These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12807#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1779 fasta sequence [ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT-GGGTCAT-GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA-CAAGG-TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA-CTCGTCGTAACAGTTTTGAGCCTCCGAATG-AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK068732 [ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATAATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATGAAAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAA ] [+] EMBL AK099397 [ TTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCC ] [+] EMBL OSS10884A [ ACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTNAGAAAGCGAATNGCTNGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTNGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGNACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGNGGAACCNAAAAGCTTAATT GGGTCATGGGGGACTGTATACTTCAAGAATAGNGTACTACC ] [+] EMBL OSS11582A [ ACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGNCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGAGGAACTTGCTAATTGATGGCTGGATGATG AGATGTAGGACTTGCCATTCANGCGGGACCCGAAA NTTAATTNGGGT AT GGG ACTTTATACTTC AGGATAGAGTCTTACC ] [+] EMBL AU095777 [ AACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BQ906276 [ atTATACACCAAGGCTTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACCTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAA ] consensusID : consensus_12807#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 692 fasta sequence [CAAACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCGAAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCCATGATACTGGAGACAGCATGGTGAAGTCCCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTCCAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGAT-CCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACCCAAGGTTATGAACACAATCTCCCTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTTAACAGTTTTGAGCCTCCGAATG-AAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA] [-] EMBL CA763191 [CAAACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCGAAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCCATGATACTGGAGACAGCATGGTGAAGTCCCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTCCAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGAT CCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACCCAAGGTTATGAACACAATCTCCCTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA] [+] EMBL BI811497 [ acCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACACAAGGTTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTTGAGCCTCCGAATGAAAAAAAAAAGTTGTAATCTGTAATCTC ACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTC ATTGCCCGATCCATTTACATTCCaaaaaaa ] consensusID : consensus_12807#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence [TTCATGGGGNACTTGTATGTCCTGCCAAGAATAGGAGTACTACCCCATTGATGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACACCATGGGATATCGCGCAACTATTACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCATGGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGGCCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATACCACTGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTNCGAGCCTCCGAATGAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGACAGTCCCAGTACTACCCCCAATAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA] [+] EMBL BI807093 [TTCATGGGGNACTTGTATGTCCTGCCAAGAATAGGAGTACTACCCCATTGATGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACACCATGGGATATCGCGCAACTATTACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCATGGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGGCCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATACCACTGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTNCGAGCCTCCGAATGAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGACAGTCCCAGTACTACCCCCAATAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA] consensusID : consensus_12807#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [CATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAATCATCAGTTCTTCATATACCTTTTCAGGAGTTATGTCACATCTAGATATTAGCTCAGTTCAGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAGACTTCTGTTTACATTTTTTTACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGACAAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA] [+] EMBL OSS15426A [CATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAATCATCAGTTCTTCATATACCTTTTCAGGAGTTATGTCACATCTAGATATTAGCTCAGTTCAGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAGACTTCTGTTTACATTTTTTTACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGACAAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA] consensusID : consensus_12807#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 280 fasta sequence [GCCNAACTTGGTTTNNTCACCGGGGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTGAAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCAAAAAAAAA] [+] EMBL AU096772 [GCCNAACTTGGTTTNNTCACCGGGGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTGAAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12807#0 ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTC 60 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCG 120 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 CCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCC 180 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 TCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACG 240 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCG 300 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 ACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCT 360 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 ACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGG 420 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTG 480 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAG 540 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 CGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAA 600 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 ATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATG 660 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAA 720 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 TTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATG 780 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACAT 840 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 TTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCA 900 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAAT 960 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 TAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGC 1020 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTC 1080 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ------------------------------------------------------------ consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACG 1140 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ---------------------------------------------------------CAA 3 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGA 1200 consensus_12807#2 ------------------------------------------------------------ consensus_12807#1 ACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCG 63 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 AAAGCTTAATTGGGTCATGGGAACTGTATACTGC-AAGAATAG-AGTACTACC------A 1252 consensus_12807#2 -----TTCATGGGGNACTTG----TATGTCCTGCCAAGAATAGGAGTACTACCCCATTGA 51 consensus_12807#1 AAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCC------A 117 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 TGATACTGGAGACAGCATGGTGAAGTACC-ACAAGAAGTTCACAGCCATGGGATATCGCG 1311 consensus_12807#2 TGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACA-CCATGGGATATCGCG 110 consensus_12807#1 TGATACTGGAGACAGCATGGTGAAGTCCC-ACAAGAAGTTCACAGCCATGGGATATCGCG 176 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 CACTTATTTACAGTGGAGATCATGATCTCT--GTATTCCCTATGTCGGAACGGAA-GCAT 1368 consensus_12807#2 CAACTATT-ACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCAT 169 consensus_12807#1 CACTTATTTCCAGTGGAGATCATGATCTCT--GTATTCCCTATGTCGGAACGGAA-GCAT 233 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GGGTTAGATCCATGGGATACCGAGTAATTGATCA-TTGGCGACCA-TGGTACTTTGGAGG 1426 consensus_12807#2 GGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGG 229 consensus_12807#1 GGGTTAGATCCATGGGATACCGAGTAATTGATCA-TTGGCGACCA-TGGTACTTTGGAGG 291 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 ------------------------------------------------------------ consensus_12807#0 GCAAGTCGCTGGATATACACAAGGTTATGAACACAA-TCTCACTTTCCTCA-CCATAAAG 1484 consensus_12807#2 CCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAG 289 consensus_12807#1 GCAAGTCGCTGGATATACCCAAGGTTATGAACACAA-TCTCCCTTTCCTCA-CCATAAAG 349 consensus_12807#4 ------------------------------------------------------------ consensus_12807#3 --------------------------------------CATGATCTCTGTATTCCCTATG 22 consensus_12807#0 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCAC 1544 consensus_12807#2 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATA-CCAC 348 consensus_12807#1 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCAC 409 consensus_12807#4 ------------------------------------GCCNAACTTG-GTTTNNTCACCGG 23 consensus_12807#3 TCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCAT 82 * * * ** consensus_12807#0 TGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGT----AACAG-TTTT-G 1598 consensus_12807#2 TG-TTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGT----AACAG-TTTNCG 402 consensus_12807#1 TGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTT----AACAG--TTTTG 463 consensus_12807#4 GGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTG 83 consensus_12807#3 GGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAA--TCATC 140 * * * * * * * * * consensus_12807#0 AG--CCTCCGAATGAAAAA-AAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 1655 consensus_12807#2 AG--CCTCCGAATGAAAAA-AAAA-GTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 458 consensus_12807#1 AG--CCTCCGAATGAAAA--AAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 519 consensus_12807#4 AAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 143 consensus_12807#3 AG-TTCTTCATATACCTTTTCAGGAGTTATG---TCACATCTAGATAT-TAGCTCAGTTC 195 * * ** * *** * * **** * * ** *** * consensus_12807#0 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAA 1713 consensus_12807#2 A--TTTGTCCGTAATCTGCATCTAGGGATGTGA-CAGTCCCAGTACTACCCCCAATAAAA 515 consensus_12807#1 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAA 577 consensus_12807#4 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAA 201 consensus_12807#3 AGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAG 255 * ** * ** * * * * * ** * * * * ** * * ** consensus_12807#0 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAAAAAAAAAAAAAAAA 1772 consensus_12807#2 CCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA----------- 564 consensus_12807#1 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAATTGCCCGATCCATT 636 consensus_12807#4 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAATTGCCCGATCCATT 260 consensus_12807#3 ACTTCTGTTTACATTTTTT--TACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGAC 313 **** ** ** *** *** ** * *** *** * * consensus_12807#0 AAAAAAA------------------------------------------------- 1779 consensus_12807#2 -------------------------------------------------------- consensus_12807#1 TACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA 692 consensus_12807#4 TACATTCCTGCAAAAAAAAA------------------------------------ 280 consensus_12807#3 AAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA----------------- 352 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||