cluster # 1284

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Oryza sativa
cluster # 1284 cluster # 1284 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1284#0 length = 730 sequences # 2

consensusID : consensus_1284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 730
fasta sequence

                              [CCNCNTCGAGTTCGNCCCACGCGTACCGCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGGCCACCGTCGTGCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGTTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGTGTGTGTGTGTGTGATGTGTTAATCGATGTGCTATGTTTTTTTTTTTTTTAGAACTCATGCCCACTTTATTTAATAAGAAAAGAGTTTAGAAGCATAGAGCATGAGCTATAGTTACATCCTCGTTGGGAGTAAGAAGAAGTCCTCTCCTGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTNATGGTGTATCCACAGATGAAGTGATGAATTTTTTNNNAAAAAAAAAANNNNNNNAAANNNNNNNAAAAAAAACTCGGGGGGGGCCCGGTCCCCAATTGCCCTATAGT]

[+] EMBL AU096762             [CCNCNTCGAGTTCGNCCCACGCGTACCGCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTTCATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATCTAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAAGAGCAGCAGCACCAAGGCCACCGTCGTGCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BE040764             [                                                                                                                                                                                            GCACCAAGGCCACCGTCGTGCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCAGTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTGCAGGTGCAACCCTTGCAACTGTTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGCGTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAATATATATGGTGTGTGTGTGTGTGATGTGTTAATCGATGTGCTATGTTTTTTTTTTTTTTAGAACTCATGCCCACTTTATTTAATAAGAAAAGAGTTTAGAAGCATAGAGCATGAGCTATAGTTACATCCTCGTTGGGAGTAAGAAGAAGTCCTCTCCTGATGTGCTATGTTATTGGTTTCACTATTCACGTACTATGCTTGTNATGGTGTATCCACAGATGAAGTGATGAATTTTTTNNNAAAAAAAAAANNNNNNNAAANNNNNNNAAAAAAAACTCGGGGGGGGCCCGGTCCCCAATTGCCCTATAGT]




>consensus_1284#0
CCNCNTCGAGTTCGNCCCACGCGTACCGCAAAAGCTCTTCTTCTTCTCCTTAGTTGATTT
CATCTTCAGTTGCTTGAGCTTAATTACAGACTGAGAGAAGATGTCTTGCAGCTGTGGATC
TAGCTGCAGCTGCGGCTCAAACTGCTCCTGCGGAAAGAAGTACCCTGACCTGGAAGAGAA
GAGCAGCAGCACCAAGGCCACCGTCGTGCTGGGTGTGGCGCCGGAGAAGAAGGCGCAGCA
GTTTGAGGCGGCCGCAGAGTCCGGCGAGACCGCCCATGGCTGCAGCTGCGGTTCCAGCTG
CAGGTGCAACCCTTGCAACTGTTAAGATGCCTGCCTGCATCTACCATCTATCATGTGTGC
GTGTGAATTGTGATGCAGAAAAATAAAGAAGCTTGGCCATTTGGGTTGGTGCTTGACCAA
TATATATGGTGTGTGTGTGTGTGATGTGTTAATCGATGTGCTATGTTTTTTTTTTTTTTA
GAACTCATGCCCACTTTATTTAATAAGAAAAGAGTTTAGAAGCATAGAGCATGAGCTATA
GTTACATCCTCGTTGGGAGTAAGAAGAAGTCCTCTCCTGATGTGCTATGTTATTGGTTTC
ACTATTCACGTACTATGCTTGTNATGGTGTATCCACAGATGAAGTGATGAATTTTTTNNN
AAAAAAAAAANNNNNNNAAANNNNNNNAAAAAAAACTCGGGGGGGGCCCGGTCCCCAATT
GCCCTATAGT

clustalw multiple alignements is not computed in this case