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Oryza sativa
cluster # 12874 cluster # 12874       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12874#0 length = 1322 sequences # 7  
consensus_12874#1 length = 749 sequences # 3  
consensus_12874#2 length = 348 sequences # 1  

consensusID : consensus_12874#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1322
fasta sequence
                              [ATAAGCCAAAGCGCACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCCCTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGCGGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACC-CTCTCCCCGACTCCCACCGCAT-CTCCCTCAGGGTGACGTCACCGTACGGGAACAGCGTGCACTA-CGCGGAGAACGT-GCCGTCGGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCAC-AAGCCGCCGGTCTCCATC-GGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCAGGTCGATGTGATGGAGAT-GGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTGCGCCCTAGCTTTGTCCAGTTGAAAGTTGGAACAGTTGTAAAATGTCATCAGGTTGATCATCCCAAAAAAAAAAAATTTTTACATCACTTCTCAACTATCTTACATTTCTTTTGTCTGACGTGTCCCTGGCGGCTCTTTTTTGTTCTCCTATCCACCTCGAGTACATTCTCCTCTTTTATCCTCTTGTGGGGGGCGCGGCGACCATACCTTAAGAGGGGATAATACCCGCCATGTCGGTGGTAAAACCGGGGGGGAAAACCGTGGGCCACATTAATTGTTATACCTTTTTCTGGATGGAGTGTAAAAGGGCCCACACCTCTAAAATTCCCGTATGGATAAGCCCCCCTTGTAGTATGGGGAGGTGGGCTCCCGTTCACATCGCGCATGCGTGTTATTTTTCTTCCCCCG]

[+] EMBL AW155578             [ATAAGCCAAAGCGCACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCCCTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGCGGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACC CTCTCCCCGACTCCCACCGCAT CTCCCTCAGGGTGACGTCACCGTACGGGAACAACGTGCACTACCCCGGA AACCTGGCCGGCGGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTTTGGGCGCCCGACCAC AAGCCGCCGGTCTCCATC GGGTTCGAGTTCGACTGGAGGAGCGGCGTCCCGGCCAAAGACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK060066             [          GCGCACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCCCTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGCGGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACC CTCTCCCCGACTCCCACCGCAT CTCCCTCAGGGTGACGTCACCGTACGGGAACAGCGTGCACTA CGCGGAGAACGT GCCGTCGGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCAC AAGCCGCCGGTCTCCATC GGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCAGGTCGATGTGATGGAGAT GGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTGCGCCCTAGCTTTGTCCAGTTGAAAGTTGGAACAGTTGTAAAATGTCAT                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C71825               [             CACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCCCTCCCCGCCTCCNATCTCCGGCCATGGCCGCGCGCCGCCCCGGNTCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCG CGCGGACGGCGCGNCCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTTCNCGACAACC CTCTTCCCGACTTCCACCGNAT CTTCCTCAGGGTGACGTAACCGTACGGGAACAGCGT CACTA CGGGGAGAACGT GCCGTNGGGGAATTTNGGGTT AAGGNGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C74205               [                         CTAATACCACCACCGCCGCCCCGTGACGACCTCCCCTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCNGCCGCCGCCGTGCTCCTCCTCCTCTCGGCNGCG CGCGAACGGNGCNGACCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACC CTCTCNCCGACTCCCAACGCATNTTCCCTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BE040891             [                                                                                   ATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGTGGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGCGGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACC CTCTCCCCGACTCCCACCGCAT CTCCCTCAGGGTGACGTCACCGTACGGGAACAGCGTGCACTA CGCGGAGAACGT GCCGTCGGGGAACTTCGCGTTCACGGCGACGGAAGCCGGCGACTACCTGGGCTGCTTCTGGGCGCCCGACCACAAAGCCGCCGGTCTCCATCGGGGTTCGAGTTCGACTGGAGGAGCGGGGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAAGGGCANGTCGATGTGATGGAAATGGGAGTGGAGGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C98563               [                                                                                                                                                                                                                                                                                            gcCCCCGACCCCAATTCCCCCGACAACCTCTC CCCCGACTCCCACCGCAT CTCCTCCAGGGTGACGTCACCGTACGGGAACAGCGTGCA TA CGCGGAGAAC T GCCTTCGGGGAAATTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCAC AAGCCGCCGGTCTCCATC GGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCAGGTCGATGTGATGGAGAT GGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAA CTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTGCGCCCTAGCTTTGTCCAaaaaa                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BE040706             [                                                                                                                                                                                                                                                                                                                                                                                   TGCACTA CGCGGAGAACGT GCCGTCGGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCAC AAGCCGCCGGTCTCCATC GGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCAGGTCGATGTGATGGAGAT GGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTGCGGCCTAGCTNTGTCCAGTTGAAAGTTGGAACAGTTGTAAAATGTCATCAGGTTGATCATCCCAAAAAAAAAAAATTTTTACATCACTTCTCAACTATCTTACATTTCTTTTGTCTGACGTGTCCCTGGCGGCTCTTTTTTGTTCTCCTATCCACCTCGAGTACATTCTCCTCTTTTATCCTCTTGTGGGGGGCGCGGCGACCATACCTTAAGAGGGGATAATACCCGCCATGTCGGTGGTAAAACCGGGGGGGAAAACCGTGGGCCACATTAATTGTTATACCTTTTTCTGGATGGAGTGTAAAAGGGCCCACACCTCTAAAATTCCCGTATGGATAAGCCCCCCTTGTAGTATGGGGAGGTGGGCTCCCGTTCACATCGCGCATGCGTGTTATTTTTCTTCCCCCG]


>consensus_12874#0 ATAAGCCAAAGCGCACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCC CTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGT GGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGC GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACG AGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACT TCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACG GGAACAGCGTGCACTACGCGGAGAACGTGCCGTCGGGGAACTTCGCGTTCACGGCGACGG AGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCG GGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGA AGGGGCAGGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTA TCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGC AAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCG CGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCT TCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTG TCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAAT TATATTTAACCGTGCGCCCTAGCTTTGTCCAGTTGAAAGTTGGAACAGTTGTAAAATGTC ATCAGGTTGATCATCCCAAAAAAAAAAAATTTTTACATCACTTCTCAACTATCTTACATT TCTTTTGTCTGACGTGTCCCTGGCGGCTCTTTTTTGTTCTCCTATCCACCTCGAGTACAT TCTCCTCTTTTATCCTCTTGTGGGGGGCGCGGCGACCATACCTTAAGAGGGGATAATACC CGCCATGTCGGTGGTAAAACCGGGGGGGAAAACCGTGGGCCACATTAATTGTTATACCTT TTTCTGGATGGAGTGTAAAAGGGCCCACACCTCTAAAATTCCCGTATGGATAAGCCCCCC TTGTAGTATGGGGAGGTGGGCTCCCGTTCACATCGCGCATGCGTGTTATTTTTCTTCCCC CG



consensusID : consensus_12874#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 749
fasta sequence
                              [GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACGGGAACAGCGTGCACTACGCGGAGAACGTGCCGTC-GGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCGGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCA-GGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGA-ACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTAC-TTTTTTTTGTGTCAAGTTTATGTTACTTGTAAGCAACGATGTGTATTATACTCTATAAAGTATATTTAACCGTGCGCCCTAGCTTTGTCCAAAATTATAG]

[-] EMBL CB635024             [GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACGAGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACTTCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACGGGAACAGCGTGCACTACGCGGAGAACGTGCCGTC GGGGAACTTCGCGTTCACGGCGACGGAGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCGGGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGAAGGGGCA GGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGA ACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTAC TTTTTTTTGTGTCAAGTTTATGTTACTTGTAAGCAACGATGTGTATTATACTCTATAAAGTATATTTAACCGTGCGCCCTAGCTTTGTCCAAAATTATAG]
[+] EMBL BI794906             [                                                                                                                                                                                                   ACGCGGAGAACGT CCCTCGGGGGAACTTCGCGTTCAC GCGAC GA GCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCGGGTTCGAGTTCGACTGGAGGAGCGGCGTC CGGCCAAGGACTGGTCCAACGTCGCCCAGAAGGGGCACGGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGA AC AGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCC AGATC AAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTAC TTTTTTTTGTGTCAAGTTTATGTTACTTGTAAGC ACGATGTGTATTATACTCTATAAATTATATTTAACCGTGaaaaa                     ]
[+] EMBL OSS11227A            [                                                                                                                                                                                                                                                                                                                                             GCCAAGGACTGNNCCAACGNCGCCAAGAAGGGGCA GGTCGATGTNATGGAGATGGAGTTGAAGAAGCTAGANGAAACCATCAAATCTATCCATGAAGAAATGTTTTACCTACGTNAAAGGGAGGAGGAAATGCAGAACCTGAGACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCGCGGGGCTGCAGCTGTTGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCTTCTCCAAGATCAAAAGANTATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTTGTGTCAAGTTTATG                                                                              ]


>consensus_12874#1 GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACG AGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACT TCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACG GGAACAGCGTGCACTACGCGGAGAACGTGCCGTCGGGGAACTTCGCGTTCACGGCGACGG AGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCG GGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGA AGGGGCAGGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTA TCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGC AAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCG CGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCT TCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTG TCAAGTTTATGTTACTTGTAAGCAACGATGTGTATTATACTCTATAAAGTATATTTAACC GTGCGCCCTAGCTTTGTCCAAAATTATAG



consensusID : consensus_12874#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 348
fasta sequence
                              [CTATCCATNAAGAAATGTTTTACCTACGTGAAAGGGAGGAGNAAATGCAGAACCTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCNCGGGGCTNCAGCTGTGGCACCTGAANACCTTTTTTGAGAGAAAGAANCTTCTGTAGTTNTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCNAGTTTATGTTGCTTANCNATTACTTGTAANCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTCCTCCANAGCTTTGTCCCGCGTCCGGANTAGT]

[+] EMBL AU197876             [CTATCCATNAAGAAATGTTTTACCTACGTGAAAGGGAGGAGNAAATGCAGAACCTGAACAAGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCNCGGGGCTNCAGCTGTGGCACCTGAANACCTTTTTTGAGAGAAAGAANCTTCTGTAGTTNTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTGTCNAGTTTATGTTGCTTANCNATTACTTGTAANCAACGATGTGTATTATACTCTATAAATTATATTTAACCGTCCTCCANAGCTTTGTCCCGCGTCCGGANTAGT]


>consensus_12874#2 CTATCCATNAAGAAATGTTTTACCTACGTGAAAGGGAGGAGNAAATGCAGAACCTGAACA AGCAAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCG TCNCGGGGCTNCAGCTGTGGCACCTGAANACCTTTTTTGAGAGAAAGAANCTTCTGTAGT TNTTCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTT GTGTCNAGTTTATGTTGCTTANCNATTACTTGTAANCAACGATGTGTATTATACTCTATA AATTATATTTAACCGTCCTCCANAGCTTTGTCCCGCGTCCGGANTAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12874#0      ATAAGCCAAAGCGCACGCCAAGTCGCTAATACCACCACCGCCGCCCCGTGACGACCTCCC 60
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      CTCCCCGCCTCCGATCTCCGGCCATGGCCGCGCGCCGCCCCGGATCGCCCGCTCCCAGGT 120
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      GGGCGCCATGGCCCCTCCTCGCCGCCGCCGCCGTGCTCCTCCTCCTCTCGGCCGCGCCGC 180
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACG 240
consensus_12874#1      GGACGGCGCGCGCCCTCCGGTTCGACCTCGAGTCCGGCCACACCAAGTGCATCTCCGACG 60
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      AGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACT 300
consensus_12874#1      AGATCAAGGTCAACTCCATGGTCGTCGGGAAGTACCACGTCGTCGGCCCCGACCCCAACT 120
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      TCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACG 360
consensus_12874#1      TCCCCGACAACCCTCTCCCCGACTCCCACCGCATCTCCCTCAGGGTGACGTCACCGTACG 180
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      GGAACAGCGTGCACTACGCGGAGAACGTGCCGTCGGGGAACTTCGCGTTCACGGCGACGG 420
consensus_12874#1      GGAACAGCGTGCACTACGCGGAGAACGTGCCGTCGGGGAACTTCGCGTTCACGGCGACGG 240
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      AGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCG 480
consensus_12874#1      AGGCCGGCGACTACCTGGCCTGCTTCTGGGCGCCCGACCACAAGCCGCCGGTCTCCATCG 300
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      GGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGA 540
consensus_12874#1      GGTTCGAGTTCGACTGGAGGAGCGGCGTCGCGGCCAAGGACTGGTCCAACGTCGCCAAGA 360
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      AGGGGCAGGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTA 600
consensus_12874#1      AGGGGCAGGTCGATGTGATGGAGATGGAGTTGAAGAAGCTAGAAGAAACCATCAAATCTA 420
consensus_12874#2      ---------------------------------------------------------CTA 3
                                                                                ***

consensus_12874#0      TCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGC 660
consensus_12874#1      TCCATGAAGAAATGTTTTACCTACGTGAAAGGGAGGAGGAAATGCAGAACCTGAACAAGC 480
consensus_12874#2      TCCATNAAGAAATGTTTTACCTACGTGAAAGGGAGGAGNAAATGCAGAACCTGAACAAGC 63
                       ***** ******************************** *********************

consensus_12874#0      AAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCG 720
consensus_12874#1      AAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCG 540
consensus_12874#2      AAACGAACTCAAGAATGGCATGGCTCGGGTTCCTCTCACTCGGAATCTGCCTATCCGTCN 123
                       *********************************************************** 

consensus_12874#0      CGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCT 780
consensus_12874#1      CGGGGCTGCAGCTGTGGCACCTGAAGACCTTTTTTGAGAGAAAGAAGCTTCTGTAGTTCT 600
consensus_12874#2      CGGGGCTNCAGCTGTGGCACCTGAANACCTTTTTTGAGAGAAAGAANCTTCTGTAGTTNT 183
                       ******* ***************** ******************** *********** *

consensus_12874#0      TCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTG 840
consensus_12874#1      TCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTG 660
consensus_12874#2      TCTCCAAGATCAAAAGAATATATTGCAGCACGAAAGCGGCTAGGTGTACTTTTTTTTGTG 243
                       ************************************************************

consensus_12874#0      TCAAGTTTATGTTGCTTAGCGATTACTTGTAAGCAACGATGTGTATTATACTCTATAAAT 900
consensus_12874#1      TCAAGTTTATGTT-----------ACTTGTAAGCAACGATGTGTATTATACTCTATAAAG 709
consensus_12874#2      TCNAGTTTATGTTGCTTANCNATTACTTGTAANCAACGATGTGTATTATACTCTATAAAT 303
                       ** **********           ******** ************************** 

consensus_12874#0      TATATTTAACCGTGCGCCCTAGCTTTGTCCAGT-TGAAAGTTGGAACAGTTGTAAAATGT 959
consensus_12874#1      TATATTTAACCGTGCGCCCTAGCTTTGTCCA------AAATTATAG-------------- 749
consensus_12874#2      TATATTTAACCGTCCTCCANAGCTTTGTCCCGCGTCCGGANTAGT--------------- 348
                       ************* * **  **********           *                  

consensus_12874#0      CATCAGGTTGATCATCCCAAAAAAAAAAAATTTTTACATCACTTCTCAACTATCTTACAT 1019
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      TTCTTTTGTCTGACGTGTCCCTGGCGGCTCTTTTTTGTTCTCCTATCCACCTCGAGTACA 1079
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      TTCTCCTCTTTTATCCTCTTGTGGGGGGCGCGGCGACCATACCTTAAGAGGGGATAATAC 1139
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      CCGCCATGTCGGTGGTAAAACCGGGGGGGAAAACCGTGGGCCACATTAATTGTTATACCT 1199
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      TTTTCTGGATGGAGTGTAAAAGGGCCCACACCTCTAAAATTCCCGTATGGATAAGCCCCC 1259
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      CTTGTAGTATGGGGAGGTGGGCTCCCGTTCACATCGCGCATGCGTGTTATTTTTCTTCCC 1319
consensus_12874#1      ------------------------------------------------------------
consensus_12874#2      ------------------------------------------------------------
                                                                                   

consensus_12874#0      CCG 1322
consensus_12874#1      ---
consensus_12874#2      ---
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)