These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12723#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2006 fasta sequence [CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTA-GGTACCATGAATGCCGTAT-GGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACACACCCACCAAAAAAAAAAAAGGAAAAAAA] [+] EMBL CB684806 [CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGGCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTGCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCATCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCCATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCC ] [+] EMBL AK065062 [ CGCGTCGCCGTCGCCTCTCCTCCGATCGATCCCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGACTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAGGCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAACTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATGCCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTA GGTACCATGAATGCCGTAT GGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTTTAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTCTTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTA ] [+] EMBL CB685203 [ TCGACCTCCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGGAGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCTCCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCGCGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCATCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCTCCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCCTGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCATGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGTGCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCTCAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAACAAATTATGCGCTGGGTACCCT ] [+] EMBL OSS1632A [ ATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCG AGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGNATGTAGATCTTCAGCACTAACACTATTTCAGGAAGGAGGA AGGGATTTAGGGTACCATG ATTCCG ATGGGGAGCAGCATTTNTACCA ACCTT ATGGGAATTTTTTgg ] [+] EMBL OSS1254A [ ATGTTGCGTACGAATCACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTCAAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTAAACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTGGTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAATGTAGGGTACCATGAATGCCGTAT GGGAGCAGCATTTGTACC ] [-] EMBL CB684807 [ GGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAAAGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTCGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACACACCCACCAAAAAAAAAAAAGGA ] [-] EMBL CA762565 [ CAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATATTGTTGCTNTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGATGATTGATGTTGCGAATCAAATNGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGNGTCGTCGCTGGGATTTGGTGGAGTTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTCTCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTGCCTTGCTGAATGAATCTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTCTCCGTAAAATGTACCCAATGATTTCTCGAGCTGACTTGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACCCAACCCCCAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12723#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 785 fasta sequence [TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCACCCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGAGGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCTCCGTGGCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCCTCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCGGTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCGCGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCTGTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTTCGCTCATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAGGCAAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGGGTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGGCGGGCGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGCAGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATTAATCCGGCGCTAATTGCAGTCGCGGTGT] [+] EMBL AK106729 [TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCACCCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGAGGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCTCCGTGGCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCCTCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCGGTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCGCGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCTGTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTTCGCTCATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAGGCAAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGGGTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGGCGGGCGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGCAGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATTAATCCGGCGCTAATTGCAGTCGCGGTGT] consensusID : consensus_12723#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence [CTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTCCACTCCTATTCATTTCCGCTGTTGTTCTATTTACAGCATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGT] [-] EMBL CB685204 [CTCAGCATATATTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTGCGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGGCGTCAAACCAGACAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTCCACTCCTATTCATTTCCGCTGTTGTTCTATTTACAGCATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTATACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGT] consensusID : consensus_12723#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence [CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGAGGAGGAGGAGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGCACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAGCCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTTCTTCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCCCCACNNTGGGCGTGCCCAACAAGACCATGTTGCACCAGCAACAACCACTGCAGGCCCTC] [+] EMBL CB965719 [CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGAGGAGGAGGAGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGCACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAGCCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTTCTTCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCCCCACNNTGGGCGTGCCCAACAAGACCATGTTGCACCAGCAACAACCACTGCAGGCCCTC] consensusID : consensus_12723#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence [GCCATATATATGGTTNTGACGTTGCCTTGCTGAATGAATNTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTNTCCGTAAAATGTACCCAATGATTTNTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACNCAACCNCCAAAANAGAGAGTTTTGAAATTTTGTTCNAAAAAAAAAAAAAA] [+] EMBL AU174213 [GCCATATATATGGTTNTGACGTTGCCTTGCTGAATGAATNTTGACTGTAAAAGCAGCCCTTTGTAGTTAATACAACGATGTGGGTTGCTTTTGCTGCAACGGTCGTGTTTCCAGAATGCTCAATGATGTACTGGTCTCAAAATATTGCTGATGACCTGATGTATAGCAGCAATTTTGTNTCCGTAAAATGTACCCAATGATTTNTCGAGCTGACTAGCTAAAATTTGTAAATGTACATCCAGAGAACAAATTATCAATATCAGGTACNCAACCNCCAAAANAGAGAGTTTTGAAATTTTGTTCNAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CACCACCTCCACCACCCCTCGCCGCCGACGCGTCGCCGTCGCCTCTCCTCCGATCGATCC 60 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CCCCCCCTCGCATGCGCCGCCCCAATGCCCGCGCCCATCACCCGCGTGGCGAATCGCAGG 120 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 AGGCGGCGGCGACAACCCTAGCTCCTCCTCCTCGTCCGACCATTTCCTCCGCGATGGGCT 180 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CCCGCCGCGCCCGCGGCCGCCGCCTCCTCGCCGCCCTCCTCGCCGCCGCGTTCGCCGTCG 240 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CGCTCCTCCTGCTGGTGCCCCGCTCGCCGCGTCGTCGTCCCCACGAGTACGGCGTCGTCA 300 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TCGACGCCGGTAGCACGGGGAGCCGCGTCCACGTCATCGCCTACCGCTCCTCCTCCTCCT 360 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CCCCCGCCTCCGCGCTCCCGCGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCC 420 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CGGGGCTGTCGTCCTTCGCCTCCGACCCGGGCGGCGCGGGCCGGTCGCTGGCGCCGCTCC 480 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TGGAGTTCGCGCGCCGCCGCGTGCCGCCGGAGAGCTGGGCGGAGACCGACGTGCGCCTCA 540 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TGGCCACCGCGGGGCTCCGGCTGCTCGACGCCGCGGTGGCCGAGGCTGTGTTGGATTCGT 600 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 GCAGGGTGTTGCTGCGGGGATCGGGGTTCCAGTTCCAGGACGATTGGGCCACCGTGATCT 660 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CAGGAGCTGAGGAAGGGATGTATGCATGGATTGCAGCAAATTATGCGCTGGGTACCCTAG 720 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 GCGATGACTCACAAGATACTACGGGGATAATTGAGCTTGGTGGAGCTTCCGTTCAGGTAA 780 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CTTTTGTTACGGACAAACCTTTGCCTCCAGAGTTCTCTCATACTCTGAAGTTCGGTGATG 840 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CCACATATAATCTGTACAGTCACAGCTTTCTACAACTTGGTCAGAATGTTGCGTACGAAT 900 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 CACTCCATGACATGCTGAGCACACCTGGGCATAAATCAATGGCAACACATTTAATTTCTC 960 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 AAGCTAAGTACAGAGATCCTTGCACTCCAAGGGGATTTTCGCCCATGGAGGGAGCAGTTA 1020 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 AACTTCCTGCCAGTGTTCTTGAGTCGAAGGTTGAGTACAGACCTTATGCTCATGCTGTTG 1080 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 GTAACTTCTCCGAATGTAGATCTGCAGCACTAACACTATTGCAGAAAGGAAGAGAGGAAT 1140 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 GTAGGTACCATGAATGCCGTATGGGAGCAGCATTTGTACCAGACCTTGATGGGAAATTTT 1200 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TAGCAACAGAGAATTTCTACCATACTTCCAAGTTCTTTAGGTTGCGTTCTAAGTCTTTTC 1260 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TTTCTGACCTGATGCTGGCTGGGGAGAAATTTTGCCGAGGAGACTGGTCAAAGATTAAAA 1320 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 AGGAGTACCGTTCTTTCAATGAGGGGGAGCTGCTTCTTTTTTGCTTTTCCTCAGCATATA 1380 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 ------------------------------------------------------------ consensus_12723#0 TTGTTGCTTTGCTGCATGATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTTG 1440 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 -----------------TCACTCACATTCAGATGATGCGGCTGCGACGAGGGCACATCAC 43 consensus_12723#0 CGAATCAAATTGGCGGTGTGCCTGTTGACTGGGCATTGGGTGCTTTCATTGTGCAGAAGG 1500 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 CCAGCTTCTGCTGCTGATACTTGCTCCCGTTCGCCTCCTGCAGGAGATCACCATTGAAGA 103 consensus_12723#0 CGTCAAACCAGACAGACATGCTCCATCCTGAGGGGGAGAAGATCTCGCCTGAAGACGGTA 1560 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------CGGAGGGAGCCTATCATGGAGGAAATGGTCTGAGGA 36 consensus_12723#1 GGCTGCGACAACCCTAGCTCCTCCTCCTCCTCAGACCATTTCCTCCATGATAGGCTCCCT 163 consensus_12723#0 TACGACATGGAGAAAGGCCGGTACATCATAACCAGGGTGAGACGATGAGCCTTGCGCGTC 1620 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 GGAGGAGG-AGCTAGGGTTGTCGCAGCCTCTTCAATGGTGATCTCCNTGCCAGGAGGCGC 95 consensus_12723#1 CCGTG-GCCGCGGCCGCCGCCTCCTCGCCGCCGCGTCCGCCCTCGCGCTCCTCCTCCTCC 222 consensus_12723#0 GTCGC-TGGGATTTGGTGGAGCTCCTGCGGTGGGGTGCCAGTGATCGTGTTTGTAAATTC 1679 consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ACGGGCAGCCCAGTCATCCAGCAGCCAGCACAGCTGTGGTGCATGTGCCCTCGTCGCCAG 155 consensus_12723#1 TCCTCCTGTCCCGCTCGCCGCGTCGTCGTCCCCACGGGTATGGCGTCGTCATCGACGCCG 282 consensus_12723#0 TCGTAGTATATACACGATATCTGCTAGGCAGCCATATATATGGTTCTGACGTTG---CCT 1736 consensus_12723#4 ------------------------------GCCATATATATGGTTNTGACGTTG---CCT 27 consensus_12723#2 -----------------------------CTCAGCATATATTGTTGCTTTGCTG---CAT 28 consensus_12723#3 CCGCCATCATCTGCAATCAGCCTGGGCTTCAGCTGGGGCANTNGGTGGTGGTTT----CT 211 * consensus_12723#1 GTAGCACGAGGAGCCGCGTCCACGTCATCGCCTACCGCTCCCCCGCCGCCTCCGCGGCCG 342 consensus_12723#0 --TGCTGAATGAATCTTGACTGT--AAAAGCAGCCCTTTGTA--GTTAATACAACGATGT 1790 consensus_12723#4 --TGCTGAATGAATNTTGACTGT--AAAAGCAGCCCTTTGTA--GTTAATACAACGATGT 81 consensus_12723#2 GATACTCTAAAGGTCCCGCTGGATGATAAGAGGATTGATGTT--GCGAATCAAATTGGCG 86 consensus_12723#3 TCGGCCCATGCAGGCAAGCACATTGTTAGGCTNGCAACTTCTTCAACATGTCC-CCACNN 270 * * * * consensus_12723#1 CGGCCGCGCTCCCGTGGATCGACTGGGCGCGCACGGCGTCGATGAAGGCGGCCCCGGGCT 402 consensus_12723#0 GGGTTGCTTTTGCTGCAAC--GGTCG-TGTTTCCAGAAT-GCTCAATGATGTACTGGTCT 1846 consensus_12723#4 GGGTTGCTTTTGCTGCAAC--GGTCG-TGTTTCCAGAAT-GCTCAATGATGTACTGGTCT 137 consensus_12723#2 GTGTGCCTGTTGACTGGGC--ATTGGGTGCTTTCATTGT-GCAGAAGGCGTCAAACCAGA 143 consensus_12723#3 TGGGCGTGCCCAACAAGAC---CATGTTGCAC-CAGCAACAACCACTGCAGGCCCTC--- 323 * * * * * * consensus_12723#1 GTTGTCCTTCGCCTCCGATCCGGGCAGCGTGGGTCGGTCGCTGGCGCTGCTCGTGGAGTT 462 consensus_12723#0 CAAAATATTGCTGATGACCTGATGTATA-----GCAGCAATT--TTGTCTCCGTAAAATG 1899 consensus_12723#4 CAAAATATTGCTGATGACCTGATGTATA-----GCAGCAATT--TTGTNTCCGTAAAATG 190 consensus_12723#2 CAGAGTACTCAGATTCATCAGTTCCATATCTAAACAGCTATTACTATTCTGGGTTGGTTC 203 consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 CGCTC---ATGGTCGGCGGCGGCGAGGCCCGGCATGGTCGGGTGAG-GCAAGGTGGGAAG 518 consensus_12723#0 TACCC--AATGATTTCTCGAGCTGA--CTAGCTAAAATTTG-TAAATGTACATCCAGAGA 1954 consensus_12723#4 TACCC--AATGATTTNTCGAGCTGA--CTAGCTAAAATTTG-TAAATGTACATCCAGAGA 245 consensus_12723#2 CACTCCTATTCATTTCCGCTGTTGTT-CTATTTACAGCATGCTCCATCCTGAGGGGGAGA 262 consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 TCACGCGGGCGGCGGGTGAGGCTCATGGTCGGCGGCGGCGGCGAGGGCCGGCATGGTCGG 578 consensus_12723#0 ACAAATTATCAATA--TCAGGTACACACCCACCAA-AAAAAAAAAAGGAAAAAAA----- 2006 consensus_12723#4 ACAAATTATCAATA--TCAGGTACNCAACCNCCAA-AANAGAGAGTTTTGAAATTTT-GT 301 consensus_12723#2 AGATCTCGCCTGAA--GACGGTATACGACATGGAG-AAAGGCCGGT----ACATCAT-AA 314 consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 GTGAGGCGAGGTGGGAAGTCACGCGGGCGGCGGGTGAGGCGGGCGGCGTGGCTGGTGTGG 638 consensus_12723#0 ------------------------------------------------------------ consensus_12723#4 TCNAAAAAAAAAAAAAA------------------------------------------- 318 consensus_12723#2 CCAGGGTGAGACGATGAGCCTTGCGCGTAGTCGCTGGGATT--TGGTGGAGCTCCTGCGG 372 consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 CGGG-CGGCGGAGATAATCCTCTTTGGCGTGCGTTCTTTTTTTCGTTCTTTTTGGCGTGC 697 consensus_12723#0 ------------------------------------------------------------ consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 TGGGGTGCCAGTGATCGT------------------------------------------ 390 consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 AGTTTCTTTTTCCGGAGCGAGACGCAGTGTTAATCCGGTGCTAATTGCAACCGCAGGATT 757 consensus_12723#0 ------------------------------------------------------------ consensus_12723#4 ------------------------------------------------------------ consensus_12723#2 ------------------------------------------------------------ consensus_12723#3 ------------------------------------------------------------ consensus_12723#1 AATCCGGCGCTAATTGCAGTCGCGGTGT 785 consensus_12723#0 ---------------------------- consensus_12723#4 ---------------------------- consensus_12723#2 ---------------------------- consensus_12723#3 ---------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||