These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12767#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2402 fasta sequence [AGCAGTCAAGCCGCGCACGCAGAGAGAGGCAGGCAAGGCAACGCAACGAAGGCGAAGCTGCCTGCCTCTGCCGCGCCGCGCCGCGCGAGATCTGGGCGGAAGGGAAGGCGCGGCGCGACGCGACGCACGAGAGAAACAAAAGGAAAAGGGAGGGGCGGGGGGGACAAAAACCTTCGCCGCACAAAGCGGTTACCGCGTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAACTACTACTTCTCTGGCAGTGGTAATCGTGGAACACCAGTCAAATTCAGGAACCCTAAGTACTTATCAATGCTTAACCACCTGAGGTTCTATATCCCAGAAATCTATCCAGAATTGCGTAAGGTCGTATTTCTTGATGATGACACTGTTGTCCAAAAGGACTTGTCGGAATTGTTTACCATCAACCTCAATGGAAATGTTATGGGAGCTGTAGAGACTTGCATGGAGACATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAATGTCTCACAAAGCATAA] [+] EMBL AK067760 [AGCAGTCAAGCCGCGCACGCAGAGAGAGGCAGGCAAGGCAACGCAACGAAGGCGAAGCTGCCTGCCTCTGCCGCGCCGCGCCGCGCGAGATCTGGGCGGAAGGGAAGGCGCGGCGCGACGCGACGCACGAGAGAAACAAAAGGAAAAGGGAGGGGCGGGGGGGACAAAAACCTTCGCCGCACAAAGCGGTTACCGCGTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAACTACTACTTCTCTGGCAGTGGTAATCGTGGAACACCAGTCAAATTCAGGAACCCTAAGTACTTATCAATGCTTAACCACCTGAGGTTCTATATCCCAGAAATCTATCCAGAATTGCGTAAGGTCGTATTTCTTGATGATGACACTGTTGTCCAAAAGGACTTGTCGGAATTGTTTACCATCAACCTCAATGGAAATGTTATGGGAGCTGTAGAGACTTGCATGGAGACATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGA ] [+] EMBL CB647322 [ GTTACCGCCTCCCCCCAGATCTCGTCGCCGTGCCGTGCCGTGCCCTGCCCTTGCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCACGATGCGGAGAACGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACGATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAACCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGG ] [+] EMBL BF430794 [ GCCCCGCTGGATACCGGCGGCGCACCGGCGCGGCCGCGCGATCCGATGAGGCGGCGGCCGTTCCTCGACCAGCGGCGGCCGTCGTCGTTCAAGCGCCGGTGGCAGCAGCGCCCGTGGTGGTTCCGCCTCGCGGTCACCCTCCTCCTCGCCCTCGCCTGCCTCTTCCTCCTGCTCGCGCTCCGGGGCTCGCCCGACCCCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGTAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTTAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCC AAGGGGCT ] [+] EMBL CB673761 [ CCGACCCGGTGGTGCTCCCCTCCACCGACTCGTCCAGATCCGCGGCCACCACCTCCCCTCTCCTCCATCAGAGATCTTACCTCGATGGCGTTACGGATGCGTTCAACATGACCGACGAAATGCTGAGTGCTCACTCGTTTTCAAGGCAGCTTATGGACCAGATTTCCCTTGCAAAAACCTACCTCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCAGCAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTGGAGTCCGGTTAACCATGGAATGGTTCAAGACAACTGAGCTCCAGAGGAAGTTTACTGAGAGGAGCCCAGCAGTACAGAGCAACCTAAGGGATAACAGCCTTTACCATTACTGTGTTTTCTCGGACAACATCCTTGCTGTTTCTGTTGTCGTCAATTCTACAACTCTAAATTCAATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTC ] [+] EMBL OSR18711A [ TCGTCGTTGCGAAGGAAGCCAATAACCTGCAGTTTGCAGCAGAGCTTAGCTCGCAGATACGGCGGGCGCAGAGCATCCTTGCGCATGCTGCAGCCCATGGTGGCACGGTGACGGAGCAGGATGCGGAGAAGGCAATTAGGGACATGTCGGTGTTGTTCTTCCAGGCGCACGAGTTCCGCTATGATAGTGCAGTTACAATCATGAAGTTGAAGGGTCAGATTCAATCCCTAGAGGAGAAATCGAAAGCTGAGGCGGAAAAGAGCACCAAGTATGGGCAGATTGCTGCCGAGGAGCTTCCAAAGGGGCTTTACTGCCTTNGAGTCCGGTTAACCATGGAATNGTTCAAGACAACTGAG ] [+] EMBL CA999625 [ AATGCGCCCTGAAAAGATTGTTTTTCACTTGGTGACTGACGAGGTGAATTATGCTCCCATGAGGGCGTGGTTCGCCCTGAATGATTACAGAGGAGCCACTGTGGAGATTCAAAAGGTAGAGGATTTCACTTGGCTCAATTCATCGTATGTTCCTGTTCTTAAACAGCTCCAGGATGCTGCCACCCAGAAC ] [-] EMBL CB673762 [ CATTTCACAGGTTCCATAAGTATCTTAACCATTCCCATCCTCTAATCCGTGCTCATTTTGATCCTGATGCCTGTGGCTGGGCATTTGGTATGAATGTTCTTGATCTTGTGATGTGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAG ] [-] EMBL CB647323 [ GAATGTTCTTGATCTTGTGATGGGGAGGAATAAGAATGTGACAGGTATATATCATTACTGGCAAGAGCGCAATGCTGATCATACCCTATGGAAGCTTGGATCTTTACCACCTGGTCTTCTTGCTTTCTATGGCTTGGTTGAGCCATTGGACCCCAAATGGCATGTCTTGGGACTGGGCTACACAACAGTGGATCCCGCTACTATCAAAGAAGGTGCAGTGTTGCATTACAATGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTTTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATGTATATTTATTGGAT ] [+] EMBL CA767153 [ agggGGAAATATGAAGCCATGGCTAAAAATTGGGATGGAGAAGTACAAGGGCTTCTGGGATAACTATGTAGACTATTCACACCCTCTGCTTCAGCGGTGCTTCACGCACTAATGAATGTGTATCAACATTAGAATTTTTTGTAAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGCAAAGCTTATTGTTTAAATGTCTCACAAAGCATAA] [+] EMBL AU173249 [ GAATGTGTATCAACATTAGAATTTTTTGTGAACTTCCTAGTGGAAATGCTTCAATGCCTTACTCAACAGCCACACGTGAACACAGTAACAGAACTGATTAACTTTGTCCTGAAATTACATCCTCAGATTAGACATGGGCGGCCGTTTATACTACCTGTAGTTGATGAAGTACAGCAACCACAGATGTGACTGGCACAGGTAAACATCAGAAAGAGCCAAGATTGCCATGGATTAGGCTGTTATTTGAGCAGCGTCCATTATATACATTCATAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTTGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAAaa ] [+] EMBL AU161614 [ acggcnCACCGTCCATTATANACATCCANAACTCGCAACCACCAATGTAATTTTTTCAATTTTGATTTTTNGGGTGAGAAAATTGAGGGCATAATTGTAGATTTGATTTAAAATTCTTGTGGTGTCACAGCAAGTTTTGAGATATATATATTTATTGGATGTTCAGAGTAAAGCTTATTGTTTAAATGTCTCACAAAGCAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||