cluster # 12824

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Oryza sativa
cluster # 12824 cluster # 12824 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12824#0 length = 1521 sequences # 4
consensus_12824#1 length = 394 sequences # 3

consensus_12824#2 length = 381 sequences # 1
consensus_12824#3 length = 282 sequences # 3

consensusID : consensus_12824#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1521
fasta sequence

                              [GTTCGCGACTTCTCGTATTCTCTAGCACGCGAAAGCGATTATCTGTTCTTGTTTGGAGGAGTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGAC------GCTGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGGCGGAGGCTGGCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGATCACCGAGGGGCTCGGGCTGAAGCACCACGTCGCCGACGTCGACGAGGAGGAGGACGCCGCGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGCAGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGTCGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCGAGGCGACCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCGAGGCGGCCGGCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGCAAGGCCAAGGTCGAAGAGACGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAGGGACAAGGCCGGCAAGGCGCAGGAGACGCTCCGGCAATCCACCGACGCCGCCGCGGAGAAGGCCGGGGCGGCGAAGGACAGCGCGTGGGAGAGGACCAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGACGCGGCGTGGGAGAAGACAAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGGCGGCGAAGGACGCGGCGCGGGAGAAGGCGGAGGCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGAGGCGGCGAAGGGGAAGGCCGGCGCGGCGAAGGACGCGGCGTGGGAGAAGGCGGAGGCGGCGAAGGACGCCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTACGAGAAGGTGAAGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCATGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCACTCAAAACTGAATCTTTTGCTG]

[+] EMBL AK121575             [GTTCGCGACTTCTCGTATTCTCTAGCACGCGAAAGCGATTATCTGTTCTTGTTTGGAGGAGTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGAC      GCTGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGGCGGAGGCTGGCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGATCACCGAGGGGCTCGGGCTGAAGCACCACGTCGCCGACGTCGACGAGGAGGAGGACGCCGCGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGCAGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGTCGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCGAGGCGACCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCGAGGCGGCCGGCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGCAAGGCCAAGGTCGAAGAGACGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGACTCTCCGGCAATCCACCGACGCCGCCAGGGACAAGGCCGGCAAGGCGCAGGAGACGCTCCGGCAATCCACCGACGCCGCCGCGGAGAAGGCCGGGGCGGCGAAGGACAGCGCGTGGGAGAGGACCAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGACGCGGCGTGGGAGAAGACAAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGGCGGCGAAGGACGCGGCGCGGGAGAAGGCGGAGGCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGAGGCGGCGAAGGGGAAGGCCGGCGCGGCGAAGGACGCGGCGTGGGAGAAGGCGGAGGCGGCGAAGGACGCCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTACGAGAAGGTGAAGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCATGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCACTCAAAACTGAATCTTTTGCTG]
[+] EMBL CA758401             [                                           TGTTCTTGTTTGGAGGAGTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGACGCTGCTGCTGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGACGGAGGCTGGCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGATCACCGAGGGGCTCGGGCTGAAGCACCACGTCACCGACGTCGACGAGGAGGAGGACGCCGCGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGCAGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGTCGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCGAGGCGTCCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCNAGGCGGCCGGCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGGCAGGCCAAGGTCGAAGAGACGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCC AGGACAAGGCCGGCAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AU181872             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGACGCCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTACGAGAAGGTGAAGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCAACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACT                               ]
[-] EMBL C28434               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGNAAAAGCCCCNCACGGTCGACGAGCTCTGAGCTAGCCGNCGTCGTACGGACACCGATTAGCCCATGTCAATATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGATCTTGTTTGAAACAAGTTACTGTGTTTTTCCCAC                                ]




>consensus_12824#0
GTTCGCGACTTCTCGTATTCTCTAGCACGCGAAAGCGATTATCTGTTCTTGTTTGGAGGA
GTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGACGC
TGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGGCGGAGGCTG
GCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGA
TCACCGAGGGGCTCGGGCTGAAGCACCACGTCGCCGACGTCGACGAGGAGGAGGACGCCG
CGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGC
AGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGT
CGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCG
AGGCGACCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCGAGGCGGCCG
GCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGCAAGGCCAAGGTCGAAGAGA
CGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCCAAGGACAAGGCCGGCAAGGCGC
AGGAGACTCTCCGGCAATCCACCGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGA
CTCTCCGGCAATCCACCGACGCCGCCAGGGACAAGGCCGGCAAGGCGCAGGAGACGCTCC
GGCAATCCACCGACGCCGCCGCGGAGAAGGCCGGGGCGGCGAAGGACAGCGCGTGGGAGA
GGACCAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGACGCGGCGT
GGGAGAAGACAAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGGCGGCGAAGGACG
CGGCGCGGGAGAAGGCGGAGGCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGAGGCGGCGA
AGGGGAAGGCCGGCGCGGCGAAGGACGCGGCGTGGGAGAAGGCGGAGGCGGCGAAGGACG
CCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTACGAGAAGGTGA
AGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACG
CCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCATGTCGACGGCAAGCAAAAGC
CCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTAGCCCATGT
CAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGC
CGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTT
TGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCAC
TCAAAACTGAATCTTTTGCTG

consensusID : consensus_12824#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 394
fasta sequence

                              [CCCGTGGAAACGCCGAAGCCGCCNAGGAAGAAGCCGAACGAGGGGTACCAAGAAGNTGAAGAAGAAGNCGAAGAAGAAGGTGGAGGAGGTGTAGGAACGCGTTCAAC-GCGCCGACGACGNCCNCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTA-CCGCCGGCGT-ACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C99382               [CCCGTGGAAACGCCGAAGCCGCCNAGGAAGAAGCCGAACGAGGGGTACCAAGAAGNTGAAGAAGAAGNCGAAGAAGAAGGTGGAGGAGGTGTAGGAACGCGTTCAAC GCGCCGACGACGNCCNCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTA CCGCCGGCGT ACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAAAA                                        ]
[+] EMBL AU165290             [                                                                                                gCGCG TCACCGGCGCCGACGACGCCGCCGATCACGG AAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTAACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAAAAAAAAAAAAAAAAAAAAA                       ]
[+] EMBL CF316008             [                                                                                                                                                                                                                                                                                                     CACGATGCCGTTTTCTGTATGCTGTTGCATTTTGT CCATAATGTGATCTTTCTGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12824#1
CCCGTGGAAACGCCGAAGCCGCCNAGGAAGAAGCCGAACGAGGGGTACCAAGAAGNTGAA
GAAGAAGNCGAAGAAGAAGGTGGAGGAGGTGTAGGAACGCGTTCAACGCGCCGACGACGN
CCNCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCC
CCGCACGGTCGACGAGCTCTGAGCTACCGCCGGCGTACGGACACCGATTAGCCCATGTCA
ACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCG
TTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12824#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 381
fasta sequence

                              [AGGCGAAGGAGAACGTGGAAGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCCGAGCTATCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTGGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF320916             [AGGCGAAGGAGAACGTGGAAGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCACGGTCGACGAGCTCCGAGCTATCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTGGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12824#2
AGGCGAAGGAGAACGTGGAAGAGGTGAAGGAGCGCGTCACCGGCGCCGACGACGCCGCCG
ATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAGCCCCGCA
CGGTCGACGAGCTCCGAGCTATCCGCCGGCGTACGGACACCGATTAGCCCATGTCAACAT
AGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTGGCTCTCCACACGATGCCGTTTT
CTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATT
CTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_12824#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 282
fasta sequence

                              [GGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAANCATCACCACCGCCACGTCGACGGCAANCAAAANCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACNCCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTAAAAAGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAAAAAAAAAAAAAAAAAAA]

[+] EMBL C97624               [GGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAANCATCACCACCGCCACGTCGACGGCAANCAAAANCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACNCCGATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGTTTGTATTCTGTAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF308153             [                                                                                                                                   GTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTAAAAA                                                                          ]
[-] EMBL CF308154             [                                                                                                                                    TCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATGCCGTTTTCTGTAAAAAa                                                                         ]




>consensus_12824#3
GGCGCCGACGACGCCGCCGATCACGGCAAGGAGAAGAANCATCACCACCGCCACGTCGAC
GGCAANCAAAANCCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACNCC
GATTAGCCCATGTCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCT
CTCCACACGATGCCGTTTTCTGTAAAAAGTTGCATTTTGTACAATAATGTGATCTTTCTG
TAGAGAACTTGTTTGTATTCTGTAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GTTCGCGACTTCTCGTATTCTCTAGCACGCGAAAGCGATTATCTGTTCTTGTTTGGAGGA 60
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GTTCACGTACGTCACGAGCAATGGCGATCGTGTCGCGGTCGAGGAGGCTGGCGGTGACGC 120
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      TGCTGCTGCTGCTGTTTGCTGTGGTGGCGGCGGCCGCCGTGGCGACGAAGGCGGAGGCTG 180
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GCACGGAGGACGCGGCGAGCAAGGAGGACGAGTCGTGGACGGGCTGGGCCAAGGAGAAGA 240
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      TCACCGAGGGGCTCGGGCTGAAGCACCACGTCGCCGACGTCGACGAGGAGGAGGACGCCG 300
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CGCGCAAGGCCGGCCACGCCGCCAAGTCCGCCCAGCACACCGCCTCCGAGGCAGGGAGGC 360
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      AGACGAGCAAGAAGGCCGGGGACGCGAAGGAGGCGGCGGAGGCGACGGCGTCGGGCGCGT 420
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CGAGCAAGGCTGAGCAGGCAAAGGAGAAGACGAAGGAGGCGGCGAAGGGCGCCGCCGGCG 480
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      AGGCGACCAGGAGAGCGGAGCAGGCCAAGCACAAGACCAAGGAGGCCGCCGAGGCGGCCG 540
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GCGAGAGGGGCGCCGAGGTGCACGAGCAGTCGAAGCAGGGCAAGGCCAAGGTCGAAGAGA 600
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CGGCCAAGGAGAAGGCCGGCGAGGGGTACGACGCCGCCAAGGACAAGGCCGGCAAGGCGC 660
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      AGGAGACTCTCCGGCAATCCACCGACGCCGCCAAGGACAAGGCCGGCAAGGCGCAGGAGA 720
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CTCTCCGGCAATCCACCGACGCCGCCAGGGACAAGGCCGGCAAGGCGCAGGAGACGCTCC 780
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GGCAATCCACCGACGCCGCCGCGGAGAAGGCCGGGGCGGCGAAGGACAGCGCGTGGGAGA 840
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GGACCAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGTCGGCGAAGGACGCGGCGT 900
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      GGGAGAAGACAAGCTCGGCGAAGGACGCCGCGGCGGAGAAGGCCGGGGCGGCGAAGGACG 960
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CGGCGCGGGAGAAGGCGGAGGCGGCCGGCGAGAAGGCGAGGCAGTCCAAGGAGGCGGCGA 1020
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      ------------------------------------------------------------
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      AGGGGAAGGCCGGCGCGGCGAAGGACGCGGCGTGGGAGAAGGCGGAGGCGGCGAAGGACG 1080
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      --CCCGTGGAAACGCCGAAGCCGCCNAGGAAGAAGCCGAACGAGGGGTACCAAGAAGNTG 58
consensus_12824#3      ------------------------------------------------------------
consensus_12824#0      CCGCGTGGGAGACGGCGGAGGCGGCGAGGGAGAAGGCGAACGAGGGGTAC-GAGAAGGTG 1139
consensus_12824#2      ------------------------------------------------------------
                                                                                   

consensus_12824#1      AAGAAGAAGNCGAAGAAGAAGGTGGAGGAGGTGTAGGAACGCGTTCAACGCGCCGACGAC 118
consensus_12824#3      ------------------------------------------------GGCGCCGACGAC 12
consensus_12824#0      AAGGAGAAGGCGAAGGAGAAGGTGGAGGAGGTGAAGGAGCGCGTCACCGGCGCCGACGAC 1199
consensus_12824#2      -------AGGCGAAGGAGAACGTGGAAGAGGTGAAGGAGCGCGTCACCGGCGCCGACGAC 53
                                                                        ***********

consensus_12824#1      GNCCNCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAG 178
consensus_12824#3      GCCGCCGATCACGGCAAGGAGAAGAANCATCACCACCGCCACGTCGACGGCAANCAAAAN 72
consensus_12824#0      GCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCATGTCGACGGCAAGCAAAAG 1259
consensus_12824#2      GCCGCCGATCACGGCAAGGAGAAGAAGCATCACCACCGCCACGTCGACGGCAAGCAAAAG 113
                       * *  ********************* ************** *********** ***** 

consensus_12824#1      CCCCGCACGGTCGACGAGCTCTGAGCTA-CCGCCGGCGTACGGACACCGATTAGCCCATG 237
consensus_12824#3      CCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACNCCGATTAGCCCATG 132
consensus_12824#0      CCCCGCACGGTCGACGAGCTCTGAGCTAGCCGCCGGCGTACGGACACCGATTAGCCCATG 1319
consensus_12824#2      CCCCGCACGGTCGACGAGCTCCGAGCTATCCGCCGGCGTACGGACACCGATTAGCCCATG 173
                       ********************* ****** **************** **************

consensus_12824#1      TCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATG 297
consensus_12824#3      TCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATG 192
consensus_12824#0      TCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTAGCTCTCCACACGATG 1379
consensus_12824#2      TCAACATAGCACTTTTCAGTGATGTTTTTCAGTGTGTTTGCTGTGGCTCTCCACACGATG 233
                       ******************************************** ***************

consensus_12824#1      CCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAAAAAAA 357
consensus_12824#3      CCGTTTTCTGTAAAAAGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGT 252
consensus_12824#0      CCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGT 1439
consensus_12824#2      CCGTTTTCTGTATGCTGTTGCATTTTGTACAATAATGTGATCTTTCTGTAGAGAACTTGT 293
                       ************    ***************************************     

consensus_12824#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------------- 394
consensus_12824#3      TTGTATTCTGTAAAAAAAAAAAAAAAAAAA------------------------------ 282
consensus_12824#0      TTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCA 1499
consensus_12824#2      TTGTATTCTGTAGAGAACTTGTTTGAAACAAGTTACTGTGTTTTTCCCACTGAAACTTCA 353
                           *      * * **        *** *                              

consensus_12824#1      ----------------------------
consensus_12824#3      ----------------------------
consensus_12824#0      CTCAAAACTGAATCTTTTGCTG------ 1521
consensus_12824#2      AAAAAAAAAAAAAAAAAAAAAAAAAAAA 381