cluster # 12744

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Oryza sativa
cluster # 12744 cluster # 12744 Sequences # 11 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12744#0 length = 2521 sequences # 10

consensus_12744#1 length = 422 sequences # 1

consensusID : consensus_12744#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2521
fasta sequence

                              [TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCGA-NANCNA-NTGCACCCCACGTTCGCGCGCGGCTTAAATTAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTCTCTCCCTTGTTTTTTTTTAAATTTTTTTATAAGCTGCGAGGCCGCGTCGTCCGCCATTCTCTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGGCATGTCCGTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAAGCTCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCT-CGACAAGAACAGCGCGCAGTTCCATCGCCAGCTG-AGCCACGACAGCAGCAGCAGCAGCAGCGAC-ACCGCCGAC-ATGC-ACGAGCCTCACGGCAA-TGGCAGCGGGGGCACTCCCCCGCTGCCCAACGGGA-GAGCCGCCGCCGCAGGCGCGCCGCGCTCCCGCTTCGGCCGCGACGGGCCGCCCTCCGATTTGGACGTGATGAAGGAGAGGTTCGCGAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTGTCGTCGGCGCTGGCGCTGTCGAATGCGATCACGAACCTGGCGGCGTCCGTGTTCGGCGAGCACCGCAAGCTGGAGCCCATGGCGCCGGACACCAAGGAGCGGTGGAAGAAGGAGGTCGGGTGGCTCCTCTCCGTCACCGACCACATCGTCGAGTTCGTCCCCACCCGCCAGACCGCCGAGAACGGCACCACCATGGAGATCATGTCCACCGCCCAGCGCCGCGACCTCCAGATGAACGTCCCCGCCCTCCGCAAGCTCGACGCCATGCTCATCGGGTACATGGACAACTTCGTGGACCAGAGCGAGTTCTGGTACGAGAAGGGAGGGGACAACAAGAGGGACGACGACAAGTGGTGGATGCCGACGGTGAAGGTGCCGGCGGAGGGGCTATCGGAGGTGACGAGGAAGTGGCTGCAGTACCAGAAGGAGTGCGTGAACCAGGTGCTGAAGGCGGCCATGGCGATCAACGCGCAGGTGCTGGTGGAGATGGAGATCCCGGAGGTGTACATCGAGTCGCTGCCCAAGAAGGGCAAGACCAGCCTCGGCGACGCCATCTACCGGAGCATCACCGACGAGGAGTTCGACCCGATCGAGTTCCTGGAAGGCGTGGACCTGTCCACGGAGCAGCAAGGTGCTCGACCTCAAGAACCGCATCGAGGCGTCCACCATCATCTGGAAGCGCAAGATGCAGACCAAGCAGGAGGCCAAGTCGTCGTGGGCTCCATCATCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCACCTCCTCAAGCTCCAGTTCCCCGGCACCCCTCAGTCCCAGCTCGACATCTCCAAGATCCAATACAACCGGGACGTGGGGTACGCGATACTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTACAGCGTGATGTCGAGGATAGAGGACGTGCTGGGGGCGGACGCGGCGGCGCAGAACCTGACGGCGACGGAGGCGGCGAGGAGGCTGATGGACGGGGACGCGGCGGCGAGGAAGCTGGACGCCATGGAGGAGCTGGAGAAGCT-CAACGAGGCGCCGGCGTCCATGACGCTCTACGACTTCATGGGGTGGCACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCACCCTCGACGAGGCCGGCGAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTCTCCTACGTCGACAGCCTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGATCACCACCACCGCCGCCATTACACTCTCTCTCACACGCACAAGATGATCGGCACCATCGCCGGAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTAAAAAAAA]

[+] EMBL AU063918             [TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCGATNANCNA NTGCACCCCACGTTCGCGCGCGGCTTAAATTAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTCTCTCCCTTGTTTTTTTTTAAATTTTTTTATAAGCTGCGAGGCCGCGTCGTCCGCCATTCTCTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGGCATGTCCGTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAAGAGGCGCGGCGGCGGAAGCGGCGGTGA CGAACGGCGGGTG CANGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK072271             [                                      TCCGGCCGCGAGCGCGCGCGA GCGCGACATGCACCCCACGTTCGCGCGCGGCTTAAATTAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTCTCTCCCTTGTTTTTTTTTAAATTTTTTTATAAGCTGCGAGGCCGCGTCGTCCGCCATTCTCTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGGCATGTCCGTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAAGCTCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCT CGACAAGAACAGCGCGCAGTTCCATCGCCAGCTG AGCCACGACAGCAGCAGCAGCAGCAGCGAC ACCGCCGAC ATGC ACGAGCCTCACGGCAA TGGCAGCGGGGGCACTCCCCCGCTGCCCAACGGGA GAGCCGCCGCCGCAGGCGCGCCGCGCTCCCGCTTCGGCCGCGACGGGCCGCCCTCCGATTTGGACGTGATGAAGGAGAGGTTCGCGAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTGTCGTCGGCGCTGGCGCTGTCGAATGCGATCACGAACCTGGCGGCGTCCGTGTTCGGCGAGCACCGCAAGCTGGAGCCCATGGCGCCGGACACCAAGGAGCGGTGGAAGAAGGAGGTCGGGTGGCTCCTCTCCGTCACCGACCACATCGTCGAGTTCGTCCCCACCCGCCAGACCGCCGAGAACGGCACCACCATGGAGATCATGTCCACCGCCCAGCGCCGCGACCTCCAGATGAACGTCCCCGCCCTCCGCAAGCTCGACGCCATGCTCATCGGGTACATGGACAACTTCGTGGACCAGAGCGAGTTCTGGTACGAGAAGGGAGGGGACAACAAGAGGGACGACGACAAGTGGTGGATGCCGACGGTGAAGGTGCCGGCGGAGGGGCTATCGGAGGTGACGAGGAAGTGGCTGCAGTACCAGAAGGAGTGCGTGAACCAGGTGCTGAAGGCGGCCATGGCGATCAACGCGCAGGTGCTGGTGGAGATGGAGATCCCGGAGGTGTACATCGAGTCGCTGCCCAAGAAGGGCAAGACCAGCCTCGGCGACGCCATCTACCGGAGCATCACCGACGAGGAGTTCGACCCGATCGAGTTCCTGGAAGGCGTGGACCTGTCCACGGAGCAGCAAGGTGCTCGACCTCAAGAACCGCATCGAGGCGTCCACCATCATCTGGAAGCGCAAGATGCAGACCAAGCAGGAGGCCAAGTCGTCGTGGGCTCCATCATCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCACCTCCTCAAGCTCCAGTTCCCCGGCACCCCTCAGTCCCAGCTCGACATCTCCAAGATCCAATACAACCGGGACGTGGGGTACGCGATACTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTACAGCGTGATGTCGAGGATAGAGGACGTGCTGGGGGCGGACGCGGCGGCGCAGAACCTGACGGCGACGGAGGCGGCGAGGAGGCTGATGGACGGGGACGCGGCGGCGAGGAAGCTGGACGCCATGGAGGAGCTGGAGAAGCT CAACGAGGCGCCGGCGTCCATGACGCTCTACGACTTCATGGGGTGGCACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCACCCTCGACGAGGCCGGCGAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTCTCCTACGTCGACAGCCTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGATCACCACCACCGCCGCCATTACACTCTCTCTCACACGCACAAGATGATCGGCACCATCGCCGGAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAA                  ]
[+] EMBL C72080               [                                                                                                                                                                                                                            GCCGGCCGTGCGTAGTGCGTGGCATGTCCGTNTTCCCCCTAGCAGCTGATTGATTTNATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTAAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCNAAG TCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCT CGACAAGAACAACGCGCAGTTCCATCGCCAGCTGAAGCCACGACANCAACAAGAACAACAANCACAACCGCCGACAATGCAACGAGCCTCACGGCAATTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU069768             [                                                                                                                                                                                                                                                         GTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAA CTCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCT CGACAAGAACAGCGCGCAGTTCCATCGCCAGCTG AGCCACGACAGCAGCAGCAGCAGCAGCGAC ACCGCCGAC ATGC ACGAGCCTCACGGCAA TGGCAGCGGGGGCACTCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU182419             [                                                                                                                                                                                                                                                         GTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTNTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCAAGCGTGAGGAGGCGCGGNGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAANCTCGAGGCGGNGGGCTGGGTGATGGTGCGGTTCCTCCGNCGCCATAGCCTNAGACAAGAACAGCGCGCAGTTCCATCGCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL AU069769             [                                                                                                                                                                                                                                                                                                     TGCTTGATTACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGTGCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGAGGCGCGGCGGCGGAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAA CTCGAGGCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCT CGACAAGAACAGCGCGCAGTTCCATCTCCAGCTG AGCCACGACAGCAGCAGCAGCAGCAGCGAC ACCGCCGAC ATGC ACGAGCCTCACGGCAA TNGCAGCGGGGGCACTCCCCCGCTGCCCAANGGGAGGAGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU101161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGCTNAAACGAGGCGCCGGCGTCCATGACGCTNTACGACTTCATGGGGTGGCACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCA CCTCGACGAGGCCGGCGAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTCTCCTACGTCGACAGCCTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGATCACCACCACCGCCGCCATTACACTCTCTCTCACACGCACAAGATGATCGGCACCATCGCCGGAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTAAAAA   ]
[+] EMBL AU093854             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGGAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCNAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTNCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACNCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTAAAAA   ]
[+] EMBL AU182420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGACGGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTACAAAAAA]
[+] EMBL C98430               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAATNCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCCCCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTAAAAA   ]




>consensus_12744#0
TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCGAN
ANCNANTGCACCCCACGTTCGCGCGCGGCTTAAATTAGGCAAGAGGCGCGCCACGGTCGC
GCCTTCTTTGTCTCTCCCTTGTTTTTTTTTAAATTTTTTTATAAGCTGCGAGGCCGCGTC
GTCCGCCATTCTCTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGG
CATGTCCGTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTTGCTTGATT
ACTTCCTTCGATCTTGCCCTGGTTGGTTGGTGGTGGTGGTGGGTTTTGCTATCTCTGCGT
GCGTGTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGAGGCGCGGCGGCGGAGGCGGCGG
TGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAAGCTCGAGGCGGTGGGCT
GGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCTCGACAAGAACAGCGCGCAGTTCCATC
GCCAGCTGAGCCACGACAGCAGCAGCAGCAGCAGCGACACCGCCGACATGCACGAGCCTC
ACGGCAATGGCAGCGGGGGCACTCCCCCGCTGCCCAACGGGAGAGCCGCCGCCGCAGGCG
CGCCGCGCTCCCGCTTCGGCCGCGACGGGCCGCCCTCCGATTTGGACGTGATGAAGGAGA
GGTTCGCGAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGCGTGTCGTCGG
CGCTGGCGCTGTCGAATGCGATCACGAACCTGGCGGCGTCCGTGTTCGGCGAGCACCGCA
AGCTGGAGCCCATGGCGCCGGACACCAAGGAGCGGTGGAAGAAGGAGGTCGGGTGGCTCC
TCTCCGTCACCGACCACATCGTCGAGTTCGTCCCCACCCGCCAGACCGCCGAGAACGGCA
CCACCATGGAGATCATGTCCACCGCCCAGCGCCGCGACCTCCAGATGAACGTCCCCGCCC
TCCGCAAGCTCGACGCCATGCTCATCGGGTACATGGACAACTTCGTGGACCAGAGCGAGT
TCTGGTACGAGAAGGGAGGGGACAACAAGAGGGACGACGACAAGTGGTGGATGCCGACGG
TGAAGGTGCCGGCGGAGGGGCTATCGGAGGTGACGAGGAAGTGGCTGCAGTACCAGAAGG
AGTGCGTGAACCAGGTGCTGAAGGCGGCCATGGCGATCAACGCGCAGGTGCTGGTGGAGA
TGGAGATCCCGGAGGTGTACATCGAGTCGCTGCCCAAGAAGGGCAAGACCAGCCTCGGCG
ACGCCATCTACCGGAGCATCACCGACGAGGAGTTCGACCCGATCGAGTTCCTGGAAGGCG
TGGACCTGTCCACGGAGCAGCAAGGTGCTCGACCTCAAGAACCGCATCGAGGCGTCCACC
ATCATCTGGAAGCGCAAGATGCAGACCAAGCAGGAGGCCAAGTCGTCGTGGGCTCCATCA
TCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTCCACCTCCTCA
AGCTCCAGTTCCCCGGCACCCCTCAGTCCCAGCTCGACATCTCCAAGATCCAATACAACC
GGGACGTGGGGTACGCGATACTGGAGAGCTACTCGAGGGTGCTGGAGAGCCTGGCGTACA
GCGTGATGTCGAGGATAGAGGACGTGCTGGGGGCGGACGCGGCGGCGCAGAACCTGACGG
CGACGGAGGCGGCGAGGAGGCTGATGGACGGGGACGCGGCGGCGAGGAAGCTGGACGCCA
TGGAGGAGCTGGAGAAGCTCAACGAGGCGCCGGCGTCCATGACGCTCTACGACTTCATGG
GGTGGCACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCACCCTCGACGAGG
CCGGCGAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTCTCCTACGTCG
ACAGCCTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGATCACCACCACCGC
CGCCATTACACTCTCTCTCACACGCACAAGATGATCGGCACCATCGCCGGAGTCGGACAA
GATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGACGGACACTAGA
GATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCAGCATCTAATC
TCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCTTTTTTTTTCT
TCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCATCTGCAATACC
TGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTACCAAGCAGTTC
TGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATGTAACTGGGTG
GACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTTGTTAAAAAAA
A

consensusID : consensus_12744#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 422
fasta sequence

                              [TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCNANNACCANTGGCACCCCACGTTCGCGCGCGGNTTAAATNAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTNTCTCCCTTGTTTTTTTTNAAATTTTTTNATAAGCTGCGAGGCCGCGTCGTCCGCNATTNTNTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGGNATGTCCGTNTTCCCCCTAGCAGCTGATTGATTTNATTTGGTTTTTTTNTTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGGTTGGGTTGGGTGGTGGTGGTGGGTTTTTGCTAATCTCTGCGGTTCGTTNTTCCGGCCGTNTCGGCGGCGGCGAACGTAAGGAAGGCGCGGCGGCGGA]

[+] EMBL AU091858             [TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCNANNACCANTGGCACCCCACGTTCGCGCGCGGNTTAAATNAGGCAAGAGGCGCGCCACGGTCGCGCCTTCTTTGTNTCTCCCTTGTTTTTTTTNAAATTTTTTNATAAGCTGCGAGGCCGCGTCGTCCGCNATTNTNTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTGGNATGTCCGTNTTCCCCCTAGCAGCTGATTGATTTNATTTGGTTTTTTTNTTTTGCTTGATTACTTCCTTCGATCTTGCCCTGGGTTGGGTTGGGTGGTGGTGGTGGGTTTTTGCTAATCTCTGCGGTTCGTTNTTCCGGCCGTNTCGGCGGCGGCGAACGTAAGGAAGGCGCGGCGGCGGA]




>consensus_12744#1
TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCNAN
NACCANTGGCACCCCACGTTCGCGCGCGGNTTAAATNAGGCAAGAGGCGCGCCACGGTCG
CGCCTTCTTTGTNTCTCCCTTGTTTTTTTTNAAATTTTTTNATAAGCTGCGAGGCCGCGT
CGTCCGCNATTNTNTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTG
GNATGTCCGTNTTCCCCCTAGCAGCTGATTGATTTNATTTGGTTTTTTTNTTTTGCTTGA
TTACTTCCTTCGATCTTGCCCTGGGTTGGGTTGGGTGGTGGTGGTGGGTTTTTGCTAATC
TCTGCGGTTCGTTNTTCCGGCCGTNTCGGCGGCGGCGAACGTAAGGAAGGCGCGGCGGCG
GA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12744#0      TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCGAN 60
consensus_12744#1      TTCTCCTCCTCCTCCCCCTCCTCATCTCCCATCGCAAATCCGGCCGCGAGNGCGCGCNAN 60
                       ********************************************************* **

consensus_12744#0      ANCNANTG-CACCCCACGTTCGCGCGCGGCTTAAATTAGGCAAGAGGCGCGCCACGGTCG 119
consensus_12744#1      NACCANTGGCACCCCACGTTCGCGCGCGGNTTAAATNAGGCAAGAGGCGCGCCACGGTCG 120
                         * **** ******************** ****** ***********************

consensus_12744#0      CGCCTTCTTTGTCTCTCCCTTGTTTTTTTTTAAATTTTTTTATAAGCTGCGAGGCCGCGT 179
consensus_12744#1      CGCCTTCTTTGTNTCTCCCTTGTTTTTTTTNAAATTTTTTNATAAGCTGCGAGGCCGCGT 180
                       ************ ***************** ********* *******************

consensus_12744#0      CGTCCGCCATTCTCTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTG 239
consensus_12744#1      CGTCCGCNATTNTNTTCTTCTTCTTGTTGCACACCGCCGGCCGGCCGTGCGTAGTGCGTG 240
                       ******* *** * **********************************************

consensus_12744#0      GCATGTCCGTGTTCCCCCTAGCAGCTGATTGATTTGATTTGGTTTTTTTCTTT-GCTTGA 298
consensus_12744#1      GNATGTCCGTNTTCCCCCTAGCAGCTGATTGATTTNATTTGGTTTTTTTNTTTTGCTTGA 300
                       * ******** ************************ ************* *** ******

consensus_12744#0      TTACTTCCTTCGATCTTGCCCTGGTT--GGTTGG-TGGTGGTGGTGGGTTTT-GCTA-TC 353
consensus_12744#1      TTACTTCCTTCGATCTTGCCCTGGGTTGGGTTGGGTGGTGGTGGTGGGTTTTTGCTAATC 360
                       ************************ *  ****** ***************** **** **

consensus_12744#0      TCTGCG-TGCGT-GTTCCGGCCGTGTCGGCGGCGGCGAGCGTGAGGA-GGCGCGGCGGCG 410
consensus_12744#1      TCTGCGGTTCGTTNTTCCGGCCGTNTCGGCGGCGGCGAACGTAAGGAAGGCGCGGCGGCG 420
                       ****** * ***  ********** ************* *** **** ************

consensus_12744#0      GAGGCGGCGGTGAGCGAACGGCGGGTGCCACGTGCCCACGCCTTGCGCGCGAAGCTCGAG 470
consensus_12744#1      GA---------------------------------------------------------- 422
                       **                                                          

consensus_12744#0      GCGGTGGGCTGGGTGATGGTGCGGTTCCTCCGGCGCCATAGCCTCGACAAGAACAGCGCG 530
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CAGTTCCATCGCCAGCTGAGCCACGACAGCAGCAGCAGCAGCAGCGACACCGCCGACATG 590
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CACGAGCCTCACGGCAATGGCAGCGGGGGCACTCCCCCGCTGCCCAACGGGAGAGCCGCC 650
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GCCGCAGGCGCGCCGCGCTCCCGCTTCGGCCGCGACGGGCCGCCCTCCGATTTGGACGTG 710
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      ATGAAGGAGAGGTTCGCGAAGCTCCTGCTGGGCGAGGACATGTCCGGCACCGGCAAGGGC 770
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GTGTCGTCGGCGCTGGCGCTGTCGAATGCGATCACGAACCTGGCGGCGTCCGTGTTCGGC 830
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GAGCACCGCAAGCTGGAGCCCATGGCGCCGGACACCAAGGAGCGGTGGAAGAAGGAGGTC 890
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GGGTGGCTCCTCTCCGTCACCGACCACATCGTCGAGTTCGTCCCCACCCGCCAGACCGCC 950
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GAGAACGGCACCACCATGGAGATCATGTCCACCGCCCAGCGCCGCGACCTCCAGATGAAC 1010
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GTCCCCGCCCTCCGCAAGCTCGACGCCATGCTCATCGGGTACATGGACAACTTCGTGGAC 1070
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CAGAGCGAGTTCTGGTACGAGAAGGGAGGGGACAACAAGAGGGACGACGACAAGTGGTGG 1130
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      ATGCCGACGGTGAAGGTGCCGGCGGAGGGGCTATCGGAGGTGACGAGGAAGTGGCTGCAG 1190
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      TACCAGAAGGAGTGCGTGAACCAGGTGCTGAAGGCGGCCATGGCGATCAACGCGCAGGTG 1250
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTGGTGGAGATGGAGATCCCGGAGGTGTACATCGAGTCGCTGCCCAAGAAGGGCAAGACC 1310
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      AGCCTCGGCGACGCCATCTACCGGAGCATCACCGACGAGGAGTTCGACCCGATCGAGTTC 1370
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTGGAAGGCGTGGACCTGTCCACGGAGCAGCAAGGTGCTCGACCTCAAGAACCGCATCGA 1430
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GGCGTCCACCATCATCTGGAAGCGCAAGATGCAGACCAAGCAGGAGGCCAAGTCGTCGTG 1490
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GGCTCCATCATCAGCTTCGAGAAGCGCGAGCAGTTCGAGGAGCGCGCCGAGACCATCCTC 1550
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CACCTCCTCAAGCTCCAGTTCCCCGGCACCCCTCAGTCCCAGCTCGACATCTCCAAGATC 1610
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CAATACAACCGGGACGTGGGGTACGCGATACTGGAGAGCTACTCGAGGGTGCTGGAGAGC 1670
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTGGCGTACAGCGTGATGTCGAGGATAGAGGACGTGCTGGGGGCGGACGCGGCGGCGCAG 1730
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      AACCTGACGGCGACGGAGGCGGCGAGGAGGCTGATGGACGGGGACGCGGCGGCGAGGAAG 1790
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTGGACGCCATGGAGGAGCTGGAGAAGCTCAACGAGGCGCCGGCGTCCATGACGCTCTAC 1850
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GACTTCATGGGGTGGCACTTCGACCAGGACGAGCTCATGAGGAAGAAGGAGGAAGGCACC 1910
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTCGACGAGGCCGGCGAGGCCAAGCTCAAGAAGGCCCCCAGCCTCGCCCCCAAGAAGTTC 1970
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      TCCTACGTCGACAGCCTCTCCGCCGGCGGCATGAGGAGCCCCTCCGCGCGCCACTGATCA 2030
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CCACCACCGCCGCCATTACACTCTCTCTCACACGCACAAGATGATCGGCACCATCGCCGG 2090
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      AGTCGGACAAGATGACCGGCGCCGCCGCTTTCTTGCACGCTGTACATAACCGAACTCGAC 2150
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GGACACTAGAGATCAACGACGACACTGGAGTAGAGATCAGCTTGATTATTAATCTAATCA 2210
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GCATCTAATCTCTTCTTACCAATGCCAATTAATGCTGGGAGGTAATTACTATTGATTTCT 2270
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      TTTTTTTTCTTCCTTCTCCATCTTTATTCTAGAGGGGGAAAAGAACAAAGGTGGTTTCAT 2330
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CTGCAATACCTGCAATTCGACGCCATTGCTACTGATCATGTAACTAGTACTGGTTTGTAC 2390
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      CAAGCAGTTCTGAGTTCTCTTGAAAAAAGGAGAAGATGAACTCCTTGGGATGTATGTATG 2450
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      TAACTGGGTGGACGGGGAACACACACTGTATTCTTTCATTTGTTTCAAACTAATCTTTTT 2510
consensus_12744#1      ------------------------------------------------------------
                                                                                   

consensus_12744#0      GTTAAAAAAAA 2521
consensus_12744#1      -----------