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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12807#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1779 fasta sequence
[ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT-GGGTCAT-GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA-CAAGG-TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA-CTCGTCGTAACAGTTTTGAGCCTCCGAATG-AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK068732 [ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATAATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATGAAAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAA ]
[+] EMBL AK099397 [ TTCCGATGCCTCGCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCGCCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCCTCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACGAGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCGACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCTACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGGAGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTGGTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAGCGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAAATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATGAAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAATTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATGGGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACATTTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCAAGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCC ]
[+] EMBL OSS10884A [ ACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTNAGAAAGCGAATNGCTNGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTNGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGNACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGNGGAACCNAAAAGCTTAATT GGGTCATGGGGGACTGTATACTTCAAGAATAGNGTACTACC ]
[+] EMBL OSS11582A [ ACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAATTAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGCGATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTCGTGGACGCATGACGATGTGGNCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGAGGAACTTGCTAATTGATGGCTGGATGATG AGATGTAGGACTTGCCATTCANGCGGGACCCGAAA NTTAATTNGGGT AT GGG ACTTTATACTTC AGGATAGAGTCTTACC ]
[+] EMBL AU095777 [ AACTTGGTGGTAGATCACTCCCCTGCACGAGCGACGAACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGAAAAGCTTAATT GGGTCAT GGGAACTGTATACTGCAAGAATAGAGTACTACCATGATACTGGAGACAGCATGGTGAAGTACCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACA CAAGG TTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAA CTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BQ906276 [ atTATACACCAAGGCTTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACCTCGTCGTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAAAAAA ]
consensusID : consensus_12807#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 692 fasta sequence
[CAAACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCGAAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCCATGATACTGGAGACAGCATGGTGAAGTCCCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTCCAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGAT-CCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACCCAAGGTTATGAACACAATCTCCCTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTTAACAGTTTTGAGCCTCCGAATG-AAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA]
[-] EMBL CA763191 [CAAACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCGAAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCCATGATACTGGAGACAGCATGGTGAAGTCCCACAAGAAGTTCACAGCCATGGGATATCGCGCACTTATTTCCAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGAT CCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACCCAAGGTTATGAACACAATCTCCCTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTTAACAGTTTTGAGCCTCCGAATG AAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA]
[+] EMBL BI811497 [ acCCATGGGATATCGCGCACTTATTTACAGTGGAGATCATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGATATACACAAGGTTATGAACACAATCTCACTTTCCTCACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCACTGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTTGAGCCTCCGAATGAAAAAAAAAAGTTGTAATCTGTAATCTC ACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTC ATTGCCCGATCCATTTACATTCCaaaaaaa ]
consensusID : consensus_12807#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence
[TTCATGGGGNACTTGTATGTCCTGCCAAGAATAGGAGTACTACCCCATTGATGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACACCATGGGATATCGCGCAACTATTACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCATGGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGGCCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATACCACTGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTNCGAGCCTCCGAATGAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGACAGTCCCAGTACTACCCCCAATAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA]
[+] EMBL BI807093 [TTCATGGGGNACTTGTATGTCCTGCCAAGAATAGGAGTACTACCCCATTGATGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACACCATGGGATATCGCGCAACTATTACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCATGGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGGCCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAGGGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATACCACTGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGTAACAGTTTNCGAGCCTCCGAATGAAAAAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGACAGTCCCAGTACTACCCCCAATAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA]
consensusID : consensus_12807#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence
[CATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAATCATCAGTTCTTCATATACCTTTTCAGGAGTTATGTCACATCTAGATATTAGCTCAGTTCAGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAGACTTCTGTTTACATTTTTTTACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGACAAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA]
[+] EMBL OSS15426A [CATGATCTCTGTATTCCCTATGTCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCATGGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAATCATCAGTTCTTCATATACCTTTTCAGGAGTTATGTCACATCTAGATATTAGCTCAGTTCAGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAGACTTCTGTTTACATTTTTTTACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGACAAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA]
consensusID : consensus_12807#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 280 fasta sequence
[GCCNAACTTGGTTTNNTCACCGGGGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTGAAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCAAAAAAAAA]
[+] EMBL AU096772 [GCCNAACTTGGTTTNNTCACCGGGGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTGAAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGCATTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAACCTTCCTGATAATTTATTTGCTACATGTGATAGCATAAAATTCAATTGCCCGATCCATTTACATTCCTGCAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12807#0 ACAAAGAGAAAACAAGGACCCATCGTCGCCTCGCCTAATCATCATCCTTTCCGATGCCTC 60
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GCACCGCCGCCGCCGCCGCCGCCGCGCCGCCGCCGCTGCTGCTGCTCTCCGCCGCAGCCG 120
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 CCATCGCCATCGCCATCGCCGTCGCCGTCGCGGCCCCCGACGGCCACCTAGTCGCCAGCC 180
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 TCCCGGGCTTCCATGGCGCCTTCCCCTCCAAGCACTACTCCGGGTACGTGACGGTGGACG 240
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AGGGGAGCGGGAGGCGGCTGTTCTACTACCTGGTGACGTCGGAGCGCGACGCGGCGGCCG 300
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 ACCCCGTCGTGCTCTGGCTCAACGGCGGCCCGGGATGCTCCAGCCTCGACGGCTTCGTCT 360
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 ACGAGAACGGCCCCTTCAATTTCGAGCGTGGCAGCGATCCGGGTGGCCTCCCAAATCTGG 420
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AGCTCAACCCCTACAGCTGGTCCAAGGTTTCCAACGTGGTGTACCTCGACTCCCCTGCTG 480
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GTGTTGGGATGTCGTACTCGTTGAATAAATCAGATTACACGACAGGTGACCTAAAAACAG 540
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 CGGCTGATGCACACACCTTCCTTCTGAAGTGGTTTGAGTTATACCCTGAGTTCCAGTCAA 600
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 ATCCGTTCTACATGTCGGGAGAGTCATTTGCAGGGATCTACATTCCAACACTAGCTGATG 660
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AAGTTGTAAAAGGGATAGAAAAGGATCTGAAGCCAAGAATCAATTTTAAGGGATATCTAA 720
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 TTGGCAATGGAGCAACTGATCAGGACTATGATTTCAATTCGTTTGTGCCGTTTGCACATG 780
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GGATGGGTCTCATCTCAACCGAATTGTTTGAGGATGCAAGTACTGCATGCCATGGTACAT 840
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 TTTGGGGCAAAGTTAATAATCTGTGCCAAGAAAAGATAGACAGAGTGCATTGGGAACTCA 900
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AGGACCTGAACAAGTACAACATCCTTGCTCCCTGCTACCATCACCCTGAAATTCAAGAAT 960
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 TAGAGTTCAAGAACAGCAGCTTGCCATCAAGTTTTAGAAAGCTAGGTGAGACAGAGAAGC 1020
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GATTTCCAGTGAGAAAGCGAATGGCTGGCCGCTCTTGGCCTCTCCGTGCTCCTGTGACTC 1080
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ------------------------------------------------------------
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GTGGACGCATGACGATGTGGCCTGAACTTGGTGGTAGATCACTCCCCTGCACGAGCGACG 1140
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ---------------------------------------------------------CAA 3
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AACTTGCTAATGCATGGCTGGATGATGAAGATGTAAGAGCTGCCATTCACGCGGAACCGA 1200
consensus_12807#2 ------------------------------------------------------------
consensus_12807#1 ACTTGCTAATGGCATGGCTGGATGATGAAGATGTAATAGGTTGCCATTCACACGGAACCG 63
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 AAAGCTTAATTGGGTCATGGGAACTGTATACTGC-AAGAATAG-AGTACTACC------A 1252
consensus_12807#2 -----TTCATGGGGNACTTG----TATGTCCTGCCAAGAATAGGAGTACTACCCCATTGA 51
consensus_12807#1 AAAAAACTTAATTGGGTCATGGGAGCTGTATACTGCAAGAATAGAGTACTCCC------A 117
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 TGATACTGGAGACAGCATGGTGAAGTACC-ACAAGAAGTTCACAGCCATGGGATATCGCG 1311
consensus_12807#2 TGACCTTGGAGACANCATGGTGAAGTACCCACAGAATGTTCACA-CCATGGGATATCGCG 110
consensus_12807#1 TGATACTGGAGACAGCATGGTGAAGTCCC-ACAAGAAGTTCACAGCCATGGGATATCGCG 176
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 CACTTATTTACAGTGGAGATCATGATCTCT--GTATTCCCTATGTCGGAACGGAA-GCAT 1368
consensus_12807#2 CAACTATT-ACAGTGGAGATCATGATCTGCTGGTATTCCCTATGTCGGAACGGAAANCAT 169
consensus_12807#1 CACTTATTTCCAGTGGAGATCATGATCTCT--GTATTCCCTATGTCGGAACGGAA-GCAT 233
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GGGTTAGATCCATGGGATACCGAGTAATTGATCA-TTGGCGACCA-TGGTACTTTGGAGG 1426
consensus_12807#2 GGGTTAGATCCATGGGATACCGAGTAATTGATCAATTGNCGACCAATGGTACTTTGGAGG 229
consensus_12807#1 GGGTTAGATCCATGGGATACCGAGTAATTGATCA-TTGGCGACCA-TGGTACTTTGGAGG 291
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 ------------------------------------------------------------
consensus_12807#0 GCAAGTCGCTGGATATACACAAGGTTATGAACACAA-TCTCACTTTCCTCA-CCATAAAG 1484
consensus_12807#2 CCAAGTCGCTGGATATACACAAGGTTATGAACACAAATCTCACTTTCCTCAACCATAAAG 289
consensus_12807#1 GCAAGTCGCTGGATATACCCAAGGTTATGAACACAA-TCTCCCTTTCCTCA-CCATAAAG 349
consensus_12807#4 ------------------------------------------------------------
consensus_12807#3 --------------------------------------CATGATCTCTGTATTCCCTATG 22
consensus_12807#0 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCAC 1544
consensus_12807#2 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATA-CCAC 348
consensus_12807#1 GGAGCTGGACACACTGTCCCGGAGTACAAGCCCAAGGAGACGCTTGCGTTCTATAGCCAC 409
consensus_12807#4 ------------------------------------GCCNAACTTG-GTTTNNTCACCGG 23
consensus_12807#3 TCGGAACGGAAGCATGGGTTAGATCCATGGGATACCGAGTAATTGATCATTGGCGACCAT 82
* * * **
consensus_12807#0 TGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGT----AACAG-TTTT-G 1598
consensus_12807#2 TG-TTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCGT----AACAG-TTTNCG 402
consensus_12807#1 TGGTTGTCCGGGAAGAAGATTTGACATCAAGATCAACTCGTCTT----AACAG--TTTTG 463
consensus_12807#4 GGAAAGGAAAGGATTTTGACCATTCAAAGGATTCAACTCGTTCCGTNAAACAGGTTTTTG 83
consensus_12807#3 GGTACTTTGGAGGGCAAGTCGCTGGGTATGTTCTCATCCTTTCTTCATAGGAA--TCATC 140
* * * * * * * * *
consensus_12807#0 AG--CCTCCGAATGAAAAA-AAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 1655
consensus_12807#2 AG--CCTCCGAATGAAAAA-AAAA-GTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 458
consensus_12807#1 AG--CCTCCGAATGAAAA--AAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 519
consensus_12807#4 AAGCCTCNCGAATGAAAATTAAAAAGTTGTAATCTGTAATCTCAACAGGCAGACAAGTGC 143
consensus_12807#3 AG-TTCTTCATATACCTTTTCAGGAGTTATG---TCACATCTAGATAT-TAGCTCAGTTC 195
* * ** * *** * * **** * * ** *** *
consensus_12807#0 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAA 1713
consensus_12807#2 A--TTTGTCCGTAATCTGCATCTAGGGATGTGA-CAGTCCCAGTACTACCCCCAATAAAA 515
consensus_12807#1 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAATCCCAGTACTACCCCCATAAAAA 577
consensus_12807#4 A--TTTGTCCGTAATCTGCATCTAGGGATGTGAGCAGTCCCAGTACTACCCCCATAAAAA 201
consensus_12807#3 AGCTTAACTCATACTTTTCTACCTAGAATTTTAGAAGTATATGTGCAGATTGTAGATAAG 255
* ** * ** * * * * * ** * * * * ** * * **
consensus_12807#0 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAAAAAAAAAAAAAAAA 1772
consensus_12807#2 CCTTCCTGATAATTTATTTGCTACATGTGATAGCCNCAAAATTCAAAAA----------- 564
consensus_12807#1 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAATTGCCCGATCCATT 636
consensus_12807#4 CCTTCCTGATAATTTATTTGCTACATGTGATAGC-ATAAAATTCAATTGCCCGATCCATT 260
consensus_12807#3 ACTTCTGTTTACATTTTTT--TACTTGAGGAAGCAAGAAATTAAGAGAGAATGTCTTGAC 313
**** ** ** *** *** ** * *** *** * *
consensus_12807#0 AAAAAAA------------------------------------------------- 1779
consensus_12807#2 --------------------------------------------------------
consensus_12807#1 TACATTCCTGCATGCACCGTTGTCGCATTGAAGATGGTAAAAAAAAAAAAAAAAAA 692
consensus_12807#4 TACATTCCTGCAAAAAAAAA------------------------------------ 280
consensus_12807#3 AAGNTTTCCTCACTAGAGCGATATTTGCCATTGCAGATA----------------- 352
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||