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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12770#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1611 fasta sequence
[CCAAGAGAGGCGAAGGGCGCAACGCAACGCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGG-GGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGGGTTGGGAGGAGGAGGAGGAGGAGGAGGGCCCGACGGCGGCTCCTCTCGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG-ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC-TTTGGAGCAGCTTCAG-ACTCAAAA-GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT-CAGCATGGTGCTCCAA-TAACTAATGAGAGGGG-CAAAA-CAGCCG-TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT-AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG-GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT-GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA]
[+] EMBL AK070857 [CCAAGAGAGGCGAAGGGCGCAACGCAACGCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGG GGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGGGTTGGGAGGAGGAGGAGGAGGAGGAGGGCCCGACGGCGGCTCCTCTCGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA]
[+] EMBL CB638862 [ GCGAACCCCTCCTTCCCCCGTCGCGCCCAACCCTAACCCGCCTCCCCTCCACGTAGATCCAATCCCGCCGCCACCGCCGAACCCTAGCCCGCCCCACCTCCCTCCCCGCCGCCGCCGGAGGCGCGCGCGCGCGCGATCGGCGTCCTCCCGCCGCCGCGTTCGTGCGGGGTGGG ]
[+] EMBL CB632983 [ CGAGACGGGGGCCATGGAGGCGGACGGTGCCGCGGCTGCGGCGGCGGCGGGGGAGGCGAGCACGGAGGCCGGCGCGAGGCCCCTGGCGCCAGAGGAGGAGGCGCTGCGGCGCAACACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCATCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATA ]
[+] EMBL CB632794 [ GGAGGCCGGCGCGAGGCCCCCGGCGCCAGTGGTGGTGGCGCCGCGGCGCAACACCGACCGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAGAATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAGAACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAAAAAGTAAAAAGTAGTACGCCAGCAGCACTT AAGG ]
[+] EMBL AU108129 [ ACCGACTGCGTCTACTTCCTCGCCTCGCCCCTCACATGCAAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTTAAAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGNACCAT ]
[+] EMBL CB649585 [ AAGAAGGGGAACGAATGTGATTTTCGTCACAGTGATAATGCTCGTATGAACCCTAGAGACTGCTGGTACTGGTTAAATAGCAATTGCTTGAATCCAAAATGTCCGTTTCGCCATCCGCCAATTGATGGTATGTTTGGTGCTCCAACTACTGGAATGCCTGCAGTTTCTTCACACTACGCTCCATTTAACTCTGGAAAGCAGTTGGTTCCATGCTATTACTTTAAAAAGGGAAACTGCTTGAAAGGTGACAG ATGCGCATTTTATCATGGACCACAATCAGTGGGAAATAATCCATCAGAACAGGTGGTAAAAGTTTCTTCCTTACC TTTGGAGCAGCTTCAG ACTCAAAA GAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAAGAGATATGTATCCAGTGGAAGATTA ]
[+] EMBL AU108128 [ AAAGTTTCTTCCTTACCTTTTGGAGCAGCTTCAG ACTCAAAAGGAATGATTTGTTGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATTCCAGCATGGTGCTCCAATTAACTAATGAGAGGGGNCAAAACCAGCCGTTTGATCGGTCAACGNTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCAT ]
[-] EMBL CB649586 [ G ACTCAAAA GAATGATTTGTGGGGCATTAAAGATTCTGTGCAGTCTACTAATTCCATT CAGCATGGTGCTCCAA TAACTAATGAGAGGGG CAAAA CAGCCG TTGATCGGTCAACGGTTAATTCTGCCAGGACAGCTACAGTTGCAATACCGGTTGCTTCCAATGCAATGTCTTGTCCTAAGTCAGAGAAGGTAAAAAGTAGTACGCCAGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCA ]
[-] EMBL CB638863 [ AGCAGCACTT AAGGAAAGCTTCACTACTTCTTCAGGTGGGGATCATCCTGAGTGCTACCAGAACCATTTTCCAATGGATAGTGATCCTGTGCGAGATTGGAACCAAAGTTATGAAATGCCCCCTGCAGATGATCTGCCCCAGAACAGTAGGGAGGCTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATC ]
[-] EMBL CB675443 [ CCAGAGCAGTAGGGAGGGTGATGAACTTTTGGGTGAATCTTCACCAGGTTTTGATGTTCTCGTGGACAATGATGCAGATG GTGCTGCTTATTTACATGATGAAGATTTTGGAGGCGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCTGGATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTGCGAGAGAAAACGGCGTAGATCATTTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGGCCGTGTCGAGATGGATGGATCGGATT ]
[+] EMBL CB677255 [ AGATGCGTGCTGCTTATTTACATGATGAAGATTTTGGAGGAGATATGTATCCAGTGGAAGATTATGAATATGCTCCAGCT GATTTTGATGTTCGTGCACATCATGAAAGAGAGCGGTTCAATGGTATGGATGAGCAAGACCAGATGGGACATATGTATGATGGCTACGAGAGAAAACGGCGTAGATCATCTGAGAGGAGCATGGAACGGCCTTTCCACTCAGAAAGAAGGTTTCTGCAAAGAGATAGAGACCGTGTCGAGATGGATGGATCGGATTTACGTCATCGGCTCCGTAGGAGAAGAATAAATGAGTCTTCATTGGCAATTAGTCCAGAACGCAATGGAGAGCAACGGCGGAGGGATGAGCGCTACAGGGAAAGGGCACATGGTCACCGTTCACACAGGGATCATCACCAGAGCTCTCGAGGAAGCACTCTTAGCTCTCGTCTGCA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||