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Oryza sativa
cluster # 1282 cluster # 1282       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1282#0 length = 1812 sequences # 2  

consensusID : consensus_1282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1812
fasta sequence
                              [TTAAGGCATTTCACATGGTAAGCCGATCCTAAGGGACGGGTAACCCCGGCAAGAAGAACACCACNCGCGTGCCCGAAAGGAATCGGGTTAAGATTTCCGAGCCGGGACGTGGCGGTTGACGGCGACGTTAGGAAGTCCGGAGACGNCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGCTTAACGGCCCGCCAACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGNAAGGTAGGACCACGTCGCGCGGTGTCCGGNTGCCCCCGNTGGCCCTTGAAAATCCGNAGNACCNAGTACCGTCCACGCCNGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGATACANTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCGGCCCCGAACCCGTCGGCTGCCAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTCGCGGATGCTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACCTAAAGAAAGAAATAAAAAGAAGGATGTGGTTCTCTTGGATGATGAAGATATGGAACCTGCTAAATCAATTAATGTTGAAATGGCTCATAAATGGGATGAGTCAAAGATTTACTATCCTTCAAGGACTGATCTCGAAACTTTTGAGCTGATCTGCTCTGATATAGAATGCCTTGAGCCTGAAGAATATTTGAAATCACCTGTTATAAACTTTTATATGCAGTACCTCAGGAAATCTAGAACATGTGGAGACTTGTACATTTTCAATACATATTTCTATAGCAAACTTGAAGAAGTACTATCCAGGATGGGTGACCATGATGATTCACAATTCAGCAAGTTAAGGAGGTGGTGGAAACATATAGATATATTTAGACAACCGTACATAATTCTGCCTATTCATGGAGAGATGCACTGGAGCTTGATAATTATCTGCATGCCTGCAAAAGAAACAGAATCTGGGCCGATAATACTTCACTTGGACTCTCTAGGACTCCATTCCAGTCGTGAAGTTTTTTATGTTATTGAGAGCTTCCTCATAGCAGAATGGCAACATCTACAGAATGATTCTTCTTATACTATCCCCTTTTCAGGGAGAATATGGAATCATCTATCAAAAAATATAAACAAGGAAAAAGTTCAGGTGCCAAGTCAGCGTAATAAGTATGACTGTGGTATCTTTATGCTTCATTACATTGAGAGGTTTATTCAAGAGGCACCAGAGAGGCTGACAAGAGAGAACCTTTGCATGTTTGGACGGAAATGGTTCGATCCCAAGGAAACTTCTGGGCTGCGGGACAGAATTCGGGCACTAATGTTTGATGCATTTGAGAGTGCTCGGATGGATGATGAATCGTCGCAGTCCGAGTCACATTCTGATGATCAATCTGGAGATGAAGATAAAGACAGGGATGGAGTCATGGTTGTGGTGATTGACTAACGATGGATGAATGGCACCTAGCTTTACATTATGTGATGGTACAGTTTCAGGCTTTCAGCAATATCGGCTCTCAAATGTCACGCTGTTTATTAGCTGAAAAATGTCTGTGCTGCTCTGGAGACTGTACTAGAAAAGGATGCGCCAGTGGTGCTTAGCGATGCAATTATAAAGTACTACACAACGCACATTTCTTGTAGCCTGGTAGTTTATGGGGTTTCAAGATGAAAGTTTAGCGTT]

[-] EMBL AU100874             [TTAAGGCATTTCACATGGTAAGCCGATCCTAAGGGACGGGTAACCCCGGCAAGAAGAACACCACNCGCGTGCCCGAAAGGAATCGGGTTAAGATTTCCGAGCCGGGACGTGGCGGTTGACGGCGACGTTAGGAAGTCCGGAGACGNCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGCTTAACGGCCCGCCAACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGNAAGGTAGGACCACGTCGCGCGGTGTCCGGNTGCCCCCGNTGGCCCTTGAAAATCCGNAGNACCNAGTACCGTCCACGCCNGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGATACANTCTGGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK064546             [                                                                                                                                                                                                                                                                                                                                                                        GGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGAAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCGGCCCCGAACCCGTCGGCTGCCAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTCGCGGATGCTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACCTAAAGAAAGAAATAAAAAGAAGGATGTGGTTCTCTTGGATGATGAAGATATGGAACCTGCTAAATCAATTAATGTTGAAATGGCTCATAAATGGGATGAGTCAAAGATTTACTATCCTTCAAGGACTGATCTCGAAACTTTTGAGCTGATCTGCTCTGATATAGAATGCCTTGAGCCTGAAGAATATTTGAAATCACCTGTTATAAACTTTTATATGCAGTACCTCAGGAAATCTAGAACATGTGGAGACTTGTACATTTTCAATACATATTTCTATAGCAAACTTGAAGAAGTACTATCCAGGATGGGTGACCATGATGATTCACAATTCAGCAAGTTAAGGAGGTGGTGGAAACATATAGATATATTTAGACAACCGTACATAATTCTGCCTATTCATGGAGAGATGCACTGGAGCTTGATAATTATCTGCATGCCTGCAAAAGAAACAGAATCTGGGCCGATAATACTTCACTTGGACTCTCTAGGACTCCATTCCAGTCGTGAAGTTTTTTATGTTATTGAGAGCTTCCTCATAGCAGAATGGCAACATCTACAGAATGATTCTTCTTATACTATCCCCTTTTCAGGGAGAATATGGAATCATCTATCAAAAAATATAAACAAGGAAAAAGTTCAGGTGCCAAGTCAGCGTAATAAGTATGACTGTGGTATCTTTATGCTTCATTACATTGAGAGGTTTATTCAAGAGGCACCAGAGAGGCTGACAAGAGAGAACCTTTGCATGTTTGGACGGAAATGGTTCGATCCCAAGGAAACTTCTGGGCTGCGGGACAGAATTCGGGCACTAATGTTTGATGCATTTGAGAGTGCTCGGATGGATGATGAATCGTCGCAGTCCGAGTCACATTCTGATGATCAATCTGGAGATGAAGATAAAGACAGGGATGGAGTCATGGTTGTGGTGATTGACTAACGATGGATGAATGGCACCTAGCTTTACATTATGTGATGGTACAGTTTCAGGCTTTCAGCAATATCGGCTCTCAAATGTCACGCTGTTTATTAGCTGAAAAATGTCTGTGCTGCTCTGGAGACTGTACTAGAAAAGGATGCGCCAGTGGTGCTTAGCGATGCAATTATAAAGTACTACACAACGCACATTTCTTGTAGCCTGGTAGTTTATGGGGTTTCAAGATGAAAGTTTAGCGTT]


>consensus_1282#0 TTAAGGCATTTCACATGGTAAGCCGATCCTAAGGGACGGGTAACCCCGGCAAGAAGAACA CCACNCGCGTGCCCGAAAGGAATCGGGTTAAGATTTCCGAGCCGGGACGTGGCGGTTGAC GGCGACGTTAGGAAGTCCGGAGACGNCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGC TTAACGGCCCGCCAACCCTGGAAACGGTTCAGCCGGAGGTAGGGTCCAGCGGCCGNAAGG TAGGACCACGTCGCGCGGTGTCCGGNTGCCCCCGNTGGCCCTTGAAAATCCGNAGNACCN AGTACCGTCCACGCCNGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGATACANTCT GGCCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAACGGATCCGTAACTTCGGGAAAA GGATTGGCTCTGAGGGCTGGGCTCGGGGGTCCCGGCCCCGAACCCGTCGGCTGCCAGCCG ACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGAT GGTCCTCGCGGATGCTGACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAA GAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACCTAAAGAAAGAAATAAAAAGAAG GATGTGGTTCTCTTGGATGATGAAGATATGGAACCTGCTAAATCAATTAATGTTGAAATG GCTCATAAATGGGATGAGTCAAAGATTTACTATCCTTCAAGGACTGATCTCGAAACTTTT GAGCTGATCTGCTCTGATATAGAATGCCTTGAGCCTGAAGAATATTTGAAATCACCTGTT ATAAACTTTTATATGCAGTACCTCAGGAAATCTAGAACATGTGGAGACTTGTACATTTTC AATACATATTTCTATAGCAAACTTGAAGAAGTACTATCCAGGATGGGTGACCATGATGAT TCACAATTCAGCAAGTTAAGGAGGTGGTGGAAACATATAGATATATTTAGACAACCGTAC ATAATTCTGCCTATTCATGGAGAGATGCACTGGAGCTTGATAATTATCTGCATGCCTGCA AAAGAAACAGAATCTGGGCCGATAATACTTCACTTGGACTCTCTAGGACTCCATTCCAGT CGTGAAGTTTTTTATGTTATTGAGAGCTTCCTCATAGCAGAATGGCAACATCTACAGAAT GATTCTTCTTATACTATCCCCTTTTCAGGGAGAATATGGAATCATCTATCAAAAAATATA AACAAGGAAAAAGTTCAGGTGCCAAGTCAGCGTAATAAGTATGACTGTGGTATCTTTATG CTTCATTACATTGAGAGGTTTATTCAAGAGGCACCAGAGAGGCTGACAAGAGAGAACCTT TGCATGTTTGGACGGAAATGGTTCGATCCCAAGGAAACTTCTGGGCTGCGGGACAGAATT CGGGCACTAATGTTTGATGCATTTGAGAGTGCTCGGATGGATGATGAATCGTCGCAGTCC GAGTCACATTCTGATGATCAATCTGGAGATGAAGATAAAGACAGGGATGGAGTCATGGTT GTGGTGATTGACTAACGATGGATGAATGGCACCTAGCTTTACATTATGTGATGGTACAGT TTCAGGCTTTCAGCAATATCGGCTCTCAAATGTCACGCTGTTTATTAGCTGAAAAATGTC TGTGCTGCTCTGGAGACTGTACTAGAAAAGGATGCGCCAGTGGTGCTTAGCGATGCAATT ATAAAGTACTACACAACGCACATTTCTTGTAGCCTGGTAGTTTATGGGGTTTCAAGATGA AAGTTTAGCGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)