cluster # 1280

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Oryza sativa
cluster # 1280 cluster # 1280 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1280#0 length = 736 sequences # 2

consensusID : consensus_1280#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 736
fasta sequence

                              [TTTTTTTNTGAGACTAATAACAGAAAAGATAAACAAATAAAAATNATATATGATTTTCCTT--GTGAGCTNTGAGACTAATAACAGAAAAGATAAATAAACAAATAAAAATNATATATGATTTTCCTTGTGAGCT-TTCTACTACAGAATAGTAATCACAGTGCCAGGGAACTGGGCTTTGTTAATACAGAGTGTAGCCATGGTCCTTCCCATCCCTGCGTAGGCCTGGTTTCTGAAATTGTGGTCAACCTTGCGCGTCGGATCGATGATCAGACGGTCGAGAGCGACCGTGCTCCGGAGTATCCGGTGCGCCAGCTCCAGCTGGCCACGGATGCCGTAGAACCCGGTCATGTAGACGGTCCTGAGCCGCTCGTGGAGACGAGCCGCCGGCGATGTCGCCGCCGCGTCCAAATCGGAGGTGTAGAATGGCGTATTCGCACAGTACATATGAAGTTCCAACTCTTCAAGAACAGGTGCCAGCTCTAGAAGGCATGCCAGTCGAAGTACCCCAGTGCTAGCTTTTGGGCATCCGTCAATATCTACGTTCAGGATCAGATGCCTCAGATTGGCAAACACTGAGCCACCTTTCATCAACAACGGTGCCTCAGTTCTGATCGCCATGCTTAGTGTGAGACGGTCACAAACATGAGGAAGAGCAACCGGAAGCTTGGTGCAGGCGTAGTCAAAGCCATCCGACGGCAGCAACAGCCCAACCGACGCCATCGACAAGTTGAACCAA]

[-] EMBL CA754179             [TTTTTTTNTGAGACTAATAACAGAAAAGATAAACAAATAAAAATNATATATGATTTTCCTT  GTGAGCTNTGAGACTAATAACAGAAAAGATAAATAAACAAATAAAAATNATATATGATTTTCCTTGTGAGCT TTCTACTACAGAATAGTAATCACAGTGCCAGGGAACTGGGCTTTGTTAATACAGAGTGTAGCCATGGTCCTTCCCATCCCTGCGTAGGCCTGGTTTCTGAAATTGTGGTCAACCTTGCGCGTCGGATCGATGATCAGACGGTCGAGAGCGACCGTGCTCCGGAGTATCCGGTGCGCCAGCTCCAGCTGGCCACGGATGCCGTAGAACCCGGTCATGTAGACGGTCCTGAGCCGCTCGTGGAGACGAGCCGCCGGCGATGTCGCCGCCGCGTCCAAATCGGAGGTGTAGAATGGCGTATTCGCACAGTACATATGAAGTTCCAACTCTTCAAGAACAGGTGCCAGCTCTAGAAGGCATGCCAGTCGAAGTACC                                                                                                                                                                                                                                       ]
[+] EMBL CB634003             [                                                 ATGATTTTCCTTGCGTGACAAATGAGACTAATAACAGAAAAGATAAATAAACAAATAAAAATTATATATGATTTTCCTTGTGAGCTCTCCTACTACAGAATAGTAATCACAGTGCCAGGGAACTGGGCTTTGTTAATACAGAGTGTAGCCATGGTCCTTCCCATCCCTGCGTAGGCCTGGTTTCTGAAATTGTGGTCAACCTTGCGCGTCGGATCGATGATCAGACGGTCGAGAGCGACCGTGCTCCGGAGTATCCGGTGCGCCAGCTCCAGCTGGCCACGGATGCCGTAGAACCCGGTCATGTAGACGGTCCTGAGCCGCTCGTGGAGACGAGCCGCCGGCGATGTCGCCGCCGCGTCCAAATCGGAGGTGTAGAATGGCGTATTCGCACAGTACATATGAAGTTCCAACTCTTCAAGAACAGGTGCCAGCTCTAGAAGGCATGCCAGTCGAAGTACCCCAGTGCTAGCTTTTGGGCATCCGTCAATATCTACGTTCAGGATCAGATGCCTCAGATTGGCAAACACTGAGCCACCTTTCATCAACAACGGTGCCTCAGTTCTGATCGCCATGCTTAGTGTGAGACGGTCACAAACATGAGGAAGAGCAACCGGAAGCTTGGTGCAGGCGTAGTCAAAGCCATCCGACGGCAGCAACAGCCCAACCGACGCCATCGACAAGTTGAACCAA]




>consensus_1280#0
TTTTTTTNTGAGACTAATAACAGAAAAGATAAACAAATAAAAATNATATATGATTTTCCT
TGTGAGCTNTGAGACTAATAACAGAAAAGATAAATAAACAAATAAAAATNATATATGATT
TTCCTTGTGAGCTTTCTACTACAGAATAGTAATCACAGTGCCAGGGAACTGGGCTTTGTT
AATACAGAGTGTAGCCATGGTCCTTCCCATCCCTGCGTAGGCCTGGTTTCTGAAATTGTG
GTCAACCTTGCGCGTCGGATCGATGATCAGACGGTCGAGAGCGACCGTGCTCCGGAGTAT
CCGGTGCGCCAGCTCCAGCTGGCCACGGATGCCGTAGAACCCGGTCATGTAGACGGTCCT
GAGCCGCTCGTGGAGACGAGCCGCCGGCGATGTCGCCGCCGCGTCCAAATCGGAGGTGTA
GAATGGCGTATTCGCACAGTACATATGAAGTTCCAACTCTTCAAGAACAGGTGCCAGCTC
TAGAAGGCATGCCAGTCGAAGTACCCCAGTGCTAGCTTTTGGGCATCCGTCAATATCTAC
GTTCAGGATCAGATGCCTCAGATTGGCAAACACTGAGCCACCTTTCATCAACAACGGTGC
CTCAGTTCTGATCGCCATGCTTAGTGTGAGACGGTCACAAACATGAGGAAGAGCAACCGG
AAGCTTGGTGCAGGCGTAGTCAAAGCCATCCGACGGCAGCAACAGCCCAACCGACGCCAT
CGACAAGTTGAACCAA

clustalw multiple alignements is not computed in this case