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Oryza sativa
cluster # 12868 cluster # 12868       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12868#0 length = 1287 sequences # 10  
consensus_12868#1 length = 454 sequences # 1  

consensusID : consensus_12868#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1287
fasta sequence
                              [CAGTCTCCTCTCCTCTCTTCTCCTCTCCCGCCGCCGCCGCCGCCGCACCCGCCGATCTCCATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCTCG-AGGCGG-AGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGT-GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTG---GCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATT-GGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGG-CTCTACCTGAGC-TTTCAAGTTT-CCAAGATAAATTAGGAA-CAGAGGCTTA-CGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATTGAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGAGTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCATCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAGACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTATCTTGGTTTGTGGAAAAAAAAAAAAAA]

[+] EMBL AK066124             [CAGTCTCCTCTCCTCTCTTCTCCTCTCCCGCCGCCGCCGCCGCCGCACCCGCCGATCTCCATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCTCG AGGCGG AGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGT GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTGGCAGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATT GGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGG CTCTACCTGAGC TTTCAAGTTT CCAAGATAAATTAGGAA CAGAGGCTTA CGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATTGAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGAGTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCATCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAGACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTATC                         ]
[+] EMBL AK068779             [            CTCTCTTCTCCTCTCCCGCCGCCGCCGCCGCCGCACCCGCCGATCTCCATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCTCG AGGCGG AGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGT GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTG   GCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATT GGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGG CTCTACCTGAGC TTTCAAGTTT CCAAGATAAATTAGGAA CAGAGGCTTA CGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAAATTGTCATTGAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGAGTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCATCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAGACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTATCTTGGTTTGTGGA             ]
[+] EMBL AU070145             [                               CGCCGCCGCCGCCGCACCCGCCGATCTCCATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAAGNCGGTCTCTGCGGCGGCGGCGGCGGCGGANAAGTCTCGAAGGCGGAAGGNGGGTCCGCGATGGAAGGCCAGCCGTNGTAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU068889             [                                  CGCCGNCGCCGCACCCGCCGATCTCCATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTNTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCNGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGGCCCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CA754974             [                                                                                                                  ATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCNATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACNAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGAAAAGTCTCG AGGCGG AGGCGGCTCCCCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGT GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTG   GCAGGAACGTGGCACTCATCANGTCTGACNAGGACNATAGGTATGGATTGGGATTCTGTCGTAACTCAGGATGGCACANAGATGCCATGCTGGG CTCTACCTGAGC TTTCAAG TT CCCAGATNAATTAGGAA CAGAGGCTTA CGATNAGGTTGATGTCATAGGTNTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS4535A             [                                                                                                                                                                    ATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCTCG AGGCGG AGGCGGCTNCGCGATGGAGGCCCAGCCGTCGTATTCCGGTGAGATTCACGTAATCGTGGGGCCCCATGTTCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AF066050             [                                                                                                                                                                                                                                                                             cgGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCTCG AGGCGG AGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGT GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTG   GCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATT GGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGG CTCTACCTGAGC TTTCAAGTTT CCAAGATAAATTAGGAA CAGAGGCTTA CGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATTGAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGAGTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCATCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAGACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTATCTTGGTTTGTGGAAAAAAAAAAAAAA]
[+] EMBL OSR27421A            [                                                                                                                                                                                                                                                                                        TCGNCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAATCTTTCCCGATTCGGTCCGNTGAGGCCGGTCTCTGCGGCGGCGNCGNCGNCGNACAAGTCTCG AGGCGG NGGCGGCTCCGCGATGGAGGNCCAGNCGTCGTATCCCGGTGAGATTCACGTNATCGT GGGCCCCATGTTCGCCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA998021             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGATTCACGTCATCGT GGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTG   GCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATT GGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGG CTCTACCTGAGC TTTCAAGTTT CCAAGATAAATTAGGAA CAGAGGCTTA CGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACA                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU086058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGCTGGGNCTCTACCTGAGCTTTTCAAGTTTCCCAAGATAAATTAGGAACCAGAGGCTTACCGATAAGGTTGATGTCATAGGTATTGATGAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGAAAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTTCTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGCGGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGAGGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATTGAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGAGTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCATCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAGACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTATCTTGGTTTGTGGATGGAGGAAAAAA ]


>consensus_12868#0 CAGTCTCCTCTCCTCTCTTCTCCTCTCCCGCCGCCGCCGCCGCCGCACCCGCCGATCTCC ATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGA AATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCT CAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAAT ACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTC CGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAAT CTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCT CGAGGCGGAGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTC ATCGTGGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAG GCCGGCACTGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTG GATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGGCTCTACCTGAGCTTTCA AGTTTCCAAGATAAATTAGGAACAGAGGCTTACGATAAGGTTGATGTCATAGGTATTGAT GAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGA AAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTT CTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGC GGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGA GGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATT GAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGA GTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCA TCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAG ACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTA TCTTGGTTTGTGGAAAAAAAAAAAAAA



consensusID : consensus_12868#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence
                              [CGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCGGCGGCGGACAAGTCTCGAGGCGGAGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGTGGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTGGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGG]

[+] EMBL C96764               [CGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCGGCGGCGGACAAGTCTCGAGGCGGAGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGTGGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCACTGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTGGATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGG]


>consensus_12868#1 CGATTCGAAATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTC CTCCTCCTCAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCT CTACAAATACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCA CCTTCCTCCGCTCCGGCGCTTCCCCTCTGCTGCGGCGGCGGCGGACAAGTCTCGAGGCGG AGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTCATCGTGGG CCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAGGCCGGCAC TGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTGGATTCTGT CGTAACTCATGATGGCACAAAGATGCCATGCTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12868#0      CAGTCTCCTCTCCTCTCTTCTCCTCTCCCGCCGCCGCCGCCGCCGCACCCGCCGATCTCC 60
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      ATCCTGCGAGCAGCGGCGGCGCTCCACCTTTCCCTCCCCAAATTTCAAAACTCGATTCGA 120
consensus_12868#1      ----------------------------------------------------CGATTCGA 8
                                                                           ********

consensus_12868#0      AATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCT 180
consensus_12868#1      AATCTGCCACGCTTTATTCCCGCCATCTCATTCTCACCTACCCAATTGTCTCCTCCTCCT 68
                       ************************************************************

consensus_12868#0      CAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAAT 240
consensus_12868#1      CAAATTTAGGTTGAAAAAGATATTCCCGGCGCCTCCCCACAATCAGCTAGCTCTACAAAT 128
                       ************************************************************

consensus_12868#0      ACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTC 300
consensus_12868#1      ACCTCCCGCATGAGCTCCATTTGCGCCATGAGATCCCTCCTCGCCGCCTCCACCTTCCTC 188
                       ************************************************************

consensus_12868#0      CGCTCCGGCGCTTCCCCTCTGCTGCGGCCCCTTTCCCGTCCTCTCCCTTCCCGCCTGAAT 360
consensus_12868#1      CGCTCCGGCGCTTCCCCTCTGCTGC----------------------------------- 213
                       *************************                                   

consensus_12868#0      CTTTCCCGATTCGGTCCGGTGAGGCCGGTCTCTGCGGCGGCGGCGGCGGCGGACAAGTCT 420
consensus_12868#1      -----------------------------------------GGCGGCGGCGGACAAGTCT 232
                                                                *******************

consensus_12868#0      CGAGGCGGAGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTC 480
consensus_12868#1      CGAGGCGGAGGCGGCTCCGCGATGGAGGCCCAGCCGTCGTATCCCGGTGAGATTCACGTC 292
                       ************************************************************

consensus_12868#0      ATCGTGGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAG 540
consensus_12868#1      ATCGTGGGCCCCATGTTCGCCGGGAAGACCACTGCCCTTCTCCGACGCGTGCAGGTCGAG 352
                       ************************************************************

consensus_12868#0      GCCGGCACTGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTG 600
consensus_12868#1      GCCGGCACTGGCAGGAACGTGGCACTCATCAAGTCTGACAAGGACAATAGGTATGGATTG 412
                       ************************************************************

consensus_12868#0      GATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGGGCTCTACCTGAGCTTTCA 660
consensus_12868#1      GATTCTGTCGTAACTCATGATGGCACAAAGATGCCATGCTGG------------------ 454
                       ******************************************                  

consensus_12868#0      AGTTTCCAAGATAAATTAGGAACAGAGGCTTACGATAAGGTTGATGTCATAGGTATTGAT 720
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      GAAGCACAGTTTTTTGACGATCTTCATGATTTCTGCTGCAAAGCTGCTGACCGTGATGGA 780
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      AAAATTGTTGTAGTCGCAGGGCTAGATGGTGACTACAAAAGGAACAAATTTGGGTCAGTT 840
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      CTGGACATTATACCCTTGGCTGACTCGGTCACCAAGCTCACCGCACGCTGTGAGTTGTGC 900
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      GGTCGCCGTGCATTCTTCACGCTGAGGAAGACACGGGAAACTAAGACCGAGCTCATTGGA 960
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      GGAGCTGATGTGTACATGCCTGTATGTAGGCAACACTACCTGGATGGTCAGATTGTCATT 1020
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      GAGGCCACAAGGATTGTGCTGGATCTTGAAAAATCCAAGGTTATCCATGCTTTCAAGTGA 1080
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      GTGAATAGCTCATTGTATCCTTTTTACTTGCAAGGCTTACCATGTGTAACACTATCATCA 1140
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      TCAACCATGCAATCCATCTAGTTATCGTAGAAGATGATGGAAAGACCACAATATTCAGAG 1200
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      ACTCTCCATTAAACGATTGTAAATATGTATCAGTCCAGATTCTGTTGGGAATGAATTTTA 1260
consensus_12868#1      ------------------------------------------------------------
                                                                                   

consensus_12868#0      TCTTGGTTTGTGGAAAAAAAAAAAAAA 1287
consensus_12868#1      ---------------------------
                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)