12719#1      GTCTGTCGAATGAAGATGATGAAGTCTTTTTACAAGCAAGGCACAGTTTTGATCCGGATA 1143
                            *   *    **    **                                   *  

consensus_12719#2      CATTCGGTTGACCAACTCCTCCG--TGG-AGATCTGCTTT----TACCTCGGGCGT---- 619
consensus_12719#4      CATTCGGTTGACCAACTCCTCCG--TGGGAGATCTGCTTT----TACCTCGGGCGT---- 379
consensus_12719#0      CATTCGGCTGACCAACTCATCCG--TGG-AGATCTGCTTTCTTTTCTTTCATGTGTATGT 1821
consensus_12719#3      CATGTGATTGTTCTAGATGTTAT--TCA--AATTCGTTCAAGTTTCTCCTGAGCGGCACA 523
consensus_12719#1      TATAGGATGTTTAATTTCGCCCGAATGTCGGATGAGTTTCTGTAGCACATCAGCGACAAG 1203
                        **  *                   *     **  * *              * *     

consensus_12719#2      ------------CAATAA---TATATG----CAT-GTATATAT--------ATTACT--A 649
consensus_12719#4      ------------CAATAA---TATATG----CAT-GTATATAT--------ATTACTG-A 410
consensus_12719#0      GTTGCTCGAACATAAAGA---TGCATG----CAT-GTGCATAT--------ATTAGT--A 1863
consensus_12719#3      AGAAACTCAGGATAGGAGCTTTACCCG----TACCGTACTGATGAT----GATTGCTCAA 575
consensus_12719#1      GATGAACAGATATGGCGACATTGGGTCACCCTGTCGAACTCCTCTTTTGCAGTTGATCCA 1263
                                            *             *      *         **  *  *

consensus_12719#2      TGATTAGAAATTACAATTATGTGT--TTTATATACTGTATATTGATTGATGTGAA-TGAA 706
consensus_12719#4      TGATTAGAAATTACAATTATGTGT--T--ATATACTGTATATTGATTGATGTGAA-TGAA 465
consensus_12719#0      TCATTAGAAAATGCA-TGAAGTGT--T----ATACTGTACACTGATTAATGTGAAATGAA 1916
consensus_12719#3      AAATCAGACATTGTATATGGTTCT--CCTTTGTGTCAGCCAGTAGTTCTTGCCAACACAA 633
consensus_12719#1      GTTCCCAGGAACGCCATTGATCATAATTGCTGACTTAGAAGTTTGTAGCAGTCTATTCGT 1323
                                *             *                  *  *    *   *     

consensus_12719#2      GTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAATTTGTGAG 766
consensus_12719#4      GTGTTACAAGGAGGAGAAAAGTTTCATACCGAACTTAATTATCCCACCTAAAAAAAAAA- 524
consensus_12719#0      ATAC-AC----------------------------------------------------- 1922
consensus_12719#3      GTGC-ACATTTG------------------------------------------------ 644
consensus_12719#1      CCAAGATCTCCAGAGGAGTGGGAATCCGCGAGCTTGAAGGATTCTGTCCAAGCTATCCCA 1383
                            *                                                      

consensus_12719#2      GCAAATTAAGGAGAATATAGATCACTCATTTTCAAAAAAAA------------------- 807
consensus_12719#4      ------------------------------------------------------------
consensus_12719#0      ------------------------------------------------------------
consensus_12719#3      ------------------------------------------------------------
consensus_12719#1      TGCAACTGAATCAAAAGCTTTCGTGAAATCCTACTTTATGACTGCAGCTGCGCATTTTCG 1443
                                                                                   

consensus_12719#2      ---------------------------
consensus_12719#4      ---------------------------
consensus_12719#0      ---------------------------
consensus_12719#3      ---------------------------
consensus_12719#1      TTTGAAACAACATTGCAGAAGCTCACT 1470
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)