These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12753#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1847 fasta sequence [TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGATGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATGTTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTCTACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGGAATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGCAGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTTTTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTAGGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAAAGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTGTTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATGGATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTA] [+] EMBL AK119615 [TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGATGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATGTTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTCTACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGGAATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGCAGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTTTTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTAGGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAAAGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTGTTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATGGATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTA] consensusID : consensus_12753#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1165 fasta sequence [TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC-TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT-GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT-CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA-CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT-CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAAAAAAAAAAAAAAA] [+] EMBL AU101084 [TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCC CCGCGTCGGCGCTTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAA ] [+] EMBL AK068891 [ CGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCCTTACAGGAATGTTAATGCCATACCATGGATGT ] [+] EMBL CF325171 [ CGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAA ] [+] EMBL CF325194 [ CGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGC TCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTGACACTTGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCTGTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAGTACTT GGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGT CCAGTAGATGCCTTTTGCCTTCTG ] [+] EMBL AU092585 [ GCAGTACTTGGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAANCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGACCAA CAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGNCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAA ] [+] EMBL AU101085 [ TCTTGATCCATCAGCTGGN CCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGAGATGGGNCCAACCAGTTGGATGGCCGAAAAAATTAGCCCNTGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTNGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCNCTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACANCGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATACAGTACNAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTT CTTACAGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CA999731 [ CGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAGTGATGTCCGCATCAAAC ] consensusID : consensus_12753#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence [GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTT] [+] EMBL CF323301 [GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAATTT] [+] EMBL CF323793 [GGAGGGGGAGAGGACGAGAGGCGGCGGGCGGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTCGCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCGGGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTGGTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGTATCTACAATGTATTGCTGCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTGAACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGACGGA TGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATGACTACAGATGAAT ] consensusID : consensus_12753#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 438 fasta sequence [CGGGCGGCGGAGTAGATCGCCGGCGGTNGCGCCCGNTNCGGTCNTNCGNACCCCATGGAGGTCGCTGCTGCAGNAGCGTTGGACGGCAATGCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGACNGGCAGGCGCGANATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTTCAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGAGANTTTGGTTTTGGAAGCTTAGTNAAATCGGGATTCAGTACTTTGGACATNCCCAGGGTTTCCATT] [+] EMBL C27615 [CGGGCGGCGGAGTAGATCGCCGGCGGTNGCGCCCGNTNCGGTCNTNCGNACCCCATGGAGGTCGCTGCTGCAGNAGCGTTGGACGGCAATGCCACTTGAAGCACTCCACCTTCTTCCAACTCGCCACGGTGGGTGGACNGGCAGGCGCGANATCGCACCGTCGTATTCAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAAGCAATAAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGATATGTTGGTACTTTACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTTCAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGAGANTTTGGTTTTGGAAGCTTAGTNAAATCGGGATTCAGTACTTTGGACATNCCCAGGGTTTCCATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12753#1 TGGCGCTANGAGGACCGCGTGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGC 60 consensus_12753#3 -------------------------------------------------------CGGGC 5 consensus_12753#0 -------------------TGCGCGGAGGCCGGAGGGGGAGAGGACGAGAGGCGGCGGGC 41 consensus_12753#2 -------------------------------GGAGGGGGAGAGGACGAGAGGCGGCGGGC 29 ***** consensus_12753#1 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 120 consensus_12753#3 GGCGGAGTAGATCGCCGGCGGTNGCGCC--CGNTNCGGTCNTNCGNACCCCATGGAGGTC 63 consensus_12753#0 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 101 consensus_12753#2 GGCGGAGTAGATGGCCGGCGGTGGCGCCGCCGCGTCGGCGCTCTCGACCCCATGGAGGTC 89 ************ ********* ***** ** *** * ************** consensus_12753#1 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 180 consensus_12753#3 GCTGCTGCAGN-AGCGTTGGACGGCAATGCC-ACTTGAAGCACTCCACCTTCTTCCAACT 121 consensus_12753#0 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 161 consensus_12753#2 GCTGCTGCAGCGAGCGTTGGACGGCAATGCCCACTTGAAGCACTCCACCTTCTTCCAACT 149 ********** ******************* **************************** consensus_12753#1 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGG-------- 232 consensus_12753#3 CGCCACGGTGGGTGG-ACNGGCAGGCGCG-ANATCGCACCGTCGTATTCAGG-------- 171 consensus_12753#0 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGG-------- 213 consensus_12753#2 CGCCACGGTGGGTGGCGGCGGCAGGCCGGCGAATCGCACCGTCGTATTCAGGTGTCCGCG 209 *************** ******* * ******************** consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 ------------------------------------------------------------ consensus_12753#2 GGCGTTGCTCCCCTCAAATTTTGTTTTATTTTGCACTGGTTTTGACCCGGGAAATTTTTG 269 consensus_12753#1 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 281 consensus_12753#3 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 220 consensus_12753#0 -----------GGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 262 consensus_12753#2 GTCATGTTAGGGGGTTCCAGGAGCAATCTGATAAGATTCAGATTAATACGGATGCACGAA 329 ************************************************* consensus_12753#1 GCAATAAGAT-TGGTG--AGATCAGGAA-TTGCTCCTTTGGTGAGATATGTTGGTACTTT 337 consensus_12753#3 GCAATAAGAT-TGGTG--AGATCAGGAA-TTGCTCCTTTGGTGAGATATGTTGGTACTTT 276 consensus_12753#0 GCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGT-ATCTACAATGTATTGCT 321 consensus_12753#2 GCAATAAGGTGTGCTGCTAATTCATGTGCTTGTGAAATTCGT-ATCTACAATGTATTGCT 388 ******** * ** ** * *** * *** ** ** * ** ** * consensus_12753#1 ACT-GACACTTGGG-AACAATTCCGTAT-CAGCGGATTCATAGATGTGATTGATGG-TT- 392 consensus_12753#3 ACTTGACACTTNGGGAACAATTCCGTATTCAGCGGATTCATAGATGTTATTTATGGGTT- 335 consensus_12753#0 GCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTG 381 consensus_12753#2 GCAGGAGTGTTCCCGCTCACTGATGATCTCCTTGGATGTCTCGATGTGAGTTGTGCTTTG 448 * ** ** ** * * * **** * ***** * * ** ** consensus_12753#1 --CAAACCCCGAACCTGTCAAGCTACAGCT-GAGAGAGA---GAGCTTGGTTT-GGAAGC 445 consensus_12753#3 --CAAACCCCGAACCTGTTAAGCTACAACTTGAGAGAGA---GANTTTGGTTTTGGAAGC 390 consensus_12753#0 AACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGAC 441 consensus_12753#2 AACAGATTGGTGAGATCAGGAATTGCTCCTTTGGTGAGGTATGATATAGAGATTTGGGAC 508 ** * * * * * * ** * *** ** * * * * * consensus_12753#1 TCAGTAAAATCGAGATTGCAGTACTTGGGACCATGCCCAGGTC-TTCCTATTCCGGATGA 504 consensus_12753#3 TTAGTNAAATCGGGATT-CAGTACTTTGGAC-ATNCCCAGGGT-TTCC-ATT-------- 438 consensus_12753#0 GGAT-GGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATG 500 consensus_12753#2 GGANTGGAGTAGGGTTCACGAATCACGAAAGAACAATTGCATTATTACAACTGCGAAATG 568 * * * * * * * * * * ** * * * consensus_12753#1 TGATCTCATTAAGGATGCTCATCTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCT 564 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 ACTACAGATGAATTTCTAACTTTGTTTGCCTTGCAGATATGTTGGTACTTTACTGACACT 560 consensus_12753#2 ACTACAGATGAATTT--------------------------------------------- 583 consensus_12753#1 TCTGGTTCTTGATCCAGAAAAGGTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAAT 624 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TGGGAACAATTCCGTATCAGCGGATTCATAGATGTGATTGATGGTTCAAACCCCGAACCT 620 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 GTTCACAAGAAACCAGAAGGGAGATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCC 684 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GTCAAGCTACAGCTGAGAGAGAGAGCTTGGTTTGGAAGCTCAGTAAAATCGAGATTGCAG 680 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ATGACTGTTTGCGGATTCTATTGCAGCTCCAAATTTGTTTGTGGATTTATCATGGTCTAC 744 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TACTTGGGACCATGCCCAGGTCTTCCTATTCCGGATGATGATCTCATTAAGGATGCTCAT 740 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 TAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGTGCACTAGGGTTCCCGA 804 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 CTTGATCCATCAGCTGGTCCAGTAGATGCCTTTTGCCTTCTGGTTCTTGATCCAGAAAAG 800 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 TCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACGACACAAATCGATCCGG 864 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GTCGATTATTTGAACTTGAAAAGCAATCAAAGGTTAATGTTCACAAGAAACCAGAAGGGA 860 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 CTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCACGTCTATCCGAGTTAG 924 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GATGGGACCAACAGTTGGATGGCCGAAAAAATTAGCCCATGACTGTTTGCGGATTCTATT 920 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 TGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGAGGAAAAAGAGTCAATA 984 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GCAGCTCCAAATTTGTTTGTGGATTTATCATGGTAAGAAAGTTGTCTTGATTTGAGTATG 980 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 CAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATACTACTACTATAACTCTT 1044 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TTTTCTAGCATTTAGAATGTTTAGGTTGGAGCAATTTGGGATATACATCGCCAGAATTTC 1040 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 GCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATGTATTCCAGTTTCTTAC 1104 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TACCATCTATAAGTTTAGTTGACTTGAACTTATAAGCTGAATGGATATTGTTATTGAAGG 1100 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 AGGAATGTTAATGCCATACCATGGATGTTGTCCTGGCCTTCTAAAAAAAAAAAAAAAAAA 1164 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 AATGTTATTTTCTGAGAATGCTAATCCATCTAGCCACTTCTTAGCTGGGTACGAGCTTGC 1160 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 A----------------------------------------------------------- 1165 consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 AGAACTGCAGCTACCTGTGGCATCCGAGAGAACCAATTTCCATGTTCAAGTTTTCATCTT 1220 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TTATAAAACGAGGGAACCGTTCCTCAAGTTCCCTTATAAACACCTGAACCTTTTCAGGTA 1280 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GGAACCAACACATAGATTGTCCAGATAAACTAGTTTATCTTTTTTGTTTCCCTCGAAAAA 1340 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 AGAAAACGAGTTACCCTTTTATCTTTGAACTGTGGTGTTATGATTTCTTCCGAATGCGTG 1400 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TTGTATGGTGCATGTTTAATTTAGTGACAGTAGAATTTGAATTCCTTTGGTGTGAACATG 1460 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GATGATGCAGGTCTACTAGTACCTCTCTTTTCCGAGCAAACTTTAGGGGAACTGTGATGT 1520 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GCACTAGGGTTCCCGATCTTCCAAAAGGTTCTGATAAACAACGATTTGGGCGGAGTCACG 1580 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 ACACAAATCGATCCGGCTTCTTGAACGCGCACGCTCTTGAGCCCCGCAATCGCAGCACCA 1640 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 CGTCTATCCGAGTTAGTGATGTCCGCATCAAACTGCATATGTTATTCGTTAACAGAGGGA 1700 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 GGAAAAAGAGTCAATACAGTACAAATAAATCAGAGATTAATGGACAGTGCAAATAAATAC 1760 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 ------------------------------------------------------------ consensus_12753#3 ------------------------------------------------------------ consensus_12753#0 TACTACTATAACTCTTGCCTGTACATAGTCATTTTTTCTTGTTTCTCTTGATATTTTATG 1820 consensus_12753#2 ------------------------------------------------------------ consensus_12753#1 --------------------------- consensus_12753#3 --------------------------- consensus_12753#0 TATTCCAGTTTCCTTACAGGAATGTTA 1847 consensus_12753#2 --------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||