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Oryza sativa
cluster # 12822 cluster # 12822       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12822#0 length = 1596 sequences # 10  
consensus_12822#1 length = 400 sequences # 1  

consensusID : consensus_12822#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1596
fasta sequence
                              [CAGAACCCTAGTCTGCCCCAGCCCGGCTCGTCGCAGGCAAGCATCGCGGCGGCGCGGGCACACCTCCGCCGACACAGGCGCCGCTCCTCCTCCTCCCTTCTCCCCTCTCGTTTCTTGCGGCCGAGGAGTCGCCCCCAACTCAGGTGAAGTCACGATGAGCATCTCGGGCGAGGTCCCCGCCGGCG-AAGGCTCT-GATGGAGAGGAGGTGTTCATCAAT-GAGGAGGACATCATACACGAGATACCCA-TCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGAT-GGGTGATATGCAAGAGGATGATTCCCAATATGCA-TTTCGTGCTCATACAGACGAGATATTCGCTGTGGCATGCAGTCCTACAGATGCATCACTTGTGGCTTCTGGAGGGAAAGACGATAGAGGATTCCTGTGGAAGATTGGATCAGCAGAGGATGTTTTGGAGCTGGCCGGGCACACAGATACTGTCTGCACGGTTGCTTTCAGTTCAGATGGGAATCTTTTGGCTTCTGGAAGTTTTGATGGACGCATAAATGTGTGGAATACAGCTACACGAACACTTCAGGGAACCCTTGAGGGTTCTGGATCTGGCTTCGAGTGGCTTAAATGGCATCCACGAGGGCATTTGATAATTGCAGGATCAGAAGATTGTAATTTGTGGATGTGGAATGCTGACCATAATGCCATTCTGAATACCTTTGCTGGCCATAGTAGCACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGGATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGTTCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCAAACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCAGGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCGGCATCTCACCAAGTTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT-CCCTGGCATGGCTGGGCCCG-TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA-CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT-CTAGGGGATTACAACTGCAAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATA-GCA-TATTTTCCTGATGTTTTGCAGCAAAAACTTTTGTTTTCAATGCCAATGGT]

[+] EMBL AK111863             [CAGAACCCTAGTCTGCCCCAGCCCGGCTCGTCGCAGGCAAGCATCGCGGCGGCGCGGGCACACCTCCGCCGACACAGGCGCCGCTCCTCCTCCTCCCTTCTCCCCTCTCGTTTCTTGCGGCCGAGGAGTCGCCCCCAACTCAGGTGAAGTCACGATGAGCATCTCGGGCGAGGTCCCCGCCGGCG AAGGCTCT GATGGAGAGGAGGTGTTCATCAAT GAGGAGGACATCATACACGAGATACCCA TCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGAT GGGTGATATGCAAGAGGATGATTCCCAATATGCA TTTCGTGCTCATACAGACGAGATATTCGCTGTGGCATGCAGTCCTACAGATGCATCACTTGTGGCTTCTGGAGGGAAAGACGATAGAGGATTCCTGTGGAAGATTGGATCAGCAGAGGATGTTTTGGAGCTGGCCGGGCACACAGATACTGTCTGCACGGTTGCTTTCAGTTCAGATGGGAATCTTTTGGCTTCTGGAAGTTTTGATGGACGCATAAATGTGTGGAATACAGCTACACGAACACTTCAGGGAACCCTTGAGGGTTCTGGATCTGGCTTCGAGTGGCTTAAATGGCATCCACGAGGGCATTTGATAATTGCAGGATCAGAAGATTGTAATTTGTGGATGTGGAATGCTGACCATAATGCCATTCTGAATACCTTTGCTGGCCATAGTAGCACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGGATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGTTCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCAAACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCAGGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCGGCATCTCACCAAGTTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT CCCTGGCATGGCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGCAAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA TATTTTCCTGATGTTTTGCAGCATACTCTTTTGTTTTCAATGCCAATGGT]
[+] EMBL AU166531             [              GCCCCAGCCCGGCTCGTCGCAGGCAAGCATCGCGGCGGCGCGGGCACACCTCCGCCGACACAGGCGCCGCTCCTCCTCCTCCCTTCTCCCCTCTCGTTTCTTGCGGCCGAGGAGTCGCCCCCAACTCAGGTGAAGTCACGATGAGCATCTCGGGCGAGGTCCCCGCCGGCGAAANGCTCTNGATGGAGAGGAGGTGTTCATCAATGGAGGAGGACATCATACACGAGATACCCATTCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGATGGGGTGATATGCAAGAGGATGATTTCCAATATGCATTTTCGTGCTCATACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB657990             [                                                                                                                                                                                                                                       CATACACGAGATACCCA TCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGAT GGGTGATATGCAAGAGGATGATTCCCAATATGCA TTTCGTGCTCATACAGACGAGATATTCGCTGTGGCATGCAGTCCTACAGATGCATCACTTGTGGCTTCTGGAGGGAAAGACGATAGAGGATTCCTGTGGAAGATTGGATCAGCAGAGGATGTTTTGGAGCTGGCCGGGCACACAGATACTGTCTGCACGGTTGCTTTCAGTTCAGATGGGAATCTTTTGGCTTCTGGAAGTTTTGATGGACGCATAAATGTGTGGAATACAGCTACACGAACACTTCAGGGAACCCTTGAGGGTTCTGGATCTGGCTTCGAGTGGCTTAAATGGCATCCACGAGGGCATTTGATAATTGCAGGATCAGAAGATTGTAATTTGTGGATGTGGAATGCTGACCATAATGCCATTCTGAATACCTTTGCTGGCCATAGTAGCACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGGATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGTTCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCAAACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCAGGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB657991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGGATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGTTCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCAAACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCAGGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCGGCATCTCACCAAGTTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT CCCTGGCATGGCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGCA                                                                                                 ]
[+] EMBL CA998237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGTTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT CCCTGGCATGGCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGTCCTAGGGGATTACAACTGCAAGTCCAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA                                                   ]
[+] EMBL CA998208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGTTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACAATGAGGGGGTGACAT CCCTGGCATGGCTGGGCCCGCTCCAGGTTCGTGGCGACAGGGAGCATCTACCGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACTGAGACGTCGCGCAGTCCCTCACCGACTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCGAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGATATACGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGCAAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA TATTTTCCTGATGTTTTGCAG                             ]
[+] EMBL BI803103             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGATCAGAAGCTCATCATCTGGGACCTT GTC CCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACATCCCCTGGCATGGCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCC ACGCAAAACTGTAC ATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCC CTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGTAAGTCGAATC ATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA TATTTCCCTGATGTTTTGCAGCAAAAA                       ]
[+] EMBL BI802895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGACCTTGGTC CCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT CCCTGGCATGGCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCACCGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGTAAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATACGCACTATTTCCCTGATGTTTTGCAGCAAAAA                       ]
[+] EMBL BI812860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ctGGA CTTGGTCGCCCATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACAT CCCTGGCAT GCTGGGCCCG TCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCTCTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGTCTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCA CGGATGGCTCTGCCCTCATCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACC ATACATGATGAAGCC ACGC AAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTTATACATGGAGCC CTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTAC ACTGTAAGTCGAATC ATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA TAaaaaaa                                          ]
[+] EMBL AU068380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACCAATACNTGATGAAACCAANNCAAAACTGTACAATGGTCTCCTCANCCACTTTGGTTANAGGCCAGGGGATTGANANTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGT CTAGGGGATTACAACTGCAAGTCGNANCAATTTTTGTGTGAGCATTTGGCATGGATTAATA GCA TATTTTCCTGATGTTTTGCNGCAAAAAaaaaa                  ]


>consensus_12822#0 CAGAACCCTAGTCTGCCCCAGCCCGGCTCGTCGCAGGCAAGCATCGCGGCGGCGCGGGCA CACCTCCGCCGACACAGGCGCCGCTCCTCCTCCTCCCTTCTCCCCTCTCGTTTCTTGCGG CCGAGGAGTCGCCCCCAACTCAGGTGAAGTCACGATGAGCATCTCGGGCGAGGTCCCCGC CGGCGAAGGCTCTGATGGAGAGGAGGTGTTCATCAATGAGGAGGACATCATACACGAGAT ACCCATCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGATGGG TGATATGCAAGAGGATGATTCCCAATATGCATTTCGTGCTCATACAGACGAGATATTCGC TGTGGCATGCAGTCCTACAGATGCATCACTTGTGGCTTCTGGAGGGAAAGACGATAGAGG ATTCCTGTGGAAGATTGGATCAGCAGAGGATGTTTTGGAGCTGGCCGGGCACACAGATAC TGTCTGCACGGTTGCTTTCAGTTCAGATGGGAATCTTTTGGCTTCTGGAAGTTTTGATGG ACGCATAAATGTGTGGAATACAGCTACACGAACACTTCAGGGAACCCTTGAGGGTTCTGG ATCTGGCTTCGAGTGGCTTAAATGGCATCCACGAGGGCATTTGATAATTGCAGGATCAGA AGATTGTAATTTGTGGATGTGGAATGCTGACCATAATGCCATTCTGAATACCTTTGCTGG CCATAGTAGCACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGG ATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGT TCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCA AACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCA GGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCGGCATCTCACCAAG TTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCG CCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACATCCCTGGCATGGCTGGG CCCGTCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCT CTCCGGGGAGTGCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCCGT CTCTGCTGATGGCAACTCCATCGTCTCCGTGTCCACGGATGGCTCTGCCCTCATCTTCGA CATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGAAGCCAAC GCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTGAGATTTT ATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGTCTAGGGGATTACAACTGC AAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATAGCATATTTTCCTGATGT TTTGCAGCAAAAACTTTTGTTTTCAATGCCAATGGT



consensusID : consensus_12822#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 400
fasta sequence
                              [GATAATTCTGTGTGTGTTGTGAACATAAACTCACGCCACGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCCGCATCTCACCAAGTTACAATTGGGTGGCTACATGGATCATGGATCACAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACATGAGGGGGTGACATCCCTGGCATGGCTGGGCCCGTCCAGGTTCGTGGCGTCCGGGTGCATCCACCGCATGGTGCCAATCTGGGACACCTCTCCGGGGAATTGCGTAAGGGCCTTCGCCGGCCACGTGACTCCTGCAGTCCCTCCCCCGTCTCTTGCTTGGATGGCCAACTCCCATCCTCTCCCTGTTCCAACCGGATNGGNTCCTGCCCCTCA]

[+] EMBL AA754095             [GATAATTCTGTGTGTGTTGTGAACATAAACTCACGCCACGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCCGCATCTCACCAAGTTACAATTGGGTGGCTACATGGATCATGGATCACAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGCAACCACATGAGGGGGTGACATCCCTGGCATGGCTGGGCCCGTCCAGGTTCGTGGCGTCCGGGTGCATCCACCGCATGGTGCCAATCTGGGACACCTCTCCGGGGAATTGCGTAAGGGCCTTCGCCGGCCACGTGACTCCTGCAGTCCCTCCCCCGTCTCTTGCTTGGATGGCCAACTCCCATCCTCTCCCTGTTCCAACCGGATNGGNTCCTGCCCCTCA]


>consensus_12822#1 GATAATTCTGTGTGTGTTGTGAACATAAACTCACGCCACGTTGTTGGCTCACTGGACGGC CACACTGGCTCTATTGAGTGTGTCCGCATCTCACCAAGTTACAATTGGGTGGCTACATGG ATCATGGATCACAAGCTCATCATCTGGGACCTTGGTCGCCAATCGATCCGATGCACTTGC AACCACATGAGGGGGTGACATCCCTGGCATGGCTGGGCCCGTCCAGGTTCGTGGCGTCCG GGTGCATCCACCGCATGGTGCCAATCTGGGACACCTCTCCGGGGAATTGCGTAAGGGCCT TCGCCGGCCACGTGACTCCTGCAGTCCCTCCCCCGTCTCTTGCTTGGATGGCCAACTCCC ATCCTCTCCCTGTTCCAACCGGATNGGNTCCTGCCCCTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12822#0      CAGAACCCTAGTCTGCCCCAGCCCGGCTCGTCGCAGGCAAGCATCGCGGCGGCGCGGGCA 60
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CACCTCCGCCGACACAGGCGCCGCTCCTCCTCCTCCCTTCTCCCCTCTCGTTTCTTGCGG 120
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CCGAGGAGTCGCCCCCAACTCAGGTGAAGTCACGATGAGCATCTCGGGCGAGGTCCCCGC 180
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CGGCGAAGGCTCTGATGGAGAGGAGGTGTTCATCAATGAGGAGGACATCATACACGAGAT 240
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      ACCCATCGACGAGGAAGATCTCCCTGACCGGGATGATGATGAGGATGACGATGGGATGGG 300
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      TGATATGCAAGAGGATGATTCCCAATATGCATTTCGTGCTCATACAGACGAGATATTCGC 360
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      TGTGGCATGCAGTCCTACAGATGCATCACTTGTGGCTTCTGGAGGGAAAGACGATAGAGG 420
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      ATTCCTGTGGAAGATTGGATCAGCAGAGGATGTTTTGGAGCTGGCCGGGCACACAGATAC 480
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      TGTCTGCACGGTTGCTTTCAGTTCAGATGGGAATCTTTTGGCTTCTGGAAGTTTTGATGG 540
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      ACGCATAAATGTGTGGAATACAGCTACACGAACACTTCAGGGAACCCTTGAGGGTTCTGG 600
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      ATCTGGCTTCGAGTGGCTTAAATGGCATCCACGAGGGCATTTGATAATTGCAGGATCAGA 660
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      AGATTGTAATTTGTGGATGTGGAATGCTGACCATAATGCCATTCTGAATACCTTTGCTGG 720
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CCATAGTAGCACAGTGACATGTGGTGATTTTACTCCAGATGGTAAACTTATCTGTACTGG 780
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      ATCAGATGATGCATCATTGAGAATATGGGACCCAAGAACTGCACAAAGCAGACATGTTGT 840
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      TCGAGGCCATGGCTATCATACGGATGGATTAACATGCTTATCAGTTACTTCGGATTCCCA 900
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      AACAATTGTTAGTGGTTCAAAGGATAATTCTGTGTGTGTTGTGAACATAAACTCAGGCCA 960
consensus_12822#1      ----------------------GATAATTCTGTGTGTGTTGTGAACATAAACTCACGCCA 38
                                             ********************************* ****

consensus_12822#0      GGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCGGCATCTCACCAAG 1020
consensus_12822#1      CGTTGTTGGCTCACTGGACGGCCACACTGGCTCTATTGAGTGTGTCCGCATCTCACCAAG 98
                        ********************************************* *************

consensus_12822#0      TTACAATTGGGTGGCTACAGGGAGCATGGATCAGAAGCTCATCATCTGGGACCTTGGTCG 1080
consensus_12822#1      TTACAATTGGGTGGCTACATGGATCATGGATCACAAGCTCATCATCTGGGACCTTGGTCG 158
                       ******************* *** ********* **************************

consensus_12822#0      CCAATCGATCCGATGCACTTGCAACCACGATGAGGGGGTGACATCCCTGGCATGGCTGGG 1140
consensus_12822#1      CCAATCGATCCGATGCACTTGCAACCAC-ATGAGGGGGTGACATCCCTGGCATGGCTGGG 217
                       **************************** *******************************

consensus_12822#0      CCCGTCCAGGTTCGTGGCGTCGGGGTGCATCGACGGCATGGTGCGAATCTGGGACAGCCT 1200
consensus_12822#1      CCCGTCCAGGTTCGTGGCGTCCGGGTGCATCCACCGCATGGTGCCAATCTGGGACA-CCT 276
                       ********************* ********* ** ********* *********** ***

consensus_12822#0      CTCCGGGGAGT-GCGTGAGGGCCTTCGCCGGCCACGGTGACGTCGTGCAGTCCCTCGCC- 1258
consensus_12822#1      CTCCGGGGAATTGCGTAAGGGCCTTCGCCGGCCACG-TGAC-TCCTGCAGTCCCTCCCCC 334
                       ********* * **** ******************* **** ** *********** ** 

consensus_12822#0      GTCTCT-GCT--GATGGC-AACTCC-ATCGTCTCCGTGTCCACGGATGGCTCTGCCCTCA 1313
consensus_12822#1      GTCTCTTGCTTGGATGGCCAACTCCCATCCTCTCCCTGTTC-CAACCGGATNGGNTCCTG 393
                       ****** ***  ****** ****** *** ***** *** * *    ** *  *  *   

consensus_12822#0      TCTTCGACATTTCCATGTTCAAGTGAAACCATAGTAGCAGTAGTTACCAATACATGATGA 1373
consensus_12822#1      CCCCTCA----------------------------------------------------- 400
                        *    *                                                     

consensus_12822#0      AGCCAACGCAAAACTGTACAATGGTCTCCTCAGCCACTTTGGTTATAGGCCAGGGGATTG 1433
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      AGATTTTATACATGGAGCCACTGCGAGTTGTACAATTAAACACCCTCGTCTAGGGGATTA 1493
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CAACTGCAAGTCGAATCAATTTTTGTGTGAGCATTTGGCATGGATTAATAGCATATTTTC 1553
consensus_12822#1      ------------------------------------------------------------
                                                                                   

consensus_12822#0      CTGATGTTTTGCAGCAAAAACTTTTGTTTTCAATGCCAATGGT 1596
consensus_12822#1      -------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)