cluster # 12730

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Oryza sativa
cluster # 12730 cluster # 12730 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12730#0 length = 1845 sequences # 10

consensus_12730#1 length = 799 sequences # 1

consensusID : consensus_12730#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1845
fasta sequence

                              [TCTCCTTCAAAGCAGGAGAAAAGAAGAAAAATTGATTGCTCTCTCGTTCCGTTCCGGAGGAGAGAGAGAGAGAGAGAGAGAGGAGAGCGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGTCGAGCAGGTTCTCGCCGGCGCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGCAGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAAAGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACTG-TTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGC-TTGAGAAGCAAAGCTT-GGGTGACTTCATTACTCGCATCAACTC-TGACAAAGCTGTCATAGTATCGGTCT-CTCCACAGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAACTCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTACGACACAAGTTCCAGTCGAGATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTATCTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGGATATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAGAGCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGAAGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCTGTTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTATTAACCACTGGTGAAGTGTTAGATTTGATACAGTCCAGATCTGTTGATTTCAAGACCCTAGAGGAGTCTCCCATGGACAGATTATTAACCAATGTTGATGATGACGGTCAACTATATGGGGTTTCTGGTGGCTCAGGGGGTTATGCAGAAACAGTCTTTCGACATGCGGCACATGTTCTCTTCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTGAGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGATAATTCCATTGCAATTTTTCAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK067853             [TCTCCTTCAAAGCAGGAGAAAAGAAGAAAAATTGATTGCTCTCTCGTTCCGTTCCGGAGGAGAGAGAGAGAGAGAGAGAGAGGAGAGCGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGTCGAGCAGGTTCTCGCCGGCGCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGCAGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAAAGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACTG TTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGC TTGAGAAGCAAAGCTT GGGTGACTTCATTACTCGCATCAACTC TGACAAAGCTGTCATAGTATCGGTCT CTCCACAGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAACTCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTACGACACAAGTTCCAGTCGAGATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTATCTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGGATATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAGAGCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGAAGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCTGTTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTATTAACCACTGGTGAAGTGTTAGATTTGATACAGTCCAGATCTGTTGATTTCAAGACCCTAGAGGAGTCTCCCATGGACAGATTATTAACCAATGTTGATGATGACGGTCAACTATATGGGGTTTCTGGTGGCTCAGGGGGTTATGCAGAAACAGTCTTTCGACATGCGGCACATGTTCTCTTCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTGAGGTTACGCTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATC                                                                   ]
[+] EMBL OSR3084A             [                                                                            AGAGAGGAGAGTGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGTCGAGCAGGTTCTCGCCGGCNCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGCAGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAAAGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACTGTTTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGCTTTGAGAAGCAAAGCTTNGGGTGACTTCATTACTCGCATCAACTCTTGACAAAGCTGTCATAGTATCGGTCTNTTCCACAGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB643425             [                                                                              AGAGGAGAGCGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGTCGAGCAGGTTCTCGCCGGCGCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGCAGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAAAGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACTG TTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGC TTGAGAAGCAAAGCTT GGGTGACTTCATTACTCGCATCAACTC TGACAAAGCTGTCATAGTATCGGTCT CTCCACAGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAACTCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTACGACACAAGTTCCAGTCGAGATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTATCTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGGATATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAGAGCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGAAGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCTGTTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTATTAACCACTGGTGAAGTGTTAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF306718             [                                                                                                                                                                                                                                           ACAAAAGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACTG TTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGC TTGAGAAGCAAAGCTT GGGTGACTTCATTACTCGCATCAACTC TGACAAAGCTGTCATAGTATCGGTCT CTCCACAGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAACTCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTACGACACAAGTTCCAGTCGAGATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTATCTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGGATATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAGAGCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGAAG CACATGATGTTTATCATGTTACTGTGATGCCCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB663665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGAAGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCTGTTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTATTAACCACTGGTGAAGTGTTAGATTTGATACAGTCCAGATCTGTTGATTTCAAGACCCTAGAGGAGTCTCCCATGGACAGATTATTAACCAATGTTGATGATGACGGTCAACTATATGGGGTTTCTGGTGGCTCAGGGGGTTATGCAGAAACAGTCTTTCGACATGCGGCACATGTTCTCTTCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTGAGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACG                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB643426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGAAACAGTCTTTCGACATGCGGCACATGTTCTCTTCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTGAGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATTTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTTTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATTTACTCAGCTGATGATTCCATTGCAATTTTTCAAAAA     AAAAAAAAAAAAAAAA          ]
[-] EMBL CB663666             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAAACAGTCTTTCGACATGCGGCACATGTTCTCTTTGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTGAGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGATAATTCCATTG                                             ]
[+] EMBL CA764023             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGAT                                                       ]
[+] EMBL AU173436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGATAATTCCATTGCAATTTTTCAAAAA     AAA                       ]
[+] EMBL OS38029              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               nTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAGATTGTAACATGTAAAAACGAAGTAGACCAAATAGTAGTTGATCTACTCAGCTGATAATTCCATTGCAATTTTTCAAACAGGGCCAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12730#0
TCTCCTTCAAAGCAGGAGAAAAGAAGAAAAATTGATTGCTCTCTCGTTCCGTTCCGGAGG
AGAGAGAGAGAGAGAGAGAGAGGAGAGCGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGT
CGAGCAGGTTCTCGCCGGCGCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGC
AGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAA
AGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACT
GTTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGCTTGAGAAGCAAAGCT
TGGGTGACTTCATTACTCGCATCAACTCTGACAAAGCTGTCATAGTATCGGTCTCTCCAC
AGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAAC
TCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTACGACACAAGTTCCAGTCGAG
ATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTAT
CTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGGA
TATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAGA
GCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTGA
AGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCTG
TTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTAT
TAACCACTGGTGAAGTGTTAGATTTGATACAGTCCAGATCTGTTGATTTCAAGACCCTAG
AGGAGTCTCCCATGGACAGATTATTAACCAATGTTGATGATGACGGTCAACTATATGGGG
TTTCTGGTGGCTCAGGGGGTTATGCAGAAACAGTCTTTCGACATGCGGCACATGTTCTCT
TCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATTTTCGTG
AGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGATTCA
GAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTATTG
AAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCAAAG
GCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTATCGG
TATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGCAAC
CTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAAGCG
TGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGTGGG
CAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAGAAA
AGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTAGGT
TTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGATGAG
ATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGATAATTC
CATTGCAATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12730#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 799
fasta sequence

                              [TTTTTTTTTGAAAAATTGCAATGGAATTATCAGCTGAGTAGATCAACTACTATTTGGNTCANTTCGNNTTNACAAGTTACAATANCATNCANGTTTCCCCNGTGAGGNCGGNAGGTGTCAAAAGTTTACCNANGNAAAANCTTGGTNAAACCTNCAAANNTTNNCNAAATTTAANTATNCCCCGCNTNGAAACANCTNNNAANTGCNGGNGNAATNCCCGTNTCACNTGTCGTNNNTCCAAGGGTNTGGCTTTAGTNTTGGGCAAGGGGNANCCCNAGGTTGGGCCCCCAAGGAAACTTGNCCCNNAACNNGGGGNANAATTTTTNNCACNNCCNNTNNNTNTGNNNCNCNCCCTNTTTTNNNNNNNTTGNCGNNTNCNCCACGGGNNNNTTNCNACCCNTNTGTGNAANGTNNNGGCNGNNGGTTGCTTGGCNNCNNTTGNTCATNGGTTGTGNTTGTNNTNCTNCGAGTTNGCGCCCCNNGGNNTTNNANNNNNGTNNAGTTNTTTTACGNNCNGNNNGNGGTNNNCNGGGNGTGNCNNTNNNTNCNCGGNNCNNNTTTNNNGNNNTGNNNNNNNNNNNNGNATTTGTNNNNNGNGGGNNCNGCTGNNNNGTTCNNGNNNNCNCGAGTTNTTTCNTNTNTNNNNNTGTNNNNNGNACTGGNNNNNNGNTNGGGTNTNGTGTTTNGTGNTNNNATNGANTNNNTTCNCTTNGTNNNNCNNNGTNTNNNNTTGANANNNTNNANTTNNNCGTNNTTNGNNNNTNNNTNNGGTTNNTGNNCNGNNNGNANCCNTTTGNNN]

[+] EMBL D43373               [TTTTTTTTTGAAAAATTGCAATGGAATTATCAGCTGAGTAGATCAACTACTATTTGGNTCANTTCGNNTTNACAAGTTACAATANCATNCANGTTTCCCCNGTGAGGNCGGNAGGTGTCAAAAGTTTACCNANGNAAAANCTTGGTNAAACCTNCAAANNTTNNCNAAATTTAANTATNCCCCGCNTNGAAACANCTNNNAANTGCNGGNGNAATNCCCGTNTCACNTGTCGTNNNTCCAAGGGTNTGGCTTTAGTNTTGGGCAAGGGGNANCCCNAGGTTGGGCCCCCAAGGAAACTTGNCCCNNAACNNGGGGNANAATTTTTNNCACNNCCNNTNNNTNTGNNNCNCNCCCTNTTTTNNNNNNNTTGNCGNNTNCNCCACGGGNNNNTTNCNACCCNTNTGTGNAANGTNNNGGCNGNNGGTTGCTTGGCNNCNNTTGNTCATNGGTTGTGNTTGTNNTNCTNCGAGTTNGCGCCCCNNGGNNTTNNANNNNNGTNNAGTTNTTTTACGNNCNGNNNGNGGTNNNCNGGGNGTGNCNNTNNNTNCNCGGNNCNNNTTTNNNGNNNTGNNNNNNNNNNNNGNATTTGTNNNNNGNGGGNNCNGCTGNNNNGTTCNNGNNNNCNCGAGTTNTTTCNTNTNTNNNNNTGTNNNNNGNACTGGNNNNNNGNTNGGGTNTNGTGTTTNGTGNTNNNATNGANTNNNTTCNCTTNGTNNNNCNNNGTNTNNNNTTGANANNNTNNANTTNNNCGTNNTTNGNNNNTNNNTNNGGTTNNTGNNCNGNNNGNANCCNTTTGNNN]




>consensus_12730#1
TTTTTTTTTGAAAAATTGCAATGGAATTATCAGCTGAGTAGATCAACTACTATTTGGNTC
ANTTCGNNTTNACAAGTTACAATANCATNCANGTTTCCCCNGTGAGGNCGGNAGGTGTCA
AAAGTTTACCNANGNAAAANCTTGGTNAAACCTNCAAANNTTNNCNAAATTTAANTATNC
CCCGCNTNGAAACANCTNNNAANTGCNGGNGNAATNCCCGTNTCACNTGTCGTNNNTCCA
AGGGTNTGGCTTTAGTNTTGGGCAAGGGGNANCCCNAGGTTGGGCCCCCAAGGAAACTTG
NCCCNNAACNNGGGGNANAATTTTTNNCACNNCCNNTNNNTNTGNNNCNCNCCCTNTTTT
NNNNNNNTTGNCGNNTNCNCCACGGGNNNNTTNCNACCCNTNTGTGNAANGTNNNGGCNG
NNGGTTGCTTGGCNNCNNTTGNTCATNGGTTGTGNTTGTNNTNCTNCGAGTTNGCGCCCC
NNGGNNTTNNANNNNNGTNNAGTTNTTTTACGNNCNGNNNGNGGTNNNCNGGGNGTGNCN
NTNNNTNCNCGGNNCNNNTTTNNNGNNNTGNNNNNNNNNNNNGNATTTGTNNNNNGNGGG
NNCNGCTGNNNNGTTCNNGNNNNCNCGAGTTNTTTCNTNTNTNNNNNTGTNNNNNGNACT
GGNNNNNNGNTNGGGTNTNGTGTTTNGTGNTNNNATNGANTNNNTTCNCTTNGTNNNNCN
NNGTNTNNNNTTGANANNNTNNANTTNNNCGTNNTTNGNNNNTNNNTNNGGTTNNTGNNC
NGNNNGNANCCNTTTGNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12730#0      TCTCCTTCAAAGCAGGAGAAAAGAAGAAAAATTGATTGCTCTCTCGTTCCGTTCCGGAGG 60
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AGAGAGAGAGAGAGAGAGAGAGGAGAGCGGCGGCGATGGCGTCGTCGTCGTCGTCGGCGT 120
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      CGAGCAGGTTCTCGCCGGCGCTGCAGGCGTCGGATCTCAACGACTTCATCGCCCCCTCGC 180
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AGGACTGCATCATCTCCCTCAACAAGGGCCCCTCCGCCCGCCGCCTTCCGATCAAACAAA 240
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AGGAAATTGCAGTGAGCACAAATCCTCCAGAGGAAGCAGTCAAGATTTCACTGAAGGACT 300
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      GTTTGGCTTGCAGTGGTTGCATAACATCAGCAGAAACAGTTATGCTTGAGAAGCAAAGCT 360
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      TGGGTGACTTCATTACTCGCATCAACTCTGACAAAGCTGTCATAGTATCGGTCTCTCCAC 420
consensus_12730#1      ---------------------TTTTTTTTTGAAAAATTGCAATGGAATTATCAGCTGAGT 39
                                            *    * *   ***  **  ** * **      **    

consensus_12730#0      AGTCAAGAGCATCGCTAGCTGCATTCTTTGGTCTTTCTCAATCACAGGTTTTCAGAAAAC 480
consensus_12730#1      AGATCA----ACTACTATTTGGNTCANTTCGNNTTNACAAGTTACAA-----TANCATNC 90
                       **   *    *   ***  **  *   ** *  **    * * ***       *  *  *

consensus_12730#0      TCACTGCGCTGTTCAAGTCGATGGGCGTAAAGGCAGTTTAC-GACACAAGTTCCAGTCGA 539
consensus_12730#1      ANGTTTCCCCNGTGAGGNCGGNAGGTGTCAAA--AGTTTACCNANGNAAAANCTTGGTNA 148
                           * * *   * * * **   ** ** **   *******  *   **   *  *   *

consensus_12730#0      GATCTGTCCCTAATTGAAGCATGCAGTGAATTTGTTACTCGTTATCATCAAAACCAGTTA 599
consensus_12730#1      AACCTNC---------AAANNTTNNCNAAATTTAANTATNCCCCGCNTNGAAAC-ANCTN 198
                        * **           **   *      *****     *      * *  **** *  * 

consensus_12730#0      TCTAGTGGCAAAGAAGCTGGAAAAAATCTTCCCATGCTTTCATCTGCATGCCCAGGTTGG 659
consensus_12730#1      NNAANTGCNGGNGNAATNCCCGTNTCACNTGTCGTNNNTCCAAGGGTNTGGCT---TTAG 255
                          * **     * *            * *  * *   * **   *  ** *    ** *

consensus_12730#0      ATATGCTATGCAGAAAAGACTCTCGGTTCATTTATCTTGCCTTACATCTCAGCTGTGAAG 719
consensus_12730#1      ---TNTTGGGCAAGGGGNANCCCNAG---GTTGGGCCCCCAAGGAAACTTGNCCCNNAA- 308
                          *  *  ***      *  *   *    **   *   *     * **   *    ** 

consensus_12730#0      AGCCCCCAACAGGCCATTGGTGCTGCTATCAAGCATCATATGGTTGGAAAACTTGGTCTG 779
consensus_12730#1      ----CNNGGGGNANAATTTTTNNCACNNCCNNTNNN--TNTGNNNCNCNCCCTNTTTTNN 362
                           *          ***  *    *   *        * **         **   *   

consensus_12730#0      AAGCCACATGATGTTTATCATGTTACTGTGATGCCCTGTTATGATAAAAAACTAGAAGCT 839
consensus_12730#1      NNNNNTTGNCGNNTNCNCCACGGGNNNNTTNCNACCCNTNTGTGNAANGTNNNGGCNGNN 422
                                    *    ** *      *     **  *      **       *  *  

consensus_12730#0      GTTAGGGATGATTTTGTTTTCTCAGTGGAAGATAAAGATGTTACAGAGGTAGATTCCGTA 899
consensus_12730#1      GGTTGCT-TGGCNNCNNTTGNTCATNGGTTGTGNTTGTNNTNCTNCGAGTTNGCGCCCCN 481
                       * * *   **       **  ***  **  *     *   *       **     **   

consensus_12730#0      TTAACCACTGGTGAAGTGTTAGATTTGATACAGTCCAGATCTGTTGATTTCAAGACCCTA 959
consensus_12730#1      NGGNNTTNNANNNNNGTNN-AGTTNTTTTACGNNCNGNNN--GNGGTNNNCNGGGNGTGN 538
                                      **   ** * *  ***   *       *  *    *  *      

consensus_12730#0      GAGGAGTCTCCCATGGACAGATTATTAACCAATGTTGATGATGACGGTCAACTATATGGG 1019
consensus_12730#1      CNNTNNNTNCNCGGNNCNNNTTTNNNGNNNTGNNNNNNNNNNNNGNATTTGTNNNNNGNG 598
                                * *         **                        *         * *

consensus_12730#0      GTTTCTGGTGGCTCAGGGGGTTATGCAGAAAC-AGTCTTTCGACATGCGGCACATGTTCT 1078
consensus_12730#1      GGNNCNGCTGNNNN----GTTCNNGNNNNCNCGAGTTNTTTCNTNTNTNNNNN-TGTNNN 653
                       *   * * **        * *   *      * ***  **     *        ***   

consensus_12730#0      CTTCGATAGAAAAATTGAAGGATCAGTTGATTTCAGAATCTTACGAAATTCAGATT-TTC 1137
consensus_12730#1      NNGNACTGGNNNNNNGNTNGGGTNTNGTG-TTTNGTGNTNNNATNGANTNNNTTCNCTTN 712
                             * *          ** *    ** ***     *   *   * *        ** 

consensus_12730#0      GTGAGGTTACACTGGAGGTGGAGGGCAAACCTGTTCTTAAGTTTGCACTTTGTTATGGAT 1197
consensus_12730#1      GTNNNNCNNNGTNTNNNNTTGANANNNTNNANTTNNNCGTNNTTNGNNNNTNNNTNNGGT 772
                       **                * **           *        **      *      * *

consensus_12730#0      TCAGAAATCTGCAGAACATTATTAGGAAGATTAAGATGGGAAAATGCGAATATCACTTTA 1257
consensus_12730#1      TNNTGNNCNGNNNGNANCCNTTTGNNN--------------------------------- 799
                       *            * *     **                                     

consensus_12730#0      TTGAAGTTATGGCATGTCCTTCAGGCTGCCTGAATGGGGGAGGTCAAATAAAACCTGCCA 1317
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AAGGCCAGTCTGCGAAGGATCTTATCCAACTACTAGAGGATGTGTACATCCAAGATGTAT 1377
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      CGGTATCCAACCCCTTCGAGAACCCTATTGCGAAAAGATTATATGATGAATGGCTTGGGC 1437
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AACCTGGTTCAGAAAACGCAAAGAAGTATCTACACACGAAGTATCACCCAGTGGTGAAAA 1497
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      GCGTGGCATCGCAGTTGCAGAATTGGTGATAACACAGTGGTGGAAAGCATTTCCCAGTGT 1557
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      GGGCAGTTGCTTGTGCCATCTTGGTGCCCTGCCCACACTAAGCAAACACTGAACACACAG 1617
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      AAAAGAAATACACGTCATCAAAGATTTTGCATGCGGGCAAATGAATTTTGTTAGATTGTA 1677
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      GGTTTTACCAGCTTTTCTTGGTAATGTTTGTATACTACCTCCTCACTGGGAAACACAGAT 1737
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      GAGATTGTAACATGTAAAAACGAAGTGAACCAAATAGTAGTTGATCTACTCAGCTGATAA 1797
consensus_12730#1      ------------------------------------------------------------
                                                                                   

consensus_12730#0      TTCCATTGCAATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1845
consensus_12730#1      ------------------------------------------------