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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1261 fasta sequence
[CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT-GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCTCTTTGGATTCTATTCAATGCAGTCAAATCTAAAATCAT]
[+] EMBL CF329123 [CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCTGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTTAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAA ]
[+] EMBL AK121988 [ catcctgCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCTCTTTGGATTCTATTCAATGCAGTCAAATCTAAAATCAT]
[+] EMBL CF327332 [ GCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGCGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAG ]
[+] EMBL C28235 [ GGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAG GGAGGCTTCCGCCGCCGG GTACCGGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTTAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATAC ]
[+] EMBL CA998462 [ CCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTAT ]
[+] EMBL BP184854 [ CAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATAT GGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATAT ]
consensusID : consensus_12878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 837 fasta sequence
[ACCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCATCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCT-CCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG-AT-CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAAAAACACTGTCATGCCGTTCGTAGC]
[+] EMBL C97579 [ACCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCATCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCATGGACAAGCTCCCAATGGTGTGTCCATTGATCTAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTATGAAACATCACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCT CCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG AT CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAA ]
[-] EMBL CF309155 [ CAGCATGGAATGCAACCAGATATGACTGAAAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTCTTGGATTCTTCAGTAGCTAAATGGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTG AT CCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCACAGCAGTACGTGATTTTAGTTCTCAAAAAAAAAAAAAAACACTGTCATGCCGTTCGTAGC]
[-] EMBL AU077987 [ gccncagAGTCTAAAAACAAGAAGATGATGAT GAATTGCAGGATTGCATTTGGNCTATTTTCGCAATCC TTGCAATTTCTT GATGCTTCAGTAGCTTAATAGTTCATC GATTAGCTTGCGACAT ATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGCATGCCAA ]
consensusID : consensus_12878#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCCCATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGGTGTGTCCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAAC]
[+] EMBL CF309154 [GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCCCATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTATGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAGGCCACGGTTTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACCAAATATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGGTGTGTCCCATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAAC]
consensusID : consensus_12878#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence
[AGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTTTTGGATTTTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCCCAGCAGTAAAAAAAAAAAAAA]
[-] EMBL CF329122 [AGGATGAAACCAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGCTGGAATTGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGGGACGAGAACGACAAGCTCCGTCAAATGCTCATAGAAGAACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAAATGGAGTGAAGGCCTACAACCCATGCTCGGACTGCTTTGATTGCCGGAGGCGAAGTCGAAAAACAAGAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTATTTTCGCAATCCTTTGCAATTTTTTGGATTTTTCAGTAGCTAAATAGTTCATCGGATTAGCTTTCGACATAATATCCTCAGCAGAAGATCCACTCTTGTTGTTCAGGCCAGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTCTGTGCTGAACATGCGCAGACTGATAGCATCCCAGCAGTAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 CTGCCATGGACTGAAGGAGTAGAAAATTTTTCCGCCGGCGGCTACCGCGGGCGGTGCTCG 60
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 ACTCGACCTCGATGGCGAGCTCGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCGGATGG 120
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 AGAACCCCTTCAGCGTGAAGGTGCTCCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCG 180
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 TCGGCATCGGCGTCGGCCGCCCCATCTACCTAGGTGTCATACCGGGGCTTAATCAAGTTA 240
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 TGACCGCAACAAGGGGCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCG 300
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ------------------------------------------------------------
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 CTCTAAGGAAGTCAGGGTTAAAGAACATTGAAGCAGGCATTGGCTGTGGAGTTGGTATAG 360
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 -----------------------------------------------------------A 1
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 GCCACGGTTTTGGAATAGGAATTGCATTGAAGCCACAAGTAATTCATGGAATTCAGTCAA 420
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 CCGTTGGGGACTTATGGTCTAAGTTCACTTCTAGGCTGAAGGTTCCCCCAACTTTNGTCA 61
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 CCGTTGGAGAACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTG-TCA 479
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 TCTGCCCCAAATTATGGCTGGTTCTGTGCCTAGCA-TGGACAAGCTCCCAATGGTGTGTC 120
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 TCTGCACCAAAT-ATGGCTGGTTCTGTGCCTAGCAATGGACAAGCTCCCAATGGTGTGTC 538
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 CATTGATCTAA-GGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTA-TGAAACATC 178
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 CATTGATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATACAAGTAATGAAACATC 598
consensus_12878#2 ------------------------------------------------------------
consensus_12878#1 ACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGA 238
consensus_12878#3 ------------------------------------------------------------
consensus_12878#0 ACAAGTAAAACCAGCTCCTGGGTTGCAAAGCCAGCATGGAATGCAACCAGATATGACTGA 658
consensus_12878#2 ---------------GCAATAAGCCCAAGACCCAACGGCGGGCTGACGGCTCACAATTCC 45
consensus_12878#1 AAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCC-TGTTCCAGGATGAAAC 297
consensus_12878#3 --------------------------------------------------AGGATGAAAC 10
consensus_12878#0 AAGTCGGACTGAAAAGGTTGTTGCCAACTTTCTACAGTCTCCCCTGTTCCAGGATGAAAC 718
consensus_12878#2 CATCCTGCCGCCGGCGGCTACCGCGGGCGGTGCTCGACTCGAC---CTCGATGGCGAGCT 102
* * **
consensus_12878#1 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 356
consensus_12878#3 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 69
consensus_12878#0 CAAGATGGACATCAGAGATGTGGCTAGAAATTCACATGGGATGGATAATGTGC-TGGAAT 777
consensus_12878#2 CGCGGGAGCGGAGGCTTCCGCCGCCGGCGTACCTGATGGAGAACCCCTTCAGCGTGAAGG 162
* * * * ** * * **** * ** ** *
consensus_12878#1 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 415
consensus_12878#3 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 128
consensus_12878#0 TGTTGCTGAAGCACCAAAGAATTATTGACGAACTGCGG-GACGAGAACGACAAGCTCCGT 836
consensus_12878#2 TGCT-CCAGGTCTTCACCGGCTTCGGCGTCGGCTGCGGCGTCGGCATCGGCGTCGGCCGC 221
** * * * ** * ** ****** * ** * ** * ***
consensus_12878#1 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 473
consensus_12878#3 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 186
consensus_12878#0 CAAATGCTCATAGAAG--AACTCAAGGTTTCACCTTCCAAGTTACAATTAGATCATAAAA 894
consensus_12878#2 CCCATCTACCTAGGTGTCATACCGGGGCTTAA----TCAAGTTATGACCGCAACA-AGGG 276
* ** * *** * * * ** ** * ******* * * ** *
consensus_12878#1 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 522
consensus_12878#3 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 235
consensus_12878#0 ATGGAGTGAAGGCCT-----------ACAACCCATGCTCGGACTGCTTTGATTGCCGGAG 943
consensus_12878#2 GCGCAACGGATGCCTTTTCAGGCGTAACAAGGCATGTTAATTCCGCTCTAAG----GAAG 332
* * * * **** **** **** * * *** * * * **
consensus_12878#1 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 579
consensus_12878#3 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 292
consensus_12878#0 GCGAAGTCGAAAAACAA-GAAGATGATAATGGAATTGCAGGATTGCATTTTGGCTAT--T 1000
consensus_12878#2 TCAGGGTTAAAGAACATTGAAGCAGGCATTGG--CTGTGGAGTTG-GTATAGGCCACGGT 389
* ** ** **** **** * * *** ** * *** * * *** * *
consensus_12878#1 TTCGCAATCCT--TTGCAATT---TCTTGGATTCTTCA-GTAGCTAAATAGTTCATCGGA 633
consensus_12878#3 TTCGCAATCCT--TTGCAATT---TTTTGGATTTTTCA-GTAGCTAAATAGTTCATCGGA 346
consensus_12878#0 TTCGCAATCCT--TTGCAATT---TCTTGGATTCTTCA-GTAGCTAAATAGTTCATCGGA 1054
consensus_12878#2 TTTGGAATAGGAATTGCGTTGAAGCCACAAGTAATTCATGGAATTCAGTCAACCGTTGGA 449
** * *** **** * * **** * * * * * * * ***
consensus_12878#1 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 686
consensus_12878#3 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 399
consensus_12878#0 TTAGCTTTCGACATAATA---TCCTCAGCAGAAGA----TCCACTCTTGTTGTTCAGGCC 1107
consensus_12878#2 G-AACTTATGTCTAAGTTCACTTCTAGGCTGAAGGATACCCCAACTTTGTCATCTGCACC 508
* *** * * * * * ** ** **** *** **** * **
consensus_12878#1 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 746
consensus_12878#3 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 459
consensus_12878#0 AGTTATGTTACCTATCTCCTGAACATTCGTGAACACTTGATCCAATTGATGCGTTACTTC 1167
consensus_12878#2 AAATATG--GCTGGTTCTGTGCCTAGCAATGGACAAGCT-CCCAATGGGTGTGTCCCATT 565
* **** * * ** * ** *** ***** * ** ** * *
consensus_12878#1 TGTGCTGAACATGCGCAGACTGATAGCA-TCACAGCAGTACGTGATTTTAGTTCTCAAAA 805
consensus_12878#3 TGTGCTGAACATGCGCAGACTGATAGCA-TCCCAGCAGTA----------------AAAA 502
consensus_12878#0 TGTGCTGAACATGCGCAGACTGATAGCA-TCACAGCAGTACGTGATTTTAGTTCTCTCTT 1226
consensus_12878#2 GATCTAAAGGCTAAGACCACGAAAAGTAATTTCCACCATA---------------CAAGT 610
* * * * ** * ** * * * * **
consensus_12878#1 AAAAAAAAAAACACTGTCATGCCGTTCGTAGC--- 837
consensus_12878#3 AAAAAAAAA-------------------------- 511
consensus_12878#0 TGGATTCTATTCAATGCAGTCAAATCTAAAATCAT 1261
consensus_12878#2 AATGAAAC--------------------------- 618
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||