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Oryza sativa
cluster # 12897 cluster # 12897       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12897#0 length = 1317 sequences # 9  
consensus_12897#1 length = 956 sequences # 2  

consensusID : consensus_12897#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1317
fasta sequence
                              [ATCCTCGCCCCCTCTTTCTCTCTAATCTCCGCCAAGGCGATGGCGGATTCGAAGGGGAGCGGCGGCGCCGCCGGCGACAAGCCCGGCGCCGACGCGAGCCCCGCCACGAATCCGGCCCCGCCAGCTGCCGCCGTGGCCGTCGCCGCTGCGGCCGCGGACGCCGGAGGGGACGACGACGTGGCCGCGGCCGCGGAGGCGCGGCGGCCGTTCACGGCGCTCAGCCAGGTCGACGCCGACCTCGCCCTGGCCCGCGTGCTCCAGGAGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGAGGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCCGGGAGCTACGAGTACGACGACGAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCACCTCCGCGTCCACCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAGCGCGAAGTAGCCG-CGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAGCCTGTAGAGGAGCATGCGAA-TGAT--CCACAGG-ATGCGT-GGCAAG-AGGTT-GA-CCCAG--ATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA-CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT-GGGGGCCTCATGGC-TGTTGTATGATCCATAAATGTACAATGG-TTATATTATT-AT-ATTATATA-TTGCTAGCCA-TTCTTTTTACTAAAAAAAAAAA]

[+] EMBL AK069888             [ATCCTCGCCCCCTCTTTCTCTCTAATCTCCGCCAAGGCGATGGCGGATTCGAAGGGGAGCGGCGGCGCCGCCGGCGACAAGCCCGGCGCCGACGCGAGCCCCGCCACGAATCCGGCCCCGCCAGCTGCCGCCGTGGCCGTCGCCGCTGCGGCCGCGGACGCCGGAGGGGACGACGACGTGGCCGCGGCCGCGGAGGCGCGGCGGCCGTTCACGGCGCTCAGCCAGGTCGACGCCGACCTCGCCCTGGCCCGCGTGCTCCAGGAGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGAGGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCCGGGAGCTACGAGTACGACGACGAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCACCTCCGCGTCCACCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAGCGCGAAGTAGCCG CGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAGCCTGTAGAGGAGCATGCGAA TGAT  CCACAGG ATGCGT GGCAAG AGGTT GA CCCAG  ATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGATCCATAAATGTACAATGG TTATATTATT AT ATTATATA TTGCTAGCCA TTCTTT                ]
[-] EMBL BI807662             [                                                                                                                                                                                                      CGGCGGCCGTTCACGGCGCTCAGCCAGGTCGACGCCGACCTCGCCCTGGCCCGCGTGCTCCAGGAGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGAGGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCTGGGAGCTACGAGTACGACGACGAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCACCTCCGCGTCCACCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAGCGCGAAGTAGCCGCCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAGCCTGTA AGGAGCATG GAATTGATTCCCACAGGAATGCGTGGGAAAGAAGGTTGGACCCCAGAAATGAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSC26751             [                                                                                                                                                                                                                                                                      tGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGAGGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCCGGGAGCTACGAGTACGACGACGAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCANCTCCGCGTCCACCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATTCACGA CTCTTCAGGATtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB000732             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             T GGCAAG AGGTT GA CCCAG  ATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGAT                                                                          ]
[+] EMBL BI798389             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTAACTTACAA GCAGAAGGTGTCCAAGAT GC ACACAGAGC ATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACC ATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCACCTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCTGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGATCCATAAATGTACAATGG TTATATTATT AT ATTATATA TTGCTAGCCA TTC TTTTACTAcctcaaaa  ]
[+] EMBL CF329564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGATCCATAAATGTACAATGG TTATATTATT AT ATTATATA TTGCTAGCCA TTC TTTTACTAAAAAA     ]
[+] EMBL AU065985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGATCCATAAATGTACAATGG TTATATTATT AT ATTATATATTTGCTAGNCA TTCTTTTTACTAAAAAAAAAAA]
[+] EMBL AU065897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCANATNGGACAGCAACCAGGCATGACCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGNTATGCTCTGCATTCCCTGTGGGGGGCCTCATGGCTTGTTGTATGATCNATAAATGTACAATGGNTTATATTATTNATAATTATATA TTGCTAGNCATTTCTTTTTAC            ]
[-] EMBL AU225799             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ccgctCAATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATCTTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCA CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTGCCGCTATGCTCTGCATTCCCTGT GGGGGCCTCATGGC TGTTGTATGATCCATAAATGTACAATGG TTATATTATT AT ATTATAgcggc                               ]


>consensus_12897#0 ATCCTCGCCCCCTCTTTCTCTCTAATCTCCGCCAAGGCGATGGCGGATTCGAAGGGGAGC GGCGGCGCCGCCGGCGACAAGCCCGGCGCCGACGCGAGCCCCGCCACGAATCCGGCCCCG CCAGCTGCCGCCGTGGCCGTCGCCGCTGCGGCCGCGGACGCCGGAGGGGACGACGACGTG GCCGCGGCCGCGGAGGCGCGGCGGCCGTTCACGGCGCTCAGCCAGGTCGACGCCGACCTC GCCCTGGCCCGCGTGCTCCAGGAGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGA GGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCCGGGAGCTACGAGTACGACGAC GAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCACCTCCGCGTCCACCACCACGAG CACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGC GAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTA GACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAG CGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAG CCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGACCCAGATGAG TATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTC TCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGAT GGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATT GCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAAT AAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAGGCATGACCA ATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCATC TTGTAATGTTGGGGAGAAGGCAGATAAAACTTTCGGACACATGCGAGGGACCAGCACTAT GATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTACTCTGTTTGCCCGTG CCGCTATGCTCTGCATTCCCTGTGGGGGCCTCATGGCTGTTGTATGATCCATAAATGTAC AATGGTTATATTATTATATTATATATTGCTAGCCATTCTTTTTACTAAAAAAAAAAA



consensusID : consensus_12897#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 956
fasta sequence
                              [GACATTGTTGCTAGTTGGTGATGGCTGAGCAGGCTAATCAACCGACTGTCCTTCAGAAGTCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAGCGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAGCCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGACCCAGATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGAAGCTCTCCCACTTCCCCTCGCCGCCGGCGCTCGACTCGCCGTTCTGGCTGTGGTTGGTGACGTGGCACCTTGGGCTGTTCCTGGCGCTCACCTTCGGCCAGATCGGGTTCAAGGGCAGGACCGAGGGCTACTTCGACAAGTGAATGAATCCNCAGTGGCTTTTGGTTAGCTTGACTGTACGGACGGATGTGTGCGCTGCATATCCTTCCTTTTGTATAGGGCTCTGATTTGATCCTCTTGCGGATGTACGCTGTTGTAATTCTCCTCAACTCCTTAAAACTTTAAAGGACAAATATATGTGTTGTGGCTAAAAAAAAAAAAAAA]

[+] EMBL CA754507             [GACATTGTTGCTAGTTGGTGATGGCTGAGCAGGCTAATCAACCGACTGTCCTTCAGAAGTCACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAGCGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAGCCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGACCCAGATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATA                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU198109             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTGAGGATGGTGAATCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAATAAGGTTTGCCCGATGTGCAGCGAAGCTCTCCCACTTCCCCTCGCCGCCGGCGCTCGACTCGCCGTTCTGGCTGTGGTTGGTGACGTGGCACCTTGGGCTGTTCCTGGCGCTCACCTTCGGCCAGATCGGGTTCAAGGGCAGGACCGAGGGCTACTTCGACAAGTGAATGAATCCNCAGTGGCTTTTGGTTAGCTTGACTGTACGGACGGATGTGTGCGCTGCATATCCTTCCTTTTGTATAGGGCTCTGATTTGATCCTCTTGCGGATGTACGCTGTTGTAATTCTCCTCAACTCCTTAAAACTTTAAAGGACAAATATATGTGTTGTGGCTAAAAAAAAAAAAAAA]


>consensus_12897#1 GACATTGTTGCTAGTTGGTGATGGCTGAGCAGGCTAATCAACCGACTGTCCTTCAGAAGT CACCACGAGCACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCT GAGGGAAGCGAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAG CCAGAGCTAGACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGAT GCCGAGGAGCGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGA CCTGTGGAGCCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGAC CCAGATGAGTATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACAC AGAGGCCTCTCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGT GTCCAAGATGGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAA TCTTTGATTGCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTT CAAATAAATAAGGTTTGCCCGATGTGCAGCGAAGCTCTCCCACTTCCCCTCGCCGCCGGC GCTCGACTCGCCGTTCTGGCTGTGGTTGGTGACGTGGCACCTTGGGCTGTTCCTGGCGCT CACCTTCGGCCAGATCGGGTTCAAGGGCAGGACCGAGGGCTACTTCGACAAGTGAATGAA TCCNCAGTGGCTTTTGGTTAGCTTGACTGTACGGACGGATGTGTGCGCTGCATATCCTTC CTTTTGTATAGGGCTCTGATTTGATCCTCTTGCGGATGTACGCTGTTGTAATTCTCCTCA ACTCCTTAAAACTTTAAAGGACAAATATATGTGTTGTGGCTAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12897#0      ATCCTCGCCCCCTCTTTCTCTCTAATCTCCGCCAAGGCGATGGCGGATTCGAAGGGGAGC 60
consensus_12897#1      ------------------------------------------------------------
                                                                                   

consensus_12897#0      GGCGGCGCCGCCGGCGACAAGCCCGGCGCCGACGCGAGCCCCGCCACGAATCCGGCCCCG 120
consensus_12897#1      ------------------------------------------------------------
                                                                                   

consensus_12897#0      CCAGCTGCCGCCGTGGCCGTCGCCGCTGCGGCCGCGGACGCCGGAGGGGACGACGACGTG 180
consensus_12897#1      ------------------------------------------------------------
                                                                                   

consensus_12897#0      GCCGCGGCCGCGGAGGCGCGGCGGCCGTTCACGGCGCTCAGCCAGGTCGACGCCGACCTC 240
consensus_12897#1      ------------------------------------------------------------
                                                                                   

consensus_12897#0      GCCCTGGCCCGCGTGCTCCAGGAGCAGGAGCGGGCGTACATGATGCTTCGCATGGGCGGA 300
consensus_12897#1      ------------------------------------------------------------
                                                                                   

consensus_12897#0      GGCGTCGGCGAGGGCAGCGATTACGGGAGCTCGGATGCCGGGAGCTACGAGTACGACGAC 360
consensus_12897#1      -------------------------------------------------GACATTGTTGC 11
                                                                           *      *

consensus_12897#0      GAGGCCGAGGAGGACTACGAGGAGGAGCTGGAGCACCACCTCCGCGTCCACCACCACGAG 420
consensus_12897#1      TAG-TTGGTGATGGCTGAGCAGGCTAATCAACCGACTGTC-CTTCAGAAGTCACCACGAG 69
                        **   *  ** * **  *  *   *        **   * *  *      *********

consensus_12897#0      CACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGC 480
consensus_12897#1      CACGCCGTTGGGGAGGGTCGTGGCGAGGGAGAGCGAGATGGGGAGGGGGCTGAGGGAAGC 129
                       ************************************************************

consensus_12897#0      GAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTA 540
consensus_12897#1      GAGTTCGAGGAGGAGGGGTTCGACGAGGAGTATGATGAGGAGGAAGTCGAGCCAGAGCTA 189
                       ************************************************************

consensus_12897#0      GACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAG 600
consensus_12897#1      GACCCCGCGGAGTACGAGGACGATGAGGCTTATGCACGAGCTCTGCAGGATGCCGAGGAG 249
                       ************************************************************

consensus_12897#0      CGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAG 660
consensus_12897#1      CGCGAAGTAGCCGCGCGACTTATGGCTCTCGCGGGGATCAGCGATTGGAGACCTGTGGAG 309
                       ************************************************************

consensus_12897#0      CCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGACCCAGATGAG 720
consensus_12897#1      CCTGTAGAGGAGCATGCGAATGATCCACAGGATGCGTGGCAAGAGGTTGACCCAGATGAG 369
                       ************************************************************

consensus_12897#0      TATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTC 780
consensus_12897#1      TATTCTTATGAGGAATTAGTTGCATTGGGAGAAGCGGTTGGTACAGGACACAGAGGCCTC 429
                       ************************************************************

consensus_12897#0      TCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGAT 840
consensus_12897#1      TCTGCTGCTACACTTGCTTCTCTACCTTCAGTAACTTACAAGGCAGAAGGTGTCCAAGAT 489
                       ************************************************************

consensus_12897#0      GGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATT 900
consensus_12897#1      GGCAACACAGAGCAATGTGTTATTTGTCGTGTGGAATTTGAGGATGGTGAATCTTTGATT 549
                       ************************************************************

consensus_12897#0      GCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAAT 960
consensus_12897#1      GCACTCCCCTGCAAGCATTCATACCATCCTGAGTGCATAAACCAATGGCTTCAAATAAAT 609
                       ************************************************************

consensus_12897#0      AAGGTTTGCCCGATGTGCAGCGCGGAAGTTTCCACATCGGACAGCAACCAG-GCATGACC 1019
consensus_12897#1      AAGGTTTGCCCGATGTGCAGCGAAGCT-CTCCCACTTCCCCTCGCCGCCGGCGCTCGACT 668
                       **********************  *    * **** **     **  ** * **  *** 

consensus_12897#0      AATCTTTGCTGCCATTATGGGGCTTGATGGGAGCAAATAGCGGGCATCATATGGTCGCAT 1079
consensus_12897#1      CGCCGTTCTGGCTGTGGTTGG---TGACGTGGCACCTTGGGCTGTTCCTGGCGCTCACCT 725
                          * **   **  *  * **   *** * *      * *   *   *    * ** * *

consensus_12897#0      CTTGTAATGTTGGGGAGAAGG-CAGA--TAAAACTTTCGGACACATGCGAGGGACCAGCA 1136
consensus_12897#1      TCGGCCAGATCGGGTTCAAGGGCAGGACCGAGGGCTACTTCGACAAGTGAATGAATC-CN 784
                          *  *  * ***   **** ***     *    * *    *** * **  **    * 

consensus_12897#0      CTATGATCTTTTGCGTTCTTCAGTCCTCTCCTGGCTTAGCTCCACTGTA---CTCTGTTT 1193
consensus_12897#1      CAGTGGCTTTTGGTTAGCTTGACTGTACGGACGGATGTG-TGCGCTGCATATCCTTCCTT 843
                       *  **   *** *    *** * *   *    ** *  * * * *** *   *  *  **

consensus_12897#0      GCCCGTGCCGCTATGCTCTGCATTCCCTGTGGGGGCCTCATGGCTGTTGTATGATCCATA 1253
consensus_12897#1      TTGTATAGGGCTCTGATTTGATCCTCTTGCGGATGTAC----GCTGTTGTAATTCTCCTC 899
                            *   *** ** * **     * ** **  *       *********     * * 

consensus_12897#0      AATGTACAATGGTTATATTATTATATTATATATTGCTAGCCATTCTTTTTACTAAAAAAA 1313
consensus_12897#1      AAC------TCCTTAAAACTTTAAAGGACAAAT--ATATGTGTTGTGGCTAAAAAAAAAA 951
                       **       *  *** *   *** *  * * **   **    ** *   **  *******

consensus_12897#0      AAAA- 1317
consensus_12897#1      AAAAA 956
                       **** 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)