cluster # 12867

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Oryza sativa
cluster # 12867 cluster # 12867 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12867#0 length = 1028 sequences # 11
consensusID : consensus_12867#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1028
fasta sequence
                              [CCAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAATCCCCTTCTGGATG]

[+] EMBL AK070662             [CCAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAAGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAATCCCCTTCTGGATG]
[+] EMBL AK068769             [ CAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAAGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGG GACGGCCGGATCTCGCGGTCCGAGCTCGGAGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGAGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAA              ]
[+] EMBL AK104094             [  AAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAAT             ]
[+] EMBL AK104159             [          GGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCGATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGCAATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCCACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTTTCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCT                      ]
[+] EMBL CF653635             [                    ACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTTAAAGACCAC                                                                                                                                                                                                                                                                                       ]
[+] EMBL BE230578             [                     CGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGCGTCTTCGACGCCGACGGCAACGGCACCATCTTCGCCGGCGAGCTCGCCCGCGT CTTCACGG CTCGGCGAGAAGGGCACCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BE230037             [                     CGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AU071237             [                      GAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCTTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCNTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGAC CCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGCCAGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU182574             [                            AGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTCAACGCCACCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU182114             [                            AGAGAGAGGCAGAGCAATCGAAGCCCCACGCCATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCGCTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAGATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAGCTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGTCACCGACGACGAGCTCGCCCGCATGATGGCCGAGGNGGACGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU057966             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGTCCTCCACGGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAGAACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCCTTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCCTCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTAAGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAAaaaa                                                                                                                                                                                                                                                         ]




>consensus_12867#0
CCAAAGCCGAGGAGGAGATCACGAGACGAGAGAGAGGCAGAGCAATCGAAGCCCCACGCC
ATGGTCAAGATCAAGATGCCCGCCCTGTTCCGCCGCCGGAGCGGCTCCAAGTCGCCGCCG
CTGCCGCAGGCCGACCCCGCGTCCGGCGGCGGGTCCCCGGCGCCGACGCCGGAGGAGGAG
ATGGAGCGGGTGTTCCGCAAGTTCGACGCCAACGGCGACGGCCGGATCTCGCGGTCCGAG
CTCGGCGCGCTGTTCGAGAGCCTCGGGCACGCGGCCACCGACGACGAGCTCGCCCGCATG
ATGGCCGAGGCGGACGCCGACGGCGACGGCTTCATCAGCCTCGACGAGTTCGCCGCCCTC
AACGCCACCGCCAGCGGCGACGCGGCCGCCGTCGAGGAGGACCTCCGCCACGCCTTCCGC
GTCTTCGACGCCGACGGCAACGGCACCATCTCCGCCGCCGAGCTCGCCCGCGTCCTCCAC
GGCCTCGGCGAGAAGGCCACCGTCCAGCAGTGCCGCCGCATGATCGAGGGCGTCGACCAG
AACGGCGACGGCCTCATCTCCTTCGAGGAATTCAAGGTCATGATGGCCGGAGGCGGCTCC
TTCGCCAAGATCGCCTAGGATCAATCAACCACCCAATTTCTTCCCTTCTCCTCATCCTCC
TCATTGACCAACTCCTATCCATCCATCCATCCGAGCGTGCCGTGTGCGGTGGAAATTTTA
AGTGTATATACAACCGATTAAAAGACCACTAGCCCTAGATTCTTTCTACTAATAATTGCG
ATTCTCAACTACTACTAGTTTCTTTCTTGGTAGATTGGAAATTGGAGGCTAAAAAGCAGC
AATTCTATCCCCTGCTTTTGGTTCTAAGACACGCCAATGCTTTCTCTCTTTTTTTTCCCC
ACAAGATGTAAGCGTTTGCGTGGAGTAAGAGTCTTGGATCTTGGATCTTGCATTCTTGTT
TCGATTGTTCACCATCTGGAATTCTGGATGTCAGTTAATCTGATCTTAATATAATCCCCT
TCTGGATG
clustalw multiple alignements is not computed in this case