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Oryza sativa
cluster # 12761 cluster # 12761       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12761#0 length = 1716 sequences # 10  
consensus_12761#1 length = 313 sequences # 1  

consensusID : consensus_12761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1716
fasta sequence
                              [ACCTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAA-GGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCCCGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGG-CCGCTGGGTGGCCGTCAACCCCGTGCCCGACGCCCTGGTCATCAACATCGGAGATCAAATCCAGGCGCTGAGCAACGACCGGTACAAGAGCGTGCTCCACCGGGTG-ATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCG-CCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCATATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAGATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCACCTTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTCAATCTCAAAATATATTGTTCCAATTTTTATAGATACTTATCTCGAGATAGAATATGTGTTTATAGTAGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAAACATCTTGTAAAGAGCTGTTGCTCGCAAAAAAAAGA]

[+] EMBL CF310313             [ACCTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAAGGGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCTTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK100853             [  CTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAA GGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCTTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCCCACAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGG CCGCTGGGTGGCCGTCAACCCCGTGCCCGACGCCCTGGTCATCAACATCGGAGATCAAATCCAGGCGCTGAGCAACGACCGGTATAAGAGCGTGCTCCACCGGGTG ATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCG CCCTGCACCCGCTGGCGTACCGGCCCTTCAAGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAA  ATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAAT                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL OSR27371A            [                     AGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGNCATTGCCAAGCCTCTCCTGAGCGANCTGNTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB618028             [                             GCCCCACCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAA GGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCCCGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAAGTCCAGCGCAACGGCCCGCTGGGTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB617803             [                             GCCCCACCTAACCATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAA GGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCCCGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGCTGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGG CCGCTGGGTGGCCGTCAACCCCGTGCCCGATGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB618030             [                             GCCCCCCCTTAAAATTACACGGGCATTCCATCTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGAGCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACCGCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGAAACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAACCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAA GGGATGCTGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCGACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGAGCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGTGGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGGCGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACATGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCCCGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB618031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGGCGCTGAGCAACGACCGGTACAAGAGCGTGCTCCACCGGGTG ATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCG CCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCATATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAGATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCCCCTTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTCAATCTCAAAATATATTGTTCCAATTTTTATAGATACTTATCTCGAGATAGAATATGTGTTTATAGTAGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAAACATCTTGTAAAGAGCT                   ]
[-] EMBL CB618029             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTACAAGAGCGTGCTCCACCGGGTG ATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCG CCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCATATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAGATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCACCTTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTCAATCTCAAAATATATTGTTCCAATTTTTATAGATACTTATCTCGAGATAGAATATGTGTTTATAGTAGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAAACATCTTGTAAAGAGCT                   ]
[-] EMBL CF310314             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTCCACCGGGTGTATCGTGAACAGCGAGAGCGAGAGGATCTCCGTGCCGACGTTTTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCGCCCCTGCACCCGCTGGCGTACCGGCCCTTCAAGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB617804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGAGGATCTCCGTGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGGACGGCG CCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAATTCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGGCCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACAGGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCTCCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCTATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCATATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAGATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCACCTTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTCAATCTCAAAATATATTGTTCCAATTTTTATAGATACTTATCTCGAGATAGAATATGTGTTTATAGTAGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAGAAAAAACATCTTGTAAAGAGCTGTTGCTCGCAAAAAAAAGA]


>consensus_12761#0 ACCTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCAT CTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGA GCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACC GCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGA AACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAA CCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAAGGGATGC TGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCG ACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGA GCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGT GGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGG CGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACA TGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCC CGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGC TGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGGCCGCTGGGTGGCCGTCA ACCCCGTGCCCGACGCCCTGGTCATCAACATCGGAGATCAAATCCAGGCGCTGAGCAACG ACCGGTACAAGAGCGTGCTCCACCGGGTGATCGTGAACAGCGAGAGCGAGAGGATCTCCG TGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGG ACGGCGCCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAAT TCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGG CCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACA GGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCT CCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCT ATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCAT ATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAG ATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCACC TTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTCAATCTCAA AATATATTGTTCCAATTTTTATAGATACTTATCTCGAGATAGAATATGTGTTTATAGTAG TAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAA ACATCTTGTAAAGAGCTGTTGCTCGCAAAAAAAAGA



consensusID : consensus_12761#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence
                              [NGAAGTGGGAAAGNTCCGCCAAAATCCNCCCTTTTACCGGGAAGGCAACCTTGGAAATTCCTTTCCTGGCAAAAAATNCTTTCGGCAATTGTTCCAAACCGGTTAGGCGTTCAAATCTCAAAATATATTGTTTCAATTTNTTGTAGATACTTATCTCGAGATAGAATATGTGTTTATAGTTGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAAACATCTTGTAAAGAGCTGTTGCTCGGCAAGTTCATATCTATTTTTTCTCTAGGGCCTGTTACCAAAAAAAA]

[+] EMBL AU162443             [NGAAGTGGGAAAGNTCCGCCAAAATCCNCCCTTTTACCGGGAAGGCAACCTTGGAAATTCCTTTCCTGGCAAAAAATNCTTTCGGCAATTGTTCCAAACCGGTTAGGCGTTCAAATCTCAAAATATATTGTTTCAATTTNTTGTAGATACTTATCTCGAGATAGAATATGTGTTTATAGTTGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAAAAACATCTTGTAAAGAGCTGTTGCTCGGCAAGTTCATATCTATTTTTTCTCTAGGGCCTGTTACCAAAAAAAA]


>consensus_12761#1 NGAAGTGGGAAAGNTCCGCCAAAATCCNCCCTTTTACCGGGAAGGCAACCTTGGAAATTC CTTTCCTGGCAAAAAATNCTTTCGGCAATTGTTCCAAACCGGTTAGGCGTTCAAATCTCA AAATATATTGTTTCAATTTNTTGTAGATACTTATCTCGAGATAGAATATGTGTTTATAGT TGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAAA AAACATCTTGTAAAGAGCTGTTGCTCGGCAAGTTCATATCTATTTTTTCTCTAGGGCCTG TTACCAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12761#0      ACCTCATTAATTGATCAAGGCAGCGAGTAGCCCCAGCTAACCATTACACGGGCATTCCAT 60
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CTCCAGCCATCCCTAGGGCTGTAATTAACATGGCTCCAGCCATTGCCAAGCCTCTCCTGA 120
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      GCGATCTGGTGGCACAATCCGGGCAAGTCCCCTCGAGCCACATTCGTCCGGTTGGCGACC 180
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      GCCCGGACCTCGACAACGTCGACCACGAGTCCGGCGCCGGCATTCCGGTCATCGACCTGA 240
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      AACAGCTCGACGGCCCGGATCGCCGCAAGGTTGTCGAGGCCATCGGTTCGGCGTGCGAAA 300
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CCGACGGTTTTTTCATGGTGAAGAATCACGGGATCCCGGAGGAGGTGGTGGAAGGGATGC 360
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      TGCGCGTGGCGAGGGAGTTCTTCCACATGCCGGAGTCGGAGCGGCTCAAGTGCTATTCCG 420
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ACGACCCCAAGAAGGCGATCCGGCTGTCGACGAGCTTCAACGTGCGCACCGAGAAGGTGA 480
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      GCAACTGGCGCGACTTCCTGCGCCTGCATTGCTACCCTCTCGAGAGCTTCATCGACCAGT 540
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      GGCCCTCCAACCCACCCTCCTTCAGGCAAGTGGTCGGCACCTACTCGAGGGAGGCGAGGG 600
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CGCTGGCGCTGCGGTTGCTGGAGGCGATATCTGAGAGCCTCGGGCTGGAGAGGGGCCACA 660
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      TGGTGTCGGCCATGGGGCGGCAGGCGCAGCACATGGCGGTGAACTACTATCCGCCATGCC 720
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CGCAGCCGGAGCTCACCTACGGCCTGCCGGGGCACAAGGACCCCAATGCCATCACGCTGC 780
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      TGCTCCAGGACGGCGTCTCCGGCCTGCAGGTCCAGCGCAACGGCCGCTGGGTGGCCGTCA 840
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ACCCCGTGCCCGACGCCCTGGTCATCAACATCGGAGATCAAATCCAGGCGCTGAGCAACG 900
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ACCGGTACAAGAGCGTGCTCCACCGGGTGATCGTGAACAGCGAGAGCGAGAGGATCTCCG 960
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      TGCCGACGTTCTACTGCCCGTCCCCGGACGCGGTGATCGCGCCGGCCGGCGCGCTGGTGG 1020
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ACGGCGCCCTGCACCCGCTGGCGTACCGGCCCTTCACGTACCAGGCCTACTACGACGAAT 1080
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      TCTGGAACATGGGCCTCCAGTCCGCCAGCTGCTTAGACCGGTTCCGGCCTAACGATCAGG 1140
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CCGTCTGATTATGGTCCATAAACTTTTCTTGAAAAAGGAAAAGATTGTGATCCATAAACA 1200
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      GGCCATGCAAAATATATCCTTACATCCGATGCGACGTGTTATACCACTAAAAAAGGTGCT 1260
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      CCTCTACCCTAGCTTTCTCGAAAAAAATAAAACAAAGTGGAGCACTACCAATCTAGATCT 1320
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ATGTGACGCTAAACAATAGACATGTGAGTGAAATATGTTTTGACTGATAACTCAGTCCAT 1380
consensus_12761#1      ------------------------------------------------------------
                                                                                   

consensus_12761#0      ATATACATAGCATCCAGGCACTTCCGCAGATGTTACTGATGTGCTCTTTTTTTTTTTAAG 1440
consensus_12761#1      --------------------------------------------------------NGAA 4
                                                                                 * 

consensus_12761#0      ATGATGGAACAAAAATCACAGTCTCTGCATTTGCTCATGTGGAGGAAGTCGCAAATCACC 1500
consensus_12761#1      GTGG-GAAAGNTCCGCCAAAATCCNCCCTTTTAC---CGGGAAGGCAACCTTGGAAATTC 60
                        **  * **       ** * **    * *** *    * * *** *  *    *    *

consensus_12761#0      TTTACGGAGCACTGAATCTTTCTGCAAAATCTTTGCATGTCAACGTAGCGTC--AATCTC 1558
consensus_12761#1      CTTTCCTGGCAAAAAATNCTTTCG-GCAATTGTTCCAAACCGGTTAGGCGTTCAAATCTC 119
                        ** *   ***   ***  **  *   ***  ** **   *      ****   ******

consensus_12761#0      AAAATATATTGTTCCAATTTTT-ATAGATACTTATCTCGAGATAGAATATGTGTTTATAG 1617
consensus_12761#1      AAAATATATTGTTTCAATTTNTTGTAGATACTTATCTCGAGATAGAATATGTGTTTATAG 179
                       ************* ****** *  ************************************

consensus_12761#0      TAGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAA 1677
consensus_12761#1      TTGTAAGTGTGCGTGTATTTATAGGCGTTTGTGTTGTACTGTGTTTAGCAATAATAAAAA 239
                       * **********************************************************

consensus_12761#0      AAAACATCTTGTAAAGAGCTGTTGCTCGCAAAAAAAAGA--------------------- 1716
consensus_12761#1      AAAACATCTTGTAAAGAGCTGTTGCTCGGCAAGTTCATATCTATTTTTTCTCTAGGGCCT 299
                       ****************************  **    * *                     

consensus_12761#0      --------------
consensus_12761#1      GTTACCAAAAAAAA 313
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)