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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12846#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2431 fasta sequence
[TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCAATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTGCTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTATCAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCGAAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTTTGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG-GTGGCGGCGGAGGTGG-TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAAAAAAA]
[+] EMBL AK099750 [TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCAATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTGCTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTATCAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCGAAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTTTGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCCGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAAT ]
[+] EMBL CB669412 [ CGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCTATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGCTTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCCTCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTGTTACTCCCTCCGACCCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAATTCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTATGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTTACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGC ]
[+] EMBL AK061802 [ TAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAGTAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAAAGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTGAGCGGCCTCACCATGAGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTGGATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTCCTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTCCCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACAGCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATAGGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACTCTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGAAGCAATATTATCCCTGGTACATGGTCAATCTCAATGATTAATATATGTTCTGAATTATTCATGATGCTTTACCTCCAGTTACTGAACTTCAAAACTGATGAAAGGGAAAATGCTAGCTTGCTTATCTGCATACTTCACTGTCAGATCTTCTCATTGACTGCTTTTTTGTGCGAACGCTATTGACAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAAT ]
[-] EMBL CF311377 [ taagaAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTG GTGGCGGCGGAGGTGG TGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACCTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAA ]
[+] EMBL BI803429 [ CCAAAGGAAAAACTCA GGGCCAAAATTGGATGAT GGACCGGT GTTTTCCTCCATTCCGTTTCGGCAAA GT GT GT GC GCGGA GTGG TGGAGGT GCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGAT CAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTGAGTTCAGTGCTGTGGTACATCC AATGGACCGTATTATTGCAGGTGTTGAAATTGGAATGCTTTTTGGAATGTTGAATC C AATTGACCCTTTTGGAAAAAA]
[+] EMBL BQ906248 [ CCGTTTCGGCAAAGGTGGTGTGT GCGGCGGAGGTGGTTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC ATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAATCATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATNTGAGTTCAGTGCTGTGGTACATCCAAAa ]
consensusID : consensus_12846#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 821 fasta sequence
[TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCT-TCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCAC-TGCCAGGGGCTG-TAACCACTCATGCATCAACCA-GGAGATTTGGAGGTTCACAA-TTTCAGACATCTCAAGCT-AGCTGCATC-TCATTTAAAA-GGGAAGTGTCTGCTAAAGCAGTA-TTAAGAA-GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF311376 [TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCT TCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCAC TGCCAGGGGCTG TAACCACTCATGCATCAACCA GGAGATTTGGAGGTTCACAA TTTCAGACATCTCAAGCT AGCTGCATC TCATTTAAAA GGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGG ]
[+] EMBL OSC999 [ cntnccntnCCTNTCGCCGCCGCCTACGACGAGGCTTTTCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGC CCTNCAGCAGCAGGATCCACCCTCGCGCCACCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTNGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTGCTCACTTGCCA GGGNTGTTAACCACTCATGCATCAACCAGGGAGATTTTGAGGTTCACAATTTTCAGACATCTCAAGCTAAGCTGCATCTTAATTTAAAAGGGGAAGTGTCTGCTAAAGNAGTATTTAAGAAGGCGTAAGATGCAATTCCACTt ]
[+] EMBL C74207 [ CGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCGGCGGCGGCG CCTCAGCAGCAGGATCCACCCTCGCGCCANCCCAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTNAACACTTGTCACGTGCTCACTTGCCAGGGGCTG TNACCACTCATGCATCAACCA GGAGATTTGGAGG TCACAA TTTCAGACATCTCAAGCT AG TGCATC TCATTTAAAA GGAAGTGT TTCTAAA NAGTT TTAAGAA GCGTAAGATG NATG CACTaancc ]
[+] EMBL CB000270 [ CAGACATCTCAAGCT AGCTGCATC TCATTTAAAA CGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCCTGCCGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA999141 [ ACATCTCAAGCT AGCTGCATC TCATTTAAAA GGGAAGTGTCTGCTAAAGCAGTA TTAAGAA GCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACTGCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGGAGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGAGGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTACCTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAACAATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGTAAAACTCTACAAGAATTCC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12846#0 TCCTTCGCCGCCGCCTACGACGAGGCTTTCCTCCTCTCTCCCATCGCCTTCCTCCTCTCC 60
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TCCCTTTCCTCCCAGGCGGCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCC 120
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CAGGCCGGCCGATCCGATCCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGC 180
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CGCCGAATCGTCGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACA 240
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CTTGTCACGTGCTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGA 300
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 GGTTCACAATTTCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCT 360
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 AAAGCAGTATTAAGAGTAAGTTGGAATATATCATAGATTCATATCTACCTCAATCTTCCT 420
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 ATAAACAAAATTAAGTGTTCAATTCCTGCAAACAAATTTACTATTTTCTGTTTGGTTAGC 480
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TTATTGTGAGTTCATGACAATAAGGCATTTGATCAATAACCAAATTGGCATGTATCACCC 540
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TCTTTTTATTATATATGATTATATATAGATTCTATAGAAAAATTGAATTAGGAGTTACTG 600
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TTACTCCCTCCGACTCAAAATATGACAACTTAGGACCAGATTGGACACCCCTGTCCAAAT 660
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TCGTAGTACTAGGATATGTCCAATTCTGTCCTAGTTGCTATATTTTGGGACTGAGGAGTA 720
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TGAACTATGAAATATTCATGTTAAAATGGTTTAGTTCAAAATACAGTAGATAAGGATTTT 780
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 ACCATACTTGATTGGTTTATTGGTTATACCCTTCCTAGCTAGTACTAATCGTAGTGCTCA 840
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 ATAGGTGCATATCTCATGGGCCATGGCATGTGCATGCTGCATACATTTAAAGATAAGGTG 900
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CTTTGAATTGTTAATTAGTAGATAAAACTGCATCAGCTACCACTACAATTTTGATGGTAT 960
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CAACAAAACATTTCAGTATTTCACCTCTAATATATACCAGCAAGTTGGTCTAAAAATTCG 1020
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 AAATACCTCTTCTGTTACATTTGAAGGCAACGGTGTTAGATAAGGGTGATTTATTGATTT 1080
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TGTCCTTACGTGAATATTAAATTGTTGCACTACCAAATCTCACATCTCTCCAGCAGCCAG 1140
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 TAGTAGTGGCCGGCGGCATCATTAGTGTCGCTGGAGGTGGGCAACAAGTTAATGGAGCAA 1200
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 AGAGACGTGGGCGGTCAAGGCATCAGAGCGTCTGCAGCCTGGCCGAGACCCCCACCTCTG 1260
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 AGCGGCCTCACCATGGGGGTCAGTGTGAGCAGTGTGGCTGGGCTGAGAGCATTGGCTGTG 1320
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 GATGCATACAACCAGGCTGAGGACTGCACTGCCAGGTGGCCTCAGATGTTGACACAGGTC 1380
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CTAGGTGGAGCCTAATGAGATCAAGATCATAAGAACATGCTTTTCCTGGTTTCTTGCTTC 1440
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CCTCTTAGCACGGTAGATTGAGCAGCCAAGCCAAGTAGTGTCACCTCCATGATGAAGACA 1500
consensus_12846#1 ----TTCGCCCTTCTGACTGGACTGAAGGAGTAGAAACTCCTCCTTCGCCGCCGCCTACG 56
** ** * ** ** * * * * * * ** * * **
consensus_12846#0 GCAAGCAGTGGGTATTGCAGTCATTCTGCGTGGTAAAAAAAAGGGGTCAAAACCGAAATA 1560
consensus_12846#1 ACGAGGCTTTCCTCCT-CTCTCCCATCGCCTTCCTCCTCTCCTCCCTTTCCTCCCAGGCG 115
* ** * * * * ** ** * * ** *
consensus_12846#0 GGAACAAAGCATGACAGGGGATGTAATGTTCTGATGTTATTTATTGGGATCACTGAAACT 1620
consensus_12846#1 GCGGCGGCGCCCTCAGCAGCAGGATCCACCCTCGCGCCACCC--CAGGCCGGCCGA---T 170
* * ** * * * ** * * ** * ** *
consensus_12846#0 CTGGTGGTATAGATGCAGTTTTTTCTTAATAGTAGTACTAAAAGA-AGCAATATTATCCC 1679
consensus_12846#1 CCGAT--CCCCAACGCGATCTTGTGGGGGGCGAGGCGCGGAAAGGTGGCCGCCGAATCGT 228
* * * * ** * ** * * * * **** ** ***
consensus_12846#0 TG-GTACATGGTCAATCTCAATGATTAATATATGTTCTGAAT-----TATTCATGATGC- 1732
consensus_12846#1 CGCGTGGTTGGTTGGTTCCTAGATCTTAAAAGTGTCCTCCATGTCAACACTTGTCACGTG 288
* ** **** * * * * * * *** ** ** * * * * *
consensus_12846#0 TTTACCTCCAGTTACTGAACTTCAAAACTGATGAA--AGGGAAAATGCTAGCTTGCTTAT 1790
consensus_12846#1 CTCACTGCCAGGGGCTGTAACCACTCATGCATCAACCAGGAGATTTGGAGGTTCACAATT 348
* ** **** *** * * ** ** *** * ** * * * *
consensus_12846#0 CTGCATACTTCACTGTCAGATCTTCTCATT--GACTGCTTTTTTGTGCGAACGCTATTGA 1848
consensus_12846#1 TCAGACATCTCAAGCTAGCTGCATCTCATTTAAAAGGGAAGTGTCTGCTAAAGCAGT--A 406
* * *** * * ******* * * * * *** ** ** * *
consensus_12846#0 CAACAGAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACT 1908
consensus_12846#1 TTAAGAAGCGTAAGATGCAATGCCACTCAGACCCAAAGTGCTCAGCGGAAATCTTCAACT 466
* ******************************************************
consensus_12846#0 GCAACCGTCAAACGATCTGACCCCAAAGGAAAAACTCAGGGGCCAAAATTGGATGATGGG 1968
consensus_12846#1 GCAACCGTCAAACGATCTGACCCCAAAGGAAAAATTCAGGGGCCAAAATTGGATGATGGG 526
********************************** *************************
consensus_12846#0 AGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGA 2028
consensus_12846#1 AGCGGTGGTTTTCCTCCATTCCGTTTCGGCAAAGGTGGTGGTGGCGGCGGAGGTGGTGGA 586
************************************************************
consensus_12846#0 GGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTAC 2088
consensus_12846#1 GGTGGCAGCAACTACTTCGGTGGATTCCTTCTCTTCACTTGTGTGTTGCTCCTAGATTAC 646
************************************************************
consensus_12846#0 CTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC 2148
consensus_12846#1 CTGAAGGAGTTTGAGAAAAACCTGATTGCTCGAAGGCAACGCGCTGGATATGATGCAAAC 706
************************************************************
consensus_12846#0 AATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGT 2208
consensus_12846#1 AATGATATGTTCCAACAATAATTGTTTAACTTGTTAGCACTACCCTATCTGTTGATCTGT 766
************************************************************
consensus_12846#0 AAAACTCTACAAGAATTCCTGCCGTGCATGTTTATTTCGTTCACATTACCCGTAGTAAAT 2268
consensus_12846#1 AAAACTCTACAAGAATTCCTGCCGTGCAAAAAAA----AAAAAAAAAAAAAAAAAAAAA- 821
**************************** * * * * * ***
consensus_12846#0 CATGGCTTGACCTCACCGAGAGGAAGCTCAGATGCACTGGACACAGCTACTGGAAATGTG 2328
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 AGTTCAGTGCTGTGGTACATCCAAATGGACCGTATTATTGCAGGTGTTGAAATTGGAATG 2388
consensus_12846#1 ------------------------------------------------------------
consensus_12846#0 CTTTTTGGAATGTTGAATCGCAAATTGACCCTTTAAAAAAAAA 2431
consensus_12846#1 -------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||