cluster # 12785

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Oryza sativa
cluster # 12785 cluster # 12785 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12785#0 length = 1209 sequences # 11
consensusID : consensus_12785#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1209
fasta sequence
                              [ATTTCCTCATTTGCCTTTCAGTTTTTCCCTTTTTCCCTGTAGTACAGTATTTTCCGAACAGTTGAGAAGTAGTAGCAAAACGATAGAATATGGCGGCGACCTTCTCCGCCGCCGCCGCCGCCGCCGCAA-GCCCCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCCCTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCCTCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC-TCT-GGTTGATAG-TTTTG-AGAAGGTGAATC-AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTATCAAGGCATATACAAGCAGTTAGTAGAGACATTGAGAAGCTTAGGTGTAGGAGTTGTGGAAACAGTTGGCAAGCCATTTGATCCTTCGATTCATGAGGCTATCGCACGCGAGGAATCTCATCAGTTCAAGGCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACTATTTTTAAATGAATTTCTTTTCCCCTGTGCAAAAAATGTGATTTTATTTCTCCCACGAAAATGAGTGG]

[+] EMBL AK101973             [ATTTCCTCATTTGCCTTTCAGTTTTTCCCTTTTTCCCTGTAGTACAGTATTTTCCGAACAGTTGAGAAGTAGTAGCAAAACGATAGAATATGGCGGCGACCTTCTCCGCCGCCGCCGCCGCCGCCGCAA GCCCCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCCCTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCCTCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTCCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC TCT GGTTGATAG TTTTG AGAAGGTGAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTATCAAGGCATATACAAGCAGTTAGTAGAGACATTGAGAAGCTTAGGTGTAGGAGTTGTGGAAACAGTTGGCAAGCCATTTGATCCTTCGATTCATGAGGCTATCGCACGCGAGGAATCTCATCAGTTCAAGGCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACTATTTTTAAATGAATTTCTTT                                                ]
[+] EMBL AU101207             [                                                                                                  ACCTTCTCCGCCGCCGCCGCCGCCGCCGCAA GCCCCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCCCTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCCTCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAG CTGAAAA GAGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA752692             [                                                                                                     TTCTCCGCCGCCG GGCCGCCGCCGCAA GCCCCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCCCTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCCTCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGGTCAGAGTCTATTGAC TCTGGGTTGATAGTTTTTGAAGAAAG GAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTATCAAAG ATATCCAACCGGTAAGTAGAGACATTGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA752718             [                                                                                                     TTCTCCGCCGCCGCCGCCGCCGCCGCAAGGGGNCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCCCTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCCTCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGGTTACCT AAATATACAGGTGGATGTTGTTCAGAGTCTATTGACTTCT GGTTGATAG TTTTG AGAAAG GAATCAAAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA998111             [                                                                                                                                                                                                                                                                         CGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTGTTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC TCT GGTTGATAG TTTTG AGAAGGTGAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB680296             [                                                                                                                                                                                                                                                                                                                 gGGTGACTATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC TCT GGTTGATAG TTTTG AGAAGGTGAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTATCAAGGCATATACAAGCAGTTAGTAGAGACATTGAGAAGCTTAGGTGTAGGAGTTGTGGAAACAGTTGGCAAGCCATTTGATCCTTCGATTCATGAGGCTATCGCACGCGAGGAATCTCATCAGTTCAAGGCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGATATCCAACCGACAAAATCAGGANATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCA TTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTT CAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACT                                                                    ]
[+] EMBL C28419               [                                                                                                                                                                                                                                                                                                                           TTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC TCT GGTTGATAG TTTTG AGAAGGTGAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGCCGATTAGCACAAGCTATCAAGGCATATACAAGCAGTTAGTAG GGCATTGAGAAG TTAGGTG AGGAG TNTGG AACAGTT GCAAGCCATTTG TCCTcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB680297             [                                                                                                                                                                                                                                                                                                                                                                      TTCTAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATGNAGAAAGAAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGGACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGCGTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGAC TCT GGTTGATAG TTTTG AGAAGGTGAATC AAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTAGCACAAGCTATCAAGGCATATACAAGCAGTTAGTAGAGACATTGAGAAGCTTAGGTGTAGGAGTTGTGGAAACAGTTGGCAAGCCATTTGATCCTTCGATTCATGAGGCTATCGCACGCGAGGAATCTCATCAGTTCAAGGCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGGTACTATTTTTAAATGAATTTCTTTTCCCCTGgc                                       ]
[+] EMBL AU101208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGNTCTGGCACCCAGGAGACGAGCTCCCCNTCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGANAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACTATTTTTAAATGAATTTCTTTTCCCCTGTGCAAAAA                                 ]
[+] EMBL AK105181             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACTATTTTTAAATGAATTTCTTT                                                ]
[+] EMBL CB683503             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCGGGTTCCTTCTAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGGAGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCTGAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCAAGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGAAGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTACTATTTTTAAATGAATTTCTTTTCCCCTGTGCAATCAATGTGATTTTATTTCTCCCACGAAAATGAGTGG]




>consensus_12785#0
ATTTCCTCATTTGCCTTTCAGTTTTTCCCTTTTTCCCTGTAGTACAGTATTTTCCGAACA
GTTGAGAAGTAGTAGCAAAACGATAGAATATGGCGGCGACCTTCTCCGCCGCCGCCGCCG
CCGCCGCAAGCCCCACCTACCTCCACCGCCCCCGAACCCTAGCCCCACCCGCCTCAACCC
CTGCTCGCCTGAGCCCCAGCAGCAGCAGCAGGAGGCCGGCGACCCCCTCGCTGCTCTCCC
TCCGGCGCACCCATGCCGCGCCGCCGCCGCTCCGTGCCGCCGCCGCTGACCCCAAGGTTG
TTAATGGGGAAGATTTCCCCCCTATGAAGGACCTACTTCGTCTATACAAGAAAGCTTTTC
TAGATGGAAATGATGAGGCTCTTGGTGGAATTGAGAGTGCTATCATTGCCATTGAGAAAG
AAAGGAGTAACTCAGCTGCTCAGTATGAAAGTATTGCAACCGAAATTACTTCAGGGAAGG
ACAAGTTCCTCCGTATAAATGCTGATCTGGAGAATTTCCGGAAGCAGACTGAAAAGGAGC
GTGCTAGGTTTACCTCAAATATACAGGTGGATGTTGTTCAGAGTCTATTGACTCTGGTTG
ATAGTTTTGAGAAGGTGAATCAAGAGATCACCCCGGAGACTGATAAAGAGCAGACGATTA
GCACAAGCTATCAAGGCATATACAAGCAGTTAGTAGAGACATTGAGAAGCTTAGGTGTAG
GAGTTGTGGAAACAGTTGGCAAGCCATTTGATCCTTCGATTCATGAGGCTATCGCACGCG
AGGAATCTCATCAGTTCAAGGCTGGGATTGTCTCGCATGAAGTCAAACGCGGGTTCCTTC
TAAGGGAGAGGCTGCTAAGGCCTGCCACTGTGAAGGTCTCAACCGGCTCTGGCACCCAGG
AGACGAGCTCCCCATCTACAGAGAAGCCTGTGGAGGATAGCAAAGAAGATGCCGCTGTCT
GAATCTGCTGGAAACTGGAATCCTGGAAATCCAACCGACAAAATCAGGAAATCAGTAGCA
AGTTATAGCTAGAGCACCATTCTTTGGGAGCTCATTTTTTTTACTGTCCATACCATGCGA
AGGTTTTGTGTTCCAAATGGGTGTCTTTATGTGTACATTTTCATAGCGATTTCAAGCTAC
TATTTTTAAATGAATTTCTTTTCCCCTGTGCAAAAAATGTGATTTTATTTCTCCCACGAA
AATGAGTGG
clustalw multiple alignements is not computed in this case