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Oryza sativa
cluster # 12781 cluster # 12781       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12781#0 length = 1356 sequences # 10  
consensus_12781#1 length = 438 sequences # 1  

consensusID : consensus_12781#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1356
fasta sequence
                              [AAAGAAAACGCCAAATCGCCCAAAACCCTAGACTCGGGCAGGGCTCACCTTCCTCCTCCTCCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAATGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTCCGATCCGCTGGCGCCTGCCGTTCTGTT-CCCAAATCGTCACGGTGACGCTGAGGCGGCGGTTTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCCCTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGGGGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCAGTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTGACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATG-ATAGTTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATAT--CCCCA-CAGATGGGGAAGCAGGTTGT-CGCGTTTCTTGCTG-CCATGGAAAT-CATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG-AAAAAAAAAGTTTATCTCGAATGAATAATGAAGATGACTTCGTTTTAAAAAAAAAAAGAAGGGAAA]

[+] EMBL CF329591             [AAAGAAAACGCCAAATCGCCCAAAACCCTAGACTCGGGCAGGGCTCACCTTCCTCCTCCTCCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAATGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTCCGATCCGCTGGCACCTGCCGTTCTGTT CCCAAATCGTCACGGTGACGCTGAGGCGGCGGTTTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCCCTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGGGGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCAGTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTGACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATGAATAGTTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK065673             [                                               CCTTCCTCCTCCTCCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAATGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTCCGATCCGCTGGCGCCTGCCGTTCTGTT CCCAAATCGTCACGGTGACGCTGAGGCGGCGGTTTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCCCTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGGGGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCAGTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTGACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATG ATAGTTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATAT  CCCCA CAGATGGGGAAGCAGGTTGT CGCGTTTCTTGCTG CCATGGAAAT CATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG AAAAAAAAAGTTTATCTCGAATGAATAATGAAGATGACTTCGTTTTAAAAAAAta           ]
[+] EMBL CB658935             [                                                         CCTCCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAATGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTCCGATCCGCTGGCGCCTGCCGTTCTGTT CCCAAATCGTCACGGTGACGCTGAGGCGGCGGTTTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCCCTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGGGGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCAGTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTGACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATG ATAGTTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATAT  CCCCA CAGATGGGGAAGCAGGTTGT CGCGTTTCTTGCTG CCATGGAAAT CATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C26152               [                                                                                       TCCGGCTACCAATATCCCAGAAACCTACCCAAATGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGANCTGAGGTCCGATCCGCTGGCG CTGCCGTTCTGTTCCCCAAATCGTCACGGTGACGCTGAGGCGGCGGTTTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCCCTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGGGGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCAGTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGNAATTTATATTCGTGACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGA TACCCAGATATG ATAGTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB658936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATAT  CCCCA CAGATGGGGAAGCAGGTTGT CGCGTTTCTTGCTG CCATGGAAAT CATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG AAAAAAAAAGTTTATCTCGAATGAATAATGAAGATGACTTCGTTTTAAGAAATAAAAGAAGGG   ]
[+] EMBL AU108885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGGACGCAAACGTGTNTGCTGTGATAN  CCCCACCAGATGGGGAAGCAGGTTGT CGCGTTTCTTGCTGCCCATGGAAATCCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTNACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACNGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCNTAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAA AAA                                                               ]
[+] EMBL AU100669             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTGTATGCTGTGATATCCCCCCA CAGATGGGGAAGCAGGTTGTCCGCGTTTCTTNCTG CCATGGAAAT CATGNCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAGAAAAAAAAAAGTTTATCTCGAATGAATAATGAAGATGA TTCGTTTTAAAAAAAAAAAAAAaaaaaa]
[+] EMBL CB685534             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTCCCCTAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG AAAAAAAAAGTTTATC                                                  ]
[+] EMBL CB685625             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTCCTCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG AAAAAAAAAGTTTATC                                                  ]
[-] EMBL CF329592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCATTTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGTAGTACCGTCGGATAGTAGTTTCCTCAGGAG AAAAAAAAAGTTTATCTCGAATGAATAATGAAGATGACTTCGTTTTAAAAAA              ]


>consensus_12781#0 AAAGAAAACGCCAAATCGCCCAAAACCCTAGACTCGGGCAGGGCTCACCTTCCTCCTCCT CCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAA TGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTC CGATCCGCTGGCGCCTGCCGTTCTGTTCCCAAATCGTCACGGTGACGCTGAGGCGGCGGT TTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCC CTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGG GGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCA GTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTG ACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATGATAG TTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCTGAGCTTTACTGTAAACTTG GATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTG AGGACGCAAACGTGTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTC TTGCTGCCATGGAAATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAG AGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTA TCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGG ATCCTCAGGAACAGCTTACATTGGTTGGTGTCCCAGAAGAACATCTTTCTGGTCACGCAT TTCACATGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACAATG TATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATAAAA AGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGGGCA ACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAACTCA GATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAATTGT AGTACCGTCGGATAGTAGTTTCCTCAGGAGAAAAAAAAAGTTTATCTCGAATGAATAATG AAGATGACTTCGTTTTAAAAAAAAAAAGAAGGGAAA



consensusID : consensus_12781#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 438
fasta sequence
                              [GNANTNGTNTNNTNTAANTGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTCTTGCTGCCATGGAAATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGGATCCTCAGGAACAGCTTACATTNGGTTTGTGTNCCAGAAGAACATCTTTCTNGTCACGCATTTCACAATGTACCATCTCACTTCACCCGGA]

[+] EMBL C27393               [GNANTNGTNTNNTNTAANTGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGTGTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTCTTGCTGCCATGGAAATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCAAAGCTGTTATCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGGATCCTCAGGAACAGCTTACATTNGGTTTGTGTNCCAGAAGAACATCTTTCTNGTCACGCATTTCACAATGTACCATCTCACTTCACCCGGA]


>consensus_12781#1 GNANTNGTNTNNTNTAANTGCTAATGCTGAGCTTTACTGTAAACTTGGATTGCCATTTGT TATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTGAGGACGCAAACGT GTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTCTTGCTGCCATGGA AATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAGAGGTCATGGAGTC TCATCAAGCTACAAAATTGGACATTTCTGGCACGGCAAAGCTGTTATCTCTTGCTTTCAG AAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGGGATCCTCAGGAACA GCTTACATTNGGTTTGTGTNCCAGAAGAACATCTTTCTNGTCACGCATTTCACAATGTAC CATCTCACTTCACCCGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12781#0      AAAGAAAACGCCAAATCGCCCAAAACCCTAGACTCGGGCAGGGCTCACCTTCCTCCTCCT 60
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      CCTTCGCCGCCGCTCTACGTCCTCTCCTCCGGCTACCAATATCCCAGAAACCTACCCAAA 120
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      TGCTCGCCTCCACCTTTGCCACGCACCCTGCTGCCGCTGCAGCCGCCAGGCGACGAGGTC 180
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      CGATCCGCTGGCGCCTGCCGTTCTGTTCCCAAATCGTCACGGTGACGCTGAGGCGGCGGT 240
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      TTCCAATGGCGAGGCTTTCGATCACGAACGCCCTCGCTAGCCAGAGCCTCGAGAGTGCCC 300
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      CTGCGGCGCCTCCCAAGCACTCGTTCCCGATACTGGTGAATAGTTGTACTGGGAAAATGG 360
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      GGAAGGCTGTTGCTGAAGCAGCTGTATCTGCTGGTCTTCAGTTAGTTCCTGTATCATTCA 420
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      GTGCTATTGAGGTTCCTGATGGAAAGGTTGAAATTTGTGATAGGGAAATTTATATTCGTG 480
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      ACCCATCTGAAGGAGAAAGTATTCTCCCTTCGATTGCTAAGGATTACCCAGATATGATAG 540
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      TTGTTGACTACACTGTTCCTGATGCTGTTAATGCTAATGCTGAGCTTTACTGTAAACTTG 600
consensus_12781#1      ------------GNANTNGTN-TNNTNTAANTGCTAATGCTGAGCTTTACTGTAAACTTG 47
                                       *  *  *  * * * *****************************

consensus_12781#0      GATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTG 660
consensus_12781#1      GATTGCCATTTGTTATGGGCACAACAGGTGGAAATAGGCAACTGTTGCACAAAACAGTTG 107
                       ************************************************************

consensus_12781#0      AGGACGCAAACGTGTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTC 720
consensus_12781#1      AGGACGCAAACGTGTATGCTGTGATATCCCCACAGATGGGGAAGCAGGTTGTCGCGTTTC 167
                       ************************************************************

consensus_12781#0      TTGCTGCCATGGAAATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAG 780
consensus_12781#1      TTGCTGCCATGGAAATCATGGCAGAGCAATTCCCCGGTGCATTTTCAGGTTACAAACTAG 227
                       ************************************************************

consensus_12781#0      AGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGCCAAAGCTGTTA 840
consensus_12781#1      AGGTCATGGAGTCTCATCAAGCTACAAAATTGGACATTTCTGGCACGGC-AAAGCTGTTA 286
                       ************************************************* **********

consensus_12781#0      TCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGG 900
consensus_12781#1      TCTCTTGCTTTCAGAAGTTGGGTGTGTCATTTAACTTGAACGAGGTTAAGCAGGTCCGGG 346
                       ************************************************************

consensus_12781#0      -ATCCTCAGGAACAGCTTACATTGG-TTGGTGTCCCAGAAGAACATCTTTCTGGTCACGC 958
consensus_12781#1      GATCCTCAGGAACAGCTTACATTNGGTTTGTGTNCCAGAAGAACATCTTTCTNGTCACGC 406
                        ********************** * ** **** ****************** *******

consensus_12781#0      ATTTCACA-TGTACCATCTCACTTCACCGGATGAGACAGTTTCATTTGAGTTTCAACACA 1017
consensus_12781#1      ATTTCACAATGTACCATCTCACTTCACCCGGA---------------------------- 438
                       ******** ******************* *                              

consensus_12781#0      ATGTATGTGGCCGTTCAATTTACGCAGAGGGAACTGTGGATGCTGCCCTGTTTCTCCATA 1077
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      AAAAGATACAATCTGGTGCCAACAAGAAATTATATGATATGATTGATGTCCTAAGAGAGG 1137
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      GCAACATGAGATGATCCTCTGTTGGTGTTATACGTGGTTATGTAACACCGATCTGTAAAC 1197
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      TCAGATGCGCACCAAAATTAGGCGACTACTAAGATTTACCAATTTTCTATTGTAACAAAT 1257
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      TGTAGTACCGTCGGATAGTAGTTTCCTCAGGAGAAAAAAAAAGTTTATCTCGAATGAATA 1317
consensus_12781#1      ------------------------------------------------------------
                                                                                   

consensus_12781#0      ATGAAGATGACTTCGTTTTAAAAAAAAAAAGAAGGGAAA 1356
consensus_12781#1      ---------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)