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Oryza sativa
cluster # 12887 cluster # 12887       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12887#0 length = 1040 sequences # 4  
consensus_12887#1 length = 672 sequences # 4  
consensus_12887#2 length = 542 sequences # 3  

consensusID : consensus_12887#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1040
fasta sequence
                              [GCAGTACTAGATCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGGGACTGTCGACGTCGGGAAGCTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGTCAAGATTGAATCAGTTGTGCCGGATGATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAAGAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAGAACAACGAAAATGGAAGAGAGACAAAGAAAATCTCAACTCAAAGCTCGAAAAAAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK103013             [GCAGTACTAGATCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGGGACTGTCGACGTCGGGAAGCTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGTCAAGATTGAATCAGTTGTGCCGGATGATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAAGAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAGAACAACGAAAATGGAAGAGAGACAAAGAAAATCTCAACTCAAAGCTCGAAAAAAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATT                                                   ]
[+] EMBL AU160905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTNACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAACAAAAAAAAAAAAAA                            ]
[+] EMBL AU088562             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cnGAAGGGATGGATNACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGNCCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGNGGTTCGTCNCCNCGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTANCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGNGTTTTCTCNCTGTTTGTTGTGATGTTNTAGCATAATAAATAAAGCTGCATTATTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA754926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA             ]


>consensus_12887#0 GCAGTACTAGATCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATAT CTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTA GAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAA GTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGGGACTGTCGACGTCGGGAAG CTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGTCAAGATTGAATCAGTTGTGCCGGAT GATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAAGAAACAGAAG GAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAGAA CAACGAAAATGGAAGAGAGACAAAGAAAATCTCAACTCAAAGCTCGAAAAAAAGACAAAG GAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAAC ACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTG CAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGATGGATAACTACAACTTCAACT AAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCAT AAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTG ATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCAC TGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTT GTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGA TGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA



consensusID : consensus_12887#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 672
fasta sequence
                              [CAGCGTGANTTANGANTCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGG-GACTGTCGACGTCGGGAAGCTCTATGAGCGC-CTCAAGAAAAT-GTCATCCAGTGTCAAGA-TTG-AATCAGTTGTGCCGGATGATCTAATGGCG-AAAAT-GGATCGATACAAAAAGGACCTTCAGAACATGAAGAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAG-AACAACG-AAATGGAAGAGNG-C-AAG--AAT-TC-ACTCAAGTCTCGAAAAAAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGGTTTTTGTCTGTTGCTAAACACTTGATTTGGACTGA]

[+] EMBL C27623               [CAGCGTGANTTANGANTCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGG GACTGTCGACGTCGGGAAGCTCTATGA CGCACTCAAGAAAAT GTCATCCAGTGTCAAGA TTG AATCAGTTGTGCCGGATGATCTAATGGCG AAAAT GGATCGATACAAAAAGGACCTTCAGAACATGAAGANACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAGAAACAACG ATATGGAAGAn                                                                                                                                                                                                                                             ]
[+] EMBL C28530               [                      TCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGG GACTGTCGACGTCGNGAAGCTCTATGAGCGC CTCAAGAAAAT GTCATCCAGTGTCAAGA TTG AATCAGTTGTGCCGGATGATCTAATGGCG AAAAT GGATCGATACAAAAAGG CCTTCAG ACATG AG AACAGNAGGAAG TGTCGAG CAAAG AAATC AACANGAGG AGG T CAAG TTCT CA NAAG  AC ACG  AATGG AG GNG C AAG  AAT TC ACTCAAGTC                                                                                                                                                                                                                   ]
[+] EMBL OSC100761            [                          GTCTCTGACTTCCTCCCCATCTCTTTTCACCATATATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACGACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGNTAATTTCAAAGTAAAAGTAGATGGCAGCAGTTTGNAGGTGGACGTTCCAGGNGACTNTCGACGTCGGGAAGCTCTATGAGCGC CTCAAGNAAATNGTCATCCAGTGTCAAGATTTGNAATCAGTTNTGCCGGATGATCTAATGGCGAAAAATGGGATCGAT                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF308388             [                                                                                                                                                                                                                                                        CTATGAGCGC CTCAAGAAAAT GTCATCCAGTGTCAAGA TTG AATCAGTTGTGCCGGATGATCTAATGGCG AAAAT GGATCGATACAAAAAGGACCTTCAGAACATGAAGAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGCAAG AACAACGAAAATGGAAGAGAGACAAAGAAAATCTCAACTCAAAGCTCGAAAAAAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGGTTTTTGTCTGTTGCTAAACACTTGATTTGGACTGA]


>consensus_12887#1 CAGCGTGANTTANGANTCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATA TATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACG ACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATT TCAAAGTAAAAGTAGATGGCAGCAGTTTGAAGGTGGACGTGCCAGGGACTGTCGACGTCG GGAAGCTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGTCAAGATTGAATCAGTTGTGC CGGATGATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAAGAAAC AGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCTCCAGC AAGAACAACGAAATGGAAGAGNGCAAGAATTCACTCAAGTCTCGAAAAAAAGACAAAGGA GACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGAATATCTCAACAC AAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAACAAGAAATTGCA GCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGGTTTTTGTCTGTTGCTAAACACTT GATTTGGACTGA



consensusID : consensus_12887#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 542
fasta sequence
                              [ACCGGATTTCAGGAATCTTGGTGGTGTTTCGCACGGAATTATTTAAAATTTTGAAAGAAACTTGAAAATCTTGGACCATATATTAGCTTGCTGGGATTCGGAAATTACCAAAATTTCAAACCCTGATATAATTTTCGGCAATCGTGCGGCTGATTTTTGGTCTGCGTTTTAACTGCAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAA]

[-] EMBL CF308389             [ACCGGATTTCAGGAATCTTGGTGGTGTTTCGCACGGAATTATTTAAAATTTTGAAAGAAACTTGAAAATCTTGGACCATATATTAGCTTGCTGGGATTCGGAAATTACCAAAATTTCAAACCCTGATATAATTTTCGGCAATCGTGCGGCTGATTTTTGGTCTGCGTTTTAACTGCAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAA]
[+] EMBL CF309095             [                                                                                                                                                                                                                                                                                                                                                               GCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAA ]
[-] EMBL CF309094             [                                                                                                                                                                                                                                                                                                                                                                CACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAA]


>consensus_12887#2 ACCGGATTTCAGGAATCTTGGTGGTGTTTCGCACGGAATTATTTAAAATTTTGAAAGAAA CTTGAAAATCTTGGACCATATATTAGCTTGCTGGGATTCGGAAATTACCAAAATTTCAAA CCCTGATATAATTTTCGGCAATCGTGCGGCTGATTTTTGGTCTGCGTTTTAACTGCAGGG ATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCA TGGTATGCATCACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGA GGTTCGTCACCACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACA ACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATA CATATGTGTGCTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGA GTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAA AA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12887#0      -----GCAGTACTAGATCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATA 55
consensus_12887#1      CAGCGTGANTTANGANTCTTGCTCTAGTCTCTGACTTCCTCCCCATCTCTTTTCACCATA 60
consensus_12887#2      -ACCGGATTTCAGGAATCTTGGTGGTGTTTCGCACGGAATT---ATTTAAAATTTTGAAA 56
                                *      ***** *   ** **  **    *    ** *    *    * *

consensus_12887#0      TATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACG 115
consensus_12887#1      TATATCTGAAGCAAATGGGAGACAAGAAACTTACGAAGCTCAAGGTTCGGGGTGCAAACG 120
consensus_12887#2      GAAACTTGAA---AATCTTGGACCATATA-TTAGCTTGCTGGGATTCGGAAATTACCAAA 112
                        * *  ****   ***    *** * * * ***    ***     *  *   *    *  

consensus_12887#0      ACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATT 175
consensus_12887#1      ACGTAGAGGTCAAGAGCGTACTTCGTCAAGAGTTCAAAGAATCTGTCGACCAGGATAATT 180
consensus_12887#2      ATTTCAAACCCTGATATAATTTTCGGCAATCGTGCGGCTGATTT-TTGGTCTGCGT--TT 169
                       *  *  *   *          **** ***  ** *     ** * * *  * *  *  **

consensus_12887#0      TCAAAGTAAAAGTAGATGGCAGCAGTTTGAA----GGTGGACGTGCCAGGGACTGTCGAC 231
consensus_12887#1      TCAAAGTAAAAGTAGATGGCAGCAGTTTGAA----GGTGGACGTGCCAGGGACTGTCGAC 236
consensus_12887#2      TAACTGCAGGGATGGATAACTACAACTTCAACTAAGTTGGACAGTTTCGAATCTGTGGAC 229
                       * *  * *    * ***  *  **  ** **    * *****      *   **** ***

consensus_12887#0      GTCGGGAAGCTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGT-CAAGATTGAATCAGT 290
consensus_12887#1      GTCGGGAAGCTCTATGAGCGCCTCAAGAAAATGTCATCCAGTGT-CAAGATTGAATCAGT 295
consensus_12887#2      CATAATCATCATGGTATGCATCACA-GAGTGCATAAGGAGGTGCACAGGCATGAATTTCA 288
                              * *    *  **  * ** **     * *    ***  ** *  *****    

consensus_12887#0      TGTGCCGGATGATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAA 350
consensus_12887#1      TGTGCCGGATGATCTAATGGCGAAAATGGATCGATACAAAAAGGACCTTCAGAACATGAA 355
consensus_12887#2      CATGCATCAAGAGGT--TCGTCACCACGG--TAATGTGATGG----CATTGGAGAATGAT 340
                         ***   * **  *  * *  *  * **    **   *       * *  **  **** 

consensus_12887#0      GAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCT 410
consensus_12887#1      GAAACAGAAGGAAGCTGTCGAGTCAAAGCAAATCAAACAAGAGGAAGGATACAAGCTTCT 415
consensus_12887#2      GGTAGGAGGGCGCACTAACAACCCAGGCTGGAATATTACCACTGAGGAAATTAAATTTAT 400
                       *  *     *    **  * *  **      *  *        ** * *   **  ** *

consensus_12887#0      CCAGCAAGAACAACGAAAATGGAAGAGAGACAAAGAAAATCTCAACTCAAAGCTCGAAAA 470
consensus_12887#1      CCAGCAAGAACAACGAAA-TGGAAGAGNG-CAAGAA-----TTCACTCAAGTCTCGAAAA 468
consensus_12887#2      CCTCCTACCAAAACTATA-TACATATGTG-TGCTGACGTGGTTTGTGCTATGTTTGTGTG 458
                       **  * *  * *** * * *  *   * *      *     *     * *   * *    

consensus_12887#0      AAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGA 530
consensus_12887#1      AAAGACAAAGGAGACCAAAGATGCCAAGGAAGAACTCAAAATCACAAAGAGAGAGAAGGA 528
consensus_12887#2      TGGTTTACTTGCCTTTCTTGGAGTTTTCTCTCTGTTTGTTGTGATGTTCTAGCATAATAA 518
                             *   *        *  *            *     * *         * **  *

consensus_12887#0      ATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAA 590
consensus_12887#1      ATATCTCAACACAAAACTTGAGACAAAGAGGGAAGAGAACAAGCGCCTCGATGAGGAAAA 588
consensus_12887#2      ATAAAGCTGCATTA---TTGAGAAAAA--------------------------------- 542
                       ***   *  **  *   ****** ***                                 

consensus_12887#0      CAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGATGGATAACTAC 650
consensus_12887#1      CAAGAAATTGCAGCGAAAAATCAAGGATCTACAGGAAATGCAGAAGGGGTTTTTGTCTGT 648
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      AACTT--CAACTAAGTTGGACAGTTTCGAATCTGTGGACCATAATCATCATGGTATGCAT 708
consensus_12887#1      TGCTAAACACTTGATTTGGACTGA------------------------------------ 672
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      CACAGAGTGCATAAGGAGGTGCACAGGCATGAATTTCACATGCATCAAGAGGTTCGTCAC 768
consensus_12887#1      ------------------------------------------------------------
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      CACGGTAATGTGATGGCATTGGAGAATGATGGTAGGAGGGCGCACTAACAACCCAGGCTG 828
consensus_12887#1      ------------------------------------------------------------
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      GAATATTACCACTGAGGAAATTAAATTTATCCTCCTACCAAAACTATATACATATGTGTG 888
consensus_12887#1      ------------------------------------------------------------
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      CTGACGTGGTTTGTGCTATGTTTGTGTGTGGTTTACTTGCCTTTCTTGGAGTTTTCTCTC 948
consensus_12887#1      ------------------------------------------------------------
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      TGTTTGTTGTGATGTTCTAGCATAATAAATAAAGCTGCATTATTGAGAAAAAAAAAAAAA 1008
consensus_12887#1      ------------------------------------------------------------
consensus_12887#2      ------------------------------------------------------------
                                                                                   

consensus_12887#0      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1040
consensus_12887#1      --------------------------------
consensus_12887#2      --------------------------------
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)