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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12828#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2382 fasta sequence
[TTGATATGCCCAAGCTTAACCAATACGAAGTTCAGAATAGCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGTCACAAAATTTGTGCCACCCCAACATACAGAAATATGGTACTATGCATTTGGATGTTGGCACGGTGAAGATGCAAAAAAACAGGCAATAACTTTAGAACACCGCGACACCAGCATTATCAACAGACACCTCGGTCAAAAAAAACTACCTGCAGGTCGATGCAATAATAAATGGGATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGGGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGGGCTCTTGCTATTGTCAGGGCTGGATGGCGGTGTGGTGAACT-CCTCTAATGGCTGTAGCTCTTCAAACTTTGTGAATGTCACAAGTACCCTGATTGTGGGTACAACTGGGATGGCAACCTTGACTGGAAAAGTTCCTGGTGGCAGTTTTGTTGTAAGGAGATCTCTCAAGCGACGGATCGCCTTCACCTTGTTCGCAAGAATATCAAGCAGTGGCAAGAGCTCCTCAGTCCGAAGAGGGAAGTTAGGAGAAAGCCAGAGAACAGGCCTTAGACCTTTCTTGTACTCGCTTTCTTTGCTACCTTCTTTGCGCCTATGTCCACACTCCGACGAAGCAGCAGGTCTCCGATAATCCCTTTCCTTGCCCCTTCTGCTCTCATCCCCTCTTACTACATCTACCGAATGCCTTCCTGGCCTAGTTTGTACATTCGATGGAGATTCAATAAGGATATCGCTCACCTTCTCATCTACACAGAGCGAACTCCTTGGAGGTGCCATCTTCTTCGTCCCCTCTAGCTTGCTACTCTGAACCCTCTTTCCCCAATGACCAAACCAACCTTTCTTATCATGTTTACTATCCCCATTTCCGGAGATGCTCAAATCCTCAATTGGTATCTCTCTCTCCCTCGGCTCAACACAGCTATGTCGAGGACCAACAAACGTGTCGGACTGGCCTTCACCACCAGCACCATCAGGAGAGTCCATCTTAAGCGCGGCTTCCAACTGCTTCTTCTCCTCTTCAGTCAAAACATCGTCGAAGCCCTCGCTCTCGGTATCGTTCTCGTTGCAAGCCGAGAAGAATTCCTCGTCCGTCATCGCGCCGGGGACCCTCCTTGATTTGACACTGACCATCACATGGTGCATGTCATACACCTTGGCCTTCCATGGCCCAACCGACTCGGTCCTCTCCTGGCGCCGCCATGTGAGCTGCGGGAGCAGCACGGCCTGCGTGACGTCTATTCCGGGGCGGAAGATGTTGGTCTGCGACATGGCGGTGACCTCCTGCTGCACCTCGGCCTCGGAGGCGGGCGCGCCAGCGCCTTCCAGGGCGTTCATCACCTCCTTGTCCTTGTGGTTGATCATGCAGAGGGAGCCCGGGGGCACCTTGCCGTCGTCGGAGCCCTCGCCGAGGAAGAGTATGGTCTGGTCGGAGCGCTGGATCTTGAAGCCGTCGAAGCCGGCGAGGGTCATGTCGGCGCGGAGGTTGGCGCCGCGCTTCCAGACCCGGTAGGTGTCGGAGGGGGCGATGCGGGAGATGAAGGGGATGACGGAGCTCTCGAAGTGGAAGGTGATCTCCATGTAGAAGTCGCGCATGCAGCGCATGGCGGCGACGACGCGGGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGCGGCTGGTAGTGGCGGACGATGACGCGGGCGAGCGCCTCCTCGCGGGCGCAGATGGCCTCCTGGAGCGCGCTCCACCCTTGCTCGTTCTGCAGGCTCCAGTCCGCGCCCGCCGCCATCAGCATCTCCGCCGCCGCCGCGTCGCCCAGGCGGACGGCGAGGTGGAGCGGCGTCTCCCGCCCGGGGACGTCGCGCCGGTCGATGACCGCCGACGCCGCCTCCGC]
[+] EMBL CB629975 [ TGATATGCCCAAGCTTAACCAATACGAAGTTCAGAATAGCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGTCACAAAATTTGTGCCACCCCAACATACAGAAATATGGTACTATGCATTTGGATGTTGGCACGGTGAAGATGCAAAAAAACAGGCAATAACTTTAGAACACCGCGACACCAGCATTATCAACAGACACCTCGGTCAAAAAAAACTACCTGCAGGTCGATGCAATAATAAATGGGATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGGGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGGGCTCTTGCTATTGTCAGGGCTGGATGGCGGTGTGGTGAACTCCCTCT ATGGCTGTAGC ]
[+] EMBL CB628173 [ TGATATGCCCAAGCTTAACCAATACGAAGTTCAGAACAGCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGTCACAAAATTTGTGCCACCCCAACATACAGAAATATGGTACTATGCATTTGGATGTTGGCACGGTGAAGATGCAAAAAAACAGGCAATAACTTTAGAACACCGCGACACCAGCATTATCAACAGACACCTCGGTCAAAAAAAACTACCTGCAGGTCGATGCAATAATAAATGGGATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGGGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGG ]
[+] EMBL CB628175 [taGAGATGCCCAAGCTTAACCAATACGAAGTTCAGAATCTCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGTCACAAAATTTGTGCCACCCCAACATACAGAAATATGGTACTATGCATTTGGATGTTGGCACGGTGAAGATGCAAAAAAACAGGCAATAACTTTAGAACACCGCGACACCAGCATTATCAACAGACACCTCGGTCAAAAAAAACTACCTGCAGGTCGATGCAATAATAAATGGGATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGGGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCA ]
[+] EMBL CB677366 [ tctttttttTCGATGCAATAATAAATGGGATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGTGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGGGCTCTTGCTATTGTCAGGGCTGGATGGCGGTGTGGTGAACT CCTCTAATGGCTGTAGCTCTTCAAACTTTGTGAATGTCACAAGTACCCTGATTGTGGGTACAACTGGGATGGCAACCTTGACTGGAAAAGTTCCTGGTGGCAGTTTTGTTGTAAGGAGATCTCTCAAGCGACGGATCGCCTTCACCTTGTTCGCAAGAATATCAAGCAGTGGCAAGAGCTCCTCAGTCCGAAGAGGGAAGTTAGGAGAAAGCCAGAGAACAGGCCTTAGACCTTTCTTGTACTCGCTTTCTTTGCTACCTTCTT ]
[+] EMBL CB673999 [ GATTGAAATGATTTGGGTTAAACGAAAGAATGTTGCGAACAAATCTTTTCATCACATCGAAACTAGACAAGCGGTTGTTTCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATCACACCAAGTATTGCCCTTTCAATGATTTCAGTGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCTATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCTTCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCTCTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCCATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGGGCTCTTGCTATTGTCAGGGCTGGATGGCGGTGTGGTGAACT CCTCTAATGGCTGTAGCTCTTCAAACTTTGTGAATGTCACAAGTACCCTGATTGTGGGTACAACTGGGATGGCAACCTTGACTGGAAAAGTTCCTGGTGGCAGTTTTGTTGTAAGGAGATCTCTCAAGCGACGGATCGCCTTCACCTTGTTCGCAAGAATATCAAGCAGTGGCAAGAGCTCCTCAGTCCGAAGAGGGAAGTTAGGAGAAAGCCAGAGAACAGGCCTTAGACCTTTCTTGTACTCGCTTTCTTTGCTACCTTCTTTGCGCCTATGTCCACACTCCGACGAAGCAGCAGGTCTCCGATAATCCCTTTCCTTGCCCCTTCTG ]
[-] EMBL CB673998 [ GTACTCGCTTTCTTTGCTACCTTCTTTGCGCCTATGTCCACACTCCGACGAAGCAGCAGGTCTCCGATAATCCCTTTCCTTGCCCCTTCTGCTCTCATCCCCTCTTACTACATCTACCGAATGCCTTCCTGGCCTAGTTTGTACATTCGATGGAGATTCAATAAGGATATCGCTCACCTTCTCATCTACACAGAGCGAACTCCTTGGAGGTGCCATCTTCTTCGTCCCCTCTAGCTTGCTACTCTGAACCCTCTTTCCCCAATGACCAAACCAACCTTTCTTATCATGTTTACTATCCCCATTTCCGGAGATGCTCAAATCCTCAATTGGTATCTCTCTCTCCCTCGGCTCAACACAGCTATGTCGAGGACCAACAAACGTGTCGGACTGGCCTTCACCACCAGCACCATCAGGAGAGTCCATCTTAAGCGCGGCTTCCAACTGCTTCTTCTCCTCTTCAGTCAAAACATCGTCGAAGCCCTCGCTCTCGGTATCGTTCTCGTTGCAAGCCGAGAAGAATTCCTCGTCCGTCATCGCGCCGGGGACCCTCCTTGATTTGACACTGACCATCACATGGTGCATGTCATACACCTTGGCCTTCCATGGCCCAACCGACTCGGTCCTCTCCTGGCGCCGCCATGTGAGCTGCGGGAGCAGCACGGCCTGCGTGACGTCTATTCCGGGGCGGAAGATGTTGGTCTGCGACATGGCGGTGACCTCCTGCTGCACCTCGGCCTCGGAGGCGGGCGCGCCAGAGCCTTCCAGGGCGT ]
[-] EMBL CB628172 [ ACCTTGGCCTTCCATGGCCCAACCGACTCGGTCCTCTCCTGGCGCCGCCATGTGAGCTGCGGGAGCAGCACGGCCTGCGTGACGTCTATTCCGGGGCGGAAGATGTTGGTCTGCGACATGGCGGTGACCTCCTGCTGCACCTCGGCCTCGGAGGCGGGCGCGCCAGCGCCTTCCAGGGCGTTCATCACCTCCTTGTCCTTGTGGTTGATCATGCAGAGGGAGCCCGGGGGCACCTTGCCGTCGTCGGAGCCCTCGCCGAGGAAGAGTATGGTCTGGTCGGAGCGCTGGATCTTGAAGCCGTCGAAGCCGGCGAGGGTCATGTCGGCGCGGAGGTTGGCGCCGCGCTTCCAGACCCGGTAGGTGTCGGAGGGGGCGATGCGGGAGATGAAGGGGATGACGGAGCTCTCGAAGTGGAAGGTGATCTCCATGTAGAAGTCGCGCATGCAGCGCATGGCGGCGACGACGCGGGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGCGGCTGGTAGTGGCGGACGATGACGCGGGCGAGCGCCTCCTCGCGGGCGCAGATGGCCTCCTGGAGCGCGCTCCACCCTTGCTCGTTCTGCAGGCTCCAGTCCGCGCCCGCCGCCATCAGCATCTCCGCCGCCGCCGCGTCGCCCAGGCGGACGGCGAGGTGGAGCGGCGTCTCCCGCCCGGGGACGTCGCGCCGGTCGATGACCGCCGACGCCGCCTCCGC]
[-] EMBL CB629974 [ GCGGGAGCAGCACGGCCTGCGTGACGTCTATTCCGGGGCGGAAGATGTCGGTCTGCGACATGGCGGTGACCTCCTGCTGCACCTCGGCCTCGGAGGCGGGCGCGCCAGCGCCTTCCAGGGCGTTCATCACCTCCTTGTCCTTGTGGTTGATCATGCAGAGGGAGCCCGGGGGCACCTTGCCGTCGTCGGAGCCCTCGCCGAGGAAGAGTATGGTCTGGTCGGAGCGCTGGATCTTGAAGCCGTCGAAGCCGGCGAGGGTCATGTCGGCGCGGAGGTTGGCGCCGCGCTTCCAGACCCGGTAGGTGTCGGAGGGGGCGATGCGGGAGATGAAGGGGATGACGGAGCTCTCGAAGTGGAAGGTGATCTCCATGTAGAAGTCGCGCATGCAGCGCATGGCGGCGACGACGCGGGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGCGGCTGGTAGTGGCGGACGATGACGCGGGCGAGCGCCTCCTCGCGGGCGCAGATGGCCTCCTGGAGCGCGCTCCACCCTTGCTCGTTCTGCAGGCTCCAGTCCGCGCCCGCCGCCATCAGCATCTCCGCCGCCGCCGCGTCGCCCAGGCGGACGGCGAGGTGGAGCGGCGTCTCCCGCCCGGGGACGTCGCGCCGGTCGATGACCGCCGACGCCGCCTCCGC]
[-] EMBL CB628174 [ GTTCATCACCTCCTTGTCCTGGTGGTGGATCATGCAGAGGGAGCCCGGGGGCACCTTGCAGTGGTCGGAGCCCTCTCCGAGGAAGAGTATGGTTTGCTCGGAGCGCTGGATCTAGAAGCCGTAGAAGCCGCCGAGGGTCATGTCGGCGCGGAGGTTGGCGCCGCGCTTCCAGACCCGGTAGGTGTCGGAGGGGGCGATGCGGGAGATGAAGGGGATGACGGAGCTCTCGAAGTGGAAGGTGATCTCCATGTAGAAGTCGCGCATGCAGCGCATGGCGGCGACGACGCGGGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGCGGCTGGTAGTGGCGGACGATGACGCGGGCGAGCGCCTCCTCGCGGGCGCAGATGGCCTCCTGGAGCGCGCTCCACCCTTGCTCGTTCTGCAGGCTCCAGTCCGCGCCCGCCGCCATCAGCATCTCCGCCGCCGCCGCGTCGCCCAGGCGGACGGCGAGGTGGAGCGGCGTCTCCCGCCCGGGGACGTCGCGCCGGTCGATGACCGCCGACGCCGCGTCCGC]
consensusID : consensus_12828#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence
[TTAAAATNTTGCTGATATGGCCGGGCTTAACCAATACGAAGTTCAGAATAGCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGGTGGCAAAATTTGTGCCACCCATACATACAGAAATATGGTACTATGCATTTGGATGTTGGCCACGGTGAAGCATGCACACAAAAACAGGCAATCANACTTTCAGCAACCACCCGCGACCACCCAGCATTCATCAACAGACCACCTCGGTCCACACACACAAACACTACCTGCCAGGTCGATGCCAATAATAAATGGGATTGAAATGATTTGGGTTCAACACGCACACAGACATGTTGCGAACCACAATCTTTTCATCCACATCGACACACTCAGGACCACAGCGGTTGTTATCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATACACACCAAGTATTGCCCTTTCANA]
[-] EMBL BQ906498 [TTAAAATNTTGCTGATATGGCCGGGCTTAACCAATACGAAGTTCAGAATAGCAGACCAGATAAGACACTAAAGACAAATTCAACCATGAATATTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGTTAAGTGTGCACCTTCATGGTGGCAAAATTTGTGCCACCCATACATACAGAAATATGGTACTATGCATTTGGATGTTGGCCACGGTGAAGCATGCACACAAAAACAGGCAATCANACTTTCAGCAACCACCCGCGACCACCCAGCATTCATCAACAGACCACCTCGGTCCACACACACAAACACTACCTGCCAGGTCGATGCCAATAATAAATGGGATTGAAATGATTTGGGTTCAACACGCACACAGACATGTTGCGAACCACAATCTTTTCATCCACATCGACACACTCAGGACCACAGCGGTTGTTATCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCAAATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATACACACCAAGTATTGCCCTTTCANA]
consensusID : consensus_12828#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence
[CATCGTCAGGACGAGCACCATCCCCGAGAAACAAGAAGGTTTGGTCCGAACGCTGGATGCGGAAGCCGTCGAAGCCGGCAAGCGTCATGTCGGCACGCAGCGCAGCTCCACGCTTCCAAATGCGGTAAGTGTCGGAGGGGGCGATGCGGCCGATGAAGGGTATGACGGAGGACTCGAAGTGGAAGGAGATCTCCATGTAGAAGTCTCGGATGCGGTTGATGGAGGCGAGGACGCGCGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGGGGCTGGTAGTGGCGCGCGATGATGGTGGCGATGGCGTCCTCCCGCGTGCAGACGGCCTCCTGGAGCGCGGACCACCCGTCGGCGTTCTGGAGCGACCAGTCGGCGCCGGCGGACATGAGGATGTCGGCGGCGACGGGGTCGCGGAGCCGCACGGCGAGGTGGAGCGGGGTCTCCCTCCGCGGCACGTCGCGGCGGTCGATGGCGGCGGAGACCGCGTCGGCCACGGCCTCGCCGGCGATGGACTCCTCCTCGGTGGCCACCTCCCCGGCGCGCGGGAGGCGCGG]
[-] EMBL CB638445 [CATCGTCAGGACGAGCACCATCCCCGAGAAACAAGAAGGTTTGGTCCGAACGCTGGATGCGGAAGCCGTCGAAGCCGGCAAGCGTCATGTCGGCACGCAGCGCAGCTCCACGCTTCCAAATGCGGTAAGTGTCGGAGGGGGCGATGCGGCCGATGAAGGGTATGACGGAGGACTCGAAGTGGAAGGAGATCTCCATGTAGAAGTCTCGGATGCGGTTGATGGAGGCGAGGACGCGCGGGAGGCGGCGGCACCACTTGGCCCAGGCGAGGGGCTGGTAGTGGCGCGCGATGATGGTGGCGATGGCGTCCTCCCGCGTGCAGACGGCCTCCTGGAGCGCGGACCACCCGTCGGCGTTCTGGAGCGACCAGTCGGCGCCGGCGGACATGAGGATGTCGGCGGCGACGGGGTCGCGGAGCCGCACGGCGAGGTGGAGCGGGGTCTCCCTCCGCGGCACGTCGCGGCGGTCGATGGCGGCGGAGACCGCGTCGGCCACGGCCTCGCCGGCGATGGACTCCTCCTCGGTGGCCACCTCCCCGGCGCGCGGGAGGCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12828#0 -----------------------------------TTGATATGCCCAA---GCTTAACCA 22
consensus_12828#1 ------------------------TTAAAATNTTGCTGATATGGCCGG---GCTTAACCA 33
consensus_12828#2 CATCGTCAGGACGAGCACCATCCCCGAGAAACAAGAAGGTTTGGTCCGAACGCTGGATGC 60
* * ** * *** *
consensus_12828#0 ATACGAAGTTCAGAATAGCAGACCAGATAA-GACACTAAAGACAAATTCAACCATGAATA 81
consensus_12828#1 ATACGAAGTTCAGAATAGCAGACCAGATAA-GACACTAAAGACAAATTCAACCATGAATA 92
consensus_12828#2 GGAAGCCGTCGAAGCCGGCAAGCGTCATGTCGGCACGCAGCGCAGCTCCACGCTTCCAAA 120
* * ** * *** * ** * *** * ** * ** * * * *
consensus_12828#0 TTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGT 141
consensus_12828#1 TTGATCCCTGCACCCAGCAAAGACAGAAAATTAATCTACCATACAATGATCTACTTAAGT 152
consensus_12828#2 T-GCGGTAAGTGTCGGAGGGGGCGATGCGGCCGATGAAGGGTATGACGGAGGACTCGAAG 179
* * * * * * ** * ** * * *** *
consensus_12828#0 TAAGTGTGCACCTTCATG-TCACAAAATTTG-TGCCACCCCAACATACAGAAATATGGTA 199
consensus_12828#1 TAAGTGTGCACCTTCATGGTGGCAAAATTTG-TGCCACCCATACATACAGAAATATGGTA 211
consensus_12828#2 TGGAAGGAGATCTCCATG-TAGAAGTCTCGGATGCGGTTGATGGAGGCGAGGACGCG-CG 237
* * * ** **** * * * * *** * * * *
consensus_12828#0 CTATGCATTTGGATG--TTGGC-ACGGTGAAG---ATGCAAAAAAACAGGCAATAAC-TT 252
consensus_12828#1 CTATGCATTTGGATG--TTGGCCACGGTGAAGCATGCACACAAAAACAGGCAATCANACT 269
consensus_12828#2 GGAGGCGGCGGCACCACTTGGCCCAGGCGAGGG--GCTGGTAGTGGCGCGCGATGATGGT 295
* ** * * ***** ** ** * * * ** ** * *
consensus_12828#0 TAGA---ACA-----CCGCGACA--CCAGCATT-ATCAACAGAC-ACCTCGGTCAAAA-- 298
consensus_12828#1 TTCA---GCAACCACCCGCGACCACCCAGCATTCATCAACAGACCACCTCGGTCCACACA 326
consensus_12828#2 GGCGATGGCGTCCTCCCGCGTGCAGACGGCCTCCTGGAGCGCGGACCACCCGTCGGCGTT 355
* ***** * ** * * * * * ***
consensus_12828#0 ----AAAACTACCTGC-AGGTCGATGC-AATAATAAATGGGATTGAAATGATTTGGGTTA 352
consensus_12828#1 CACAAACACTACCTGCCAGGTCGATGCCAATAATAAATGGGATTGAAATGATTTGGGTTC 386
consensus_12828#2 CTGGAGCG--ACC-----AGTCGGCGCCGGCGGACATGAGGATGTCGGCGGCGACGGGGT 408
* *** **** ** * **** * **
consensus_12828#0 AACG-----AAAGA-ATGTTGCGAACAA--ATCTTTTCATC-ACATCGAAACT----AGA 399
consensus_12828#1 AACACGCACACAGACATGTTGCGAACCACAATCTTTTCATCCACATCGACACACTCAGGA 446
consensus_12828#2 CGCG------GAGCCGCACGGCGAGGTGGAGCGGGGTCTCCCTCCGCGGCACG------- 455
* ** **** ** * * ** **
consensus_12828#0 CAA--GCGGTTGTT-TCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCA 456
consensus_12828#1 CCACAGCGGTTGTTATCTTGACATTCGACATCAGTCACCTGCAGCTCGTCGAAATCTTCA 506
consensus_12828#2 TCGCGGCGGTCGATGGCGGCGGAGACCGCGTCGGCCACGGCCTCGCCGGCGATGGACTCC 515
***** * * * * * * ** * *** * ** *** **
consensus_12828#0 AATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCAT-CACACCAAGTATTGCCCT 515
consensus_12828#1 AATCTCCCACTCATCCTTCCTGTTAGATCAGAAGGTATCATACACACCAAGTATTGCCCT 566
consensus_12828#2 TCCTCGGTGGCCACCTCCCCGGCGCG--CGGGAGGCGCGG-------------------- 553
** * ** * * * * ***
consensus_12828#0 TTCAATGATTTCAGGGTCATCCACGACATTGTCTCAAACCACCACCAGCGCTATCTATCT 575
consensus_12828#1 TTCANA------------------------------------------------------ 572
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 ATGCCGCCGCATTTCGGCCTTTCTTCGACTTACTCTTGTTTTCTTGTGTCTTCTTTTTCT 635
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TCTCTTCTGGTGTCGTCCACACATAATCAGCAGGGATGACAAATGGGTCCTGGATGTCCT 695
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CTACACGGCTGCTGGGGCCTGGAGCTGTTGAGAAGTTCTGATGGTAAGGAGCCTTGATCC 755
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 ATTGAATCCAAGAACTTGAGGAAGACTGCGCCACTGGGCTCTTGCTATTGTCAGGGCTGG 815
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 ATGGCGGTGTGGTGAACTCCTCTAATGGCTGTAGCTCTTCAAACTTTGTGAATGTCACAA 875
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GTACCCTGATTGTGGGTACAACTGGGATGGCAACCTTGACTGGAAAAGTTCCTGGTGGCA 935
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GTTTTGTTGTAAGGAGATCTCTCAAGCGACGGATCGCCTTCACCTTGTTCGCAAGAATAT 995
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CAAGCAGTGGCAAGAGCTCCTCAGTCCGAAGAGGGAAGTTAGGAGAAAGCCAGAGAACAG 1055
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GCCTTAGACCTTTCTTGTACTCGCTTTCTTTGCTACCTTCTTTGCGCCTATGTCCACACT 1115
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CCGACGAAGCAGCAGGTCTCCGATAATCCCTTTCCTTGCCCCTTCTGCTCTCATCCCCTC 1175
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TTACTACATCTACCGAATGCCTTCCTGGCCTAGTTTGTACATTCGATGGAGATTCAATAA 1235
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GGATATCGCTCACCTTCTCATCTACACAGAGCGAACTCCTTGGAGGTGCCATCTTCTTCG 1295
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TCCCCTCTAGCTTGCTACTCTGAACCCTCTTTCCCCAATGACCAAACCAACCTTTCTTAT 1355
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CATGTTTACTATCCCCATTTCCGGAGATGCTCAAATCCTCAATTGGTATCTCTCTCTCCC 1415
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TCGGCTCAACACAGCTATGTCGAGGACCAACAAACGTGTCGGACTGGCCTTCACCACCAG 1475
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CACCATCAGGAGAGTCCATCTTAAGCGCGGCTTCCAACTGCTTCTTCTCCTCTTCAGTCA 1535
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 AAACATCGTCGAAGCCCTCGCTCTCGGTATCGTTCTCGTTGCAAGCCGAGAAGAATTCCT 1595
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CGTCCGTCATCGCGCCGGGGACCCTCCTTGATTTGACACTGACCATCACATGGTGCATGT 1655
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CATACACCTTGGCCTTCCATGGCCCAACCGACTCGGTCCTCTCCTGGCGCCGCCATGTGA 1715
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GCTGCGGGAGCAGCACGGCCTGCGTGACGTCTATTCCGGGGCGGAAGATGTTGGTCTGCG 1775
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 ACATGGCGGTGACCTCCTGCTGCACCTCGGCCTCGGAGGCGGGCGCGCCAGCGCCTTCCA 1835
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GGGCGTTCATCACCTCCTTGTCCTTGTGGTTGATCATGCAGAGGGAGCCCGGGGGCACCT 1895
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TGCCGTCGTCGGAGCCCTCGCCGAGGAAGAGTATGGTCTGGTCGGAGCGCTGGATCTTGA 1955
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 AGCCGTCGAAGCCGGCGAGGGTCATGTCGGCGCGGAGGTTGGCGCCGCGCTTCCAGACCC 2015
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GGTAGGTGTCGGAGGGGGCGATGCGGGAGATGAAGGGGATGACGGAGCTCTCGAAGTGGA 2075
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 AGGTGATCTCCATGTAGAAGTCGCGCATGCAGCGCATGGCGGCGACGACGCGGGGGAGGC 2135
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 GGCGGCACCACTTGGCCCAGGCGAGCGGCTGGTAGTGGCGGACGATGACGCGGGCGAGCG 2195
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CCTCCTCGCGGGCGCAGATGGCCTCCTGGAGCGCGCTCCACCCTTGCTCGTTCTGCAGGC 2255
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 TCCAGTCCGCGCCCGCCGCCATCAGCATCTCCGCCGCCGCCGCGTCGCCCAGGCGGACGG 2315
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CGAGGTGGAGCGGCGTCTCCCGCCCGGGGACGTCGCGCCGGTCGATGACCGCCGACGCCG 2375
consensus_12828#1 ------------------------------------------------------------
consensus_12828#2 ------------------------------------------------------------
consensus_12828#0 CCTCCGC 2382
consensus_12828#1 -------
consensus_12828#2 -------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||