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Oryza sativa
cluster # 12898 cluster # 12898       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12898#0 length = 2267 sequences # 3  
consensus_12898#1 length = 1633 sequences # 6  
consensus_12898#2 length = 811 sequences # 1  
consensus_12898#3 length = 581 sequences # 1  

consensusID : consensus_12898#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2267
fasta sequence
                              [AGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGGGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGTAAGCGTAACGGTGTCTATGTCTGTGAACGTGCTTTTTTAATACCCTATACTCTTATTTTTATCGCTCCATTTTACTCCTATTTGTGTACTGTTGAATGTGTGTCATGGTCGGTACACATGTAGTTGAAGTGCTAAGGATGGCGCACAGGGGGCAGAACCAAGCGGCAGCAGATAGACCATCAATGCATTTGCCGCACCTATCGTACCTCCTTAGTTGTTTGATTCAATTTGTTTAGGTTGAGATTTGTTAAACTTTTTAGGTTTGTTAGGGGCTGGCTTTATTTAAGGGAGCTTGGCATTATCTTTGAAATTAAGAGCAAATTACAAGTCTACTCTCTCATCCCCTGTTCTCTCTGCCTCTCCCCTTTTTTGGTGCTGCCTGGTGCCATCTCATTCAACCATGGGTAGTAAGACTGTTAACCTATCTAGCTACTTCCCACTCCTATCTTATTAGATCACTCCCTAACGCCCGAATATATTATATTGTTCTTGGCCTCATGGGTGGCTGATGACGATCAATGAAAACTTCAGACATGTCTGTGAGTGATGCTTTTTTTCCCCTTGCAAACGATAGAATTATGAATTAGTATCTGTTTTCGTTTTGGATGCTGTAAATTTAAAATGTCTGGACCTTTATAGTATGTCCCGTGTATCCTTTCACATTCTTCTGAAATATTTATTTTTGCTATTTAATATGCAATCCATGACACAATTTGTTTTGTTGCTCAAGAATGGCCATCACATGATCTCATTTGCTGAAGTTCAAAATGGCACTGCTTGGCTGCGATTTTTTGCGGCTGCAGCTGTGCTTAATGTCTGTGGCTGTGGTGCACAGCCGTGGCTACTAGCAGCAGACGCAGCCACAAAAATGACAGCCAAACAAGCCCAATATATCTCTTTCAGATTTAGTTAATACTTGGTTGCTCTTTGTTCCATATATTCTGATGTTAGTGTAACTTTTATCCACATTCATGATCTACCACACTTGCCAGTGTTAGTAGTAATTGGGATTTACTTGCCAAAAGAATAATTCTCAGACTCCAGCAGATAAGTGAGGTTAACTCTGTCTTTATGGTATAGTTTTCTTAACAAATCAGCAATCTCAGTACCCTTGCTAGACGATTTTAATGAGTGTTAATAGTTTGGTTGTTTGTGCTTTGCTGGTATTGTTGCTAGATTTCAACTGAAACAATCTTGTATGGTGCCCGCATCACATTTTTATGGTTGAAACATGAGTGTGCAACTGTGCATGCGATGTCTCCATGTTGTCTTTTGAACTGAAATATTTCTCCATTTTTATTTGCAGGGTTACGATTCCAACCATATGAATGGCTACTTCTGGCCGTTTGGAGATCATTCAGCATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATGAAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTT]

[+] EMBL AK103680             [AGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGGGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGTAAGCGTAACGGTGTCTATGTCTGTGAACGTGCTTTTTTAATACCCTATACTCTTATTTTTATCGCTCCATTTTACTCCTATTTGTGTACTGTTGAATGTGTGTCATGGTCGGTACACATGTAGTTGAAGTGCTAAGGATGGCGCACAGGGGGCAGAACCAAGCGGCAGCAGATAGACCATCAATGCATTTGCCGCACCTATCGTACCTCCTTAGTTGTTTGATTCAATTTGTTTAGGTTGAGATTTGTTAAACTTTTTAGGTTTGTTAGGGGCTGGCTTTATTTAAGGGAGCTTGGCATTATCTTTGAAATTAAGAGCAAATTACAAGTCTACTCTCTCATCCCCTGTTCTCTCTGCCTCTCCCCTTTTTTGGTGCTGCCTGGTGCCATCTCATTCAACCATGGGTAGTAAGACTGTTAACCTATCTAGCTACTTCCCACTCCTATCTTATTAGATCACTCCCTAACGCCCGAATATATTATATTGTTCTTGGCCTCATGGGTGGCTGATGACGATCAATGAAAACTTCAGACATGTCTGTGAGTGATGCTTTTTTTCCCCTTGCAAACGATAGAATTATGAATTAGTATCTGTTTTCGTTTTGGATGCTGTAAATTTAAAATGTCTGGACCTTTATAGTATGTCCCGTGTATCCTTTCACATTCTTCTGAAATATTTATTTTTGCTATTTAATATGCAATCCATGACACAATTTGTTTTGTTGCTCAAGAATGGCCATCACATGATCTCATTTGCTGAAGTTCAAAATGGCACTGCTTGGCTGCGATTTTTTGCGGCTGCAGCTGTGCTTAATGTCTGTGGCTGTGGTGCACAGCCGTGGCTACTAGCAGCAGACGCAGCCACAAAAATGACAGCCAAACAAGCCCAATATATCTCTTTCAGATTTAGTTAATACTTGGTTGCTCTTTGTTCCATATATTCTGATGTTAGTGTAACTTTTATCCACATTCATGATCTACCACACTTGCCAGTGTTAGTAGTAATTGGGATTTACTTGCCAAAAGAATAATTCTCAGACTCCAGCAGATAAGTGAGGTTAACTCTGTCTTTATGGTATAGTTTTCTTAACAAATCAGCAATCTCAGTACCCTTGCTAGACGATTTTAATGAGTGTTAATAGTTTGGTTGTTTGTGCTTTGCTGGTATTGTTGCTAGATTTCAACTGAAACAATCTTGTATGGTGCCCGCATCACATTTTTATGGTTGAAACATGAGTGTGCAACTGTGCATGCGATGTCTCCATGTTGTCTTTTGAACTGAAATATTTCTCCATTTTTATTTGCAGGGTTACGATTCCAACCATATGAATGGCTACTTCTGGCCGTTTGGAGATCATTCAGCATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATGAAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCT                                              ]
[+] EMBL CB670426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGTAAGCGTAACGGTGTCTATGTCTGTGAACGTGCTTTTTTAATACCCTATACTCTTATTTTTATCGCTCCATTTTACTCCTATTTGTGTACTGTTGAATGTGTGTCATGGTCGGTACACATGTAGTTGAAGTGCTAAGGATGGCGCACAGGGGGCAGAACCAAGCGGCAGCAGATAGACCATCAATGCATTTGCCGCACCTATCGTACCTCCTTAGTTGTTTGATTCAATTTGTTTAGGTTGAGATTTGTTAAACTTTTTAGGTTTGTTAGGGGCTGGCTTTATTTAAGAGAGCTTGGCATTATCTTTGAAATTAAGAGCAAATTACAAGTCTACTCTCTCATCCCCTGTTCTCTCTGCCTCTCCCCTTTTTTGGTGCTGCCTGGTGCCATCTCATTCAACCATGGGTAGTAAGACTGTTAACCTATCTAGCTACTTCCCACTCCTATCTTATTAGATCACTCCCTAACGCCCGAATATATTATATTGTTCTTGGCCTCATGGGTGGCTGATGACGATCAATGAAAACTTCAGACATGTCTGTGAGTGATGCTTTTTTTCCCCTTGCAAACGATAGAATTATGAATTAGTATCTGTTTTCGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB670427             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GATCTCATTTGCTGAAGTCAAAAATGGCACTGCTTGGCTGCGATTTTTTGCGGCTGCAGCTGTGCATAATGTCTGTGGCTGTGGCGCACAGCCGTGGCTACTAGCAGCAGACGCAGCCACAAAAATGACAGCCAAACAAGCCCAATATATCTCTTTCAGATTTAGTTAATACTTGGTTGCTCTTTGTTCCATATATTCTGATGTTAGTGTAACTTTTATCCACATTCATGATCTACCACACTTGCCAGTGTTAGTAGTAATTGGGATTTACTTGCCAAAAGAATAATTCTCAGACTCCAGCAGATAAGTGAGGTTAACTCTGTCTTTATGGTATAGTTTTCTTAACAAATCAGCAATCTCAGTACCCTTGCTAGACGATTTTAATGAGTGTTAATAGTTTGGTTGTTTGTGCTTTGCTGGTATTGTTGCTAGATTTCAACTGAAACAATCTTGTATGGTGCCCGCATCACATTTTTATGGTTGAAACATGAGTGTGCAACTGTGCATGCGATGTCTCCATGTTGTCTTTTGAACTGAAATATTTCTCCATTTTTATTTGCAGGGTTACGATTCCAACCATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGCATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATGAAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTT]


>consensus_12898#0 AGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACAT ATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTC TTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACA AAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTT CAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTG TTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACAT ACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGC TGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATGC ATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTT TAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAAC AAACACAAATTTATGGGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGT GCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGTAAGCGTAACGGTGTCTATGT CTGTGAACGTGCTTTTTTAATACCCTATACTCTTATTTTTATCGCTCCATTTTACTCCTA TTTGTGTACTGTTGAATGTGTGTCATGGTCGGTACACATGTAGTTGAAGTGCTAAGGATG GCGCACAGGGGGCAGAACCAAGCGGCAGCAGATAGACCATCAATGCATTTGCCGCACCTA TCGTACCTCCTTAGTTGTTTGATTCAATTTGTTTAGGTTGAGATTTGTTAAACTTTTTAG GTTTGTTAGGGGCTGGCTTTATTTAAGGGAGCTTGGCATTATCTTTGAAATTAAGAGCAA ATTACAAGTCTACTCTCTCATCCCCTGTTCTCTCTGCCTCTCCCCTTTTTTGGTGCTGCC TGGTGCCATCTCATTCAACCATGGGTAGTAAGACTGTTAACCTATCTAGCTACTTCCCAC TCCTATCTTATTAGATCACTCCCTAACGCCCGAATATATTATATTGTTCTTGGCCTCATG GGTGGCTGATGACGATCAATGAAAACTTCAGACATGTCTGTGAGTGATGCTTTTTTTCCC CTTGCAAACGATAGAATTATGAATTAGTATCTGTTTTCGTTTTGGATGCTGTAAATTTAA AATGTCTGGACCTTTATAGTATGTCCCGTGTATCCTTTCACATTCTTCTGAAATATTTAT TTTTGCTATTTAATATGCAATCCATGACACAATTTGTTTTGTTGCTCAAGAATGGCCATC ACATGATCTCATTTGCTGAAGTTCAAAATGGCACTGCTTGGCTGCGATTTTTTGCGGCTG CAGCTGTGCTTAATGTCTGTGGCTGTGGTGCACAGCCGTGGCTACTAGCAGCAGACGCAG CCACAAAAATGACAGCCAAACAAGCCCAATATATCTCTTTCAGATTTAGTTAATACTTGG TTGCTCTTTGTTCCATATATTCTGATGTTAGTGTAACTTTTATCCACATTCATGATCTAC CACACTTGCCAGTGTTAGTAGTAATTGGGATTTACTTGCCAAAAGAATAATTCTCAGACT CCAGCAGATAAGTGAGGTTAACTCTGTCTTTATGGTATAGTTTTCTTAACAAATCAGCAA TCTCAGTACCCTTGCTAGACGATTTTAATGAGTGTTAATAGTTTGGTTGTTTGTGCTTTG CTGGTATTGTTGCTAGATTTCAACTGAAACAATCTTGTATGGTGCCCGCATCACATTTTT ATGGTTGAAACATGAGTGTGCAACTGTGCATGCGATGTCTCCATGTTGTCTTTTGAACTG AAATATTTCTCCATTTTTATTTGCAGGGTTACGATTCCAACCATATGAATGGCTACTTCT GGCCGTTTGGAGATCATTCAGCATAATACCACATAGTCTATATTGTTGTAATTTCACTCT TATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATGAAAAAAATAT ATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGC TGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTT



consensusID : consensus_12898#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1633
fasta sequence
                              [TCCGTTCCCTAACCACCATTCCTCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGACGACGACGACGAGTACGACGACTACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCGGCCACGCCGATGGCTACGGGGAGCGCCGTATTGGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAGGGAGGCGTCGAGGAAGCCGTCGTCATACAAGTGGAGCCGCCGGCCACCGGGACTGTAGAGTGGCACCACGCCGCCGACGACCCGGAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACC--ATTTGA-A-CCAATTAAGCCTTCTTGGG-CTATG-CA-TTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTC-AACAA-ACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCA-GTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCAACCATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGC-ATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATG-AAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTTTTTAAAAAAAAGA]

[+] EMBL AK065098             [TCCGTTCCCTAACCACCATTCCTCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGACGACGACGACGAGTACGACGACTACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCGGCCACGCCGATGGCTACGGGGAGCGCCGTATTGGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAGGGAGGCGTCGAGGAAGCCGTCGTCATACAAGTGGAGCCGCCGGCCACCGGGACTGTAGAGTGGCACCACGCCGCCGACGACCCGGAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACC  ATTTGA A CCAATTAAGCCTTCTTGGG CTATG CA TTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTC AACAA ACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCA GTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCAACCATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGC ATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATG AAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTG                                                          ]
[+] EMBL CB658376             [                                                                                                        CGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCGGCCACGCCGATGGCTACGGGGAGCGCCGTATTGGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAGGGAGGCGTCGAGGAAGCCGTCGTCATACAAGTGGAGCCGCCGGCCACCGGGACTGTAGAGTGGCACCACGCCGCCGACGACCCGGAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGATCGTATGATCGCTCTTATGATCAGGCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF196550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCCGGCCACCGGGACTGTAGAGTGGCACCACGCCGCCGACGACCCGGAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACC  ATTTGA A CCAATTAAGCCTTCTTGGG CTATG CA TTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAAnnnn                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA767351             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATGCAGCTGCCTGATGAACATGTGCCAGATGAACC  ATTTGA A CCAATTAAGCCTTCTTGGG CTATG CA TTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTC AACAA ACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCA GTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCAACAATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGC ATAATACCACATAGTCTATATTGGTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATGAAAAAAAATATATATAAGAGGGTATGCACCAATGTATCTAGGNTCAGCATATAATGTAAGATCATTGACGCTGNTGGTGACCATAATTACTTCTTTTTATAGGGATATCC                     ]
[-] EMBL CB658377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACC  ATTTGA A CCAATTAAGCCTTCTTGGG CTATG CA TTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTC AACAA ACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCA GTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCAACCATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGC ATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAAATG AAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTTTTTAAAAAAAAGA]
[+] EMBL BI801486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtcGCCAGATGAACCCGTTTTGAGACCCGTTTAAGCCTTCTTGGGCCTATGCCATTTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCGAACAACAC CGAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCACGTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCA  CATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGCGATAATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCC AATGTAAATG AAAAAAATATATATAAGAGGTTATGCACC ATGTATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGAaaaaaaa                   ]


>consensus_12898#1 TCCGTTCCCTAACCACCATTCCTCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGAC GACGACGACGAGTACGACGACTACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTC GCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCT GCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCT GCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGG CCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGG GATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTC TTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATG CGGGGGCTGGATTACCTCTTCGGCCACGCCGATGGCTACGGGGAGCGCCGTATTGGGGTG GACTACCACGGCGTCCCCGTCTACGCCAACAGGAAGGGAGGCGTCGAGGAAGCCGTCGTC ATACAAGTGGAGCCGCCGGCCACCGGGACTGTAGAGTGGCACCACGCCGCCGACGACCCG GAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCCAAAGATGAAACA TATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCTTACAGT CTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTAC AAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATT TCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTT GTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGAGCTTCTCAACA TACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAG CTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATG CATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACT TTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAA CAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAG TGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGATTCCAACCATATG AATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGCATAATACCACATAGTCTATATTGTT GTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCCGGCCAAATGTAA ATGAAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCAGCATATAATGTA AGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGATATCCAGTTTCTT TTTAAAAAAAAGA



consensusID : consensus_12898#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 811
fasta sequence
                              [AGCCTTTGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGGATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGGTTTGTCTGTCATCTACAAATGCTGTTTACAGTGTCTTCATTTGGTAATTATGCATTTGCTTGTTCGGGTTGAGTTCATCAATCTCAAGGGAGAACACTTTTTTTTTATGTAATCTTGTGATTGTCAATTAAATAATTTGTGCAAAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGGGGTTTCTGAA]

[+] EMBL CB685635             [AGCCTTTGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGGATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAGGTTTGTCTGTCATCTACAAATGCTGTTTACAGTGTCTTCATTTGGTAATTATGCATTTGCTTGTTCGGGTTGAGTTCATCAATCTCAAGGGAGAACACTTTTTTTTTATGTAATCTTGTGATTGTCAATTAAATAATTTGTGCAAAGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTGGGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGGGGTTTCTGAA]


>consensus_12898#2 AGCCTTTGCTTATCTTGGGATGACAATGCCAAAGATGAAACATATGCATATGTGCAGCAC AATTACAGTTCGGATGATCGCTCTTATGATCAGTCTTACAGTCTTGATGCCGTTTCCGAT GAAACTACTTGGTTTCCTAATCAGAACTACCAGCACGTGTACAAAGAGGAGGAATCTCAG TATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGTAAGATTTCAGCTCAGCCTATTTAT TGTTACAACCAGCAGTTTAGTGAACAACCGCTACATGTTCTTGTTGAGCCCCCAGAAACA GTTTATTCTCAGAAGTTGGAGTACTATGAGGTTTGTCTGTCATCTACAAATGCTGTTTAC AGTGTCTTCATTTGGTAATTATGCATTTGCTTGTTCGGGTTGAGTTCATCAATCTCAAGG GAGAACACTTTTTTTTTATGTAATCTTGTGATTGTCAATTAAATAATTTGTGCAAAGCTT CTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCATATGA CATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCTTCTTG GGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTCGAAAA TCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCCTTCTA CCCTCAACAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAGCAAAA TTGGCAGTGCAACTGGAATGGGGTTTCTGAA



consensusID : consensus_12898#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 581
fasta sequence
                              [TCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGACGACGACGACGAGTACGACGACTACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCGGCCCGCCGATGGCTACGGGGGAGCGCCGTATTGGGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAAGGAGGCGTCNAGGAAGCCGTCGTCAT]

[+] EMBL CB639793             [TCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGACGACGACGACGAGTACGACGACTACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGCGGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGGCGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCGGCCCGCCGATGGCTACGGGGGAGCGCCGTATTGGGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAAGGAGGCGTCNAGGAAGCCGTCGTCAT]


>consensus_12898#3 TCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGACGACGACGACGAGTACGACGACT ACAACCCCCACCCCTACGGCGGCGGCTACGACATCTTCGCCACCTACGGCTCCCCGATTC CGCCCTCCCCCACCACCTGCTACCCCGTCTCCTCCGCTGCTCCTACGGCCCCGCCGCCTA AGCCGTCGCCTACTCCGCCTCCGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACGC GGCCGCCTTCTCCGCCGCCGCAGCAGCAGCAGCCTCGGCCGGTTTCGCCGCCGCCCGTGG CGGAGCCGTACTACTGGCCCAAGCCCTACGACTACGGGGATGCGCCGCGCGAGCAGCCGG CGTACGCCACGCCGGAGGTCTTCCGGGGCTGGCCCTTCTTCGCGGGGGCGCGCTGCCACT CGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTTCATGCGGGGGCTGGATTACCTCTTCG GCCCGCCGATGGCTACGGGGGAGCGCCGTATTGGGGGTGGACTACCACGGCGTCCCCGTC TACGCCAACAGGAAAGGAGGCGTCNAGGAAGCCGTCGTCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12898#1      TCCGTTCCCTAACCACCATTCCTCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGAC 60
consensus_12898#3      ----------------------TCGCCATGGCGGCCCCGGCGGACGACTACTACGGCGAC 38
consensus_12898#0      ------AGTACAACTACAACAACGGCAATCGCTTATCTTG-GGATGACAATGCCAAAGAT 53
consensus_12898#2      -----------------------AGCCTTTGCTTATCTTG-GGATGACAATGCCAAAGAT 36
                                               **  * **    *  * *** *** *   *   ** 

consensus_12898#1      GACGACGACGAGTACG------ACGACTACAACCC------CCACCCCTACGGCGGCGGC 108
consensus_12898#3      GACGACGACGAGTACG------ACGACTACAACCC------CCACCCCTACGGCGGCGGC 86
consensus_12898#0      GAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGATCAGTCT 113
consensus_12898#2      GAAACATATGCATATGTGCAGCACAATTACAGTTCGGATGATCGCTCTTATGATCAGTCT 96
                       **     * *  ** *      ** * ****   *       * * * ** *        

consensus_12898#1      TACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCC 168
consensus_12898#3      TACGACATCTTCGCCACCTACGGCTCCCCGATTCCGCCCTCCCCCACCACCTGCTACCCC 146
consensus_12898#0      TACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCAC 173
consensus_12898#2      TACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTACCAGCAC 156
                       ***    *    ***   * **      * * *  *    *       * ** * * * *

consensus_12898#1      GTCTCCTCCGCTGC----TCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCG----- 219
consensus_12898#3      GTCTCCTCCGCTGC----TCCTACGGCCCCGCCGCCTAAGCCGTCGCCTACTCCG----- 197
consensus_12898#0      GTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGT 233
consensus_12898#2      GTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCAGAAAGT 216
                       ** * *   *  *     **  *    *  *    **   **  * * *   * *     

consensus_12898#1      ----CCTC----CGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACG-CGGCCGCCT 270
consensus_12898#3      ----CCTC----CGGCTTCTCCACCGCCTGCGCCCACTCCCCCGCAAACG-CGGCCGCCT 248
consensus_12898#0      AAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACAT 293
consensus_12898#2      AAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCGCTACAT 276
                             **    * ** * *  *  *      **  *      *  ***  * **  * *

consensus_12898#1      TCTCC-GCCG---CCGCAGCAGCAGC--AGCCTCGGCCGGTTTCGCCGCCGCCCGT---- 320
consensus_12898#3      TCTCC-GCCG---CCGCAGCAGCAGC--AGCCTCGGCCGGTTTCGCCGCCGCCCGT---- 298
consensus_12898#0      GTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGA-AGTTGGAGTACTATGAG----- 347
consensus_12898#2      GTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGA-AGTTGGAGTACTATGAGGTTTG 335
                         **  *  *   ** *** * ***   *  *** *   ***      *     *     

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ------------------------------------------------------------
consensus_12898#2      TCTGTCATCTACAAATGCTGTTTACAGTGTCTTCATTTGGTAATTATGCATTTGCTTGTT 395
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ------------------------------------------------------------
consensus_12898#2      CGGGTTGAGTTCATCAATCTCAAGGGAGAACACTTTTTTTTTATGTAATCTTGTGATTGT 455
                                                                                   

consensus_12898#1      --------------------GGCGGAGC--CGTACTACTGGCCCAAGCCCTACGACTACG 358
consensus_12898#3      --------------------GGCGGAGC--CGTACTACTGGCCCAAGCCCTACGACTACG 336
consensus_12898#0      --------------------AGCTTCTCAACATACAACCACCATAACAGCAACGATGATT 387
consensus_12898#2      CAATTAAATAATTTGTGCAAAGCTTCTCAACATACAACCACCATAACAGCAACGATGATT 515
                                            **    *  * *** **   *  **   * ****  *  

consensus_12898#1      GGGATGCGCCGCG-CGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGG-GGCTGGCC 416
consensus_12898#3      GGGATGCGCCGCG-CGAGCAGCCGGCGTACGCCACGCCGGAGGTCTTCCGG-GGCTGGCC 394
consensus_12898#0      CAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAAC 447
consensus_12898#2      CAGATATGTTGGGACATTCATATGACATACAGCTGCCCGATGAACATGTGCCAGATGAAC 575
                         ***  *  * * *   **   * * ***  *   ***  *  * *  *   * **  *

consensus_12898#1      CTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTT 476
consensus_12898#3      CTTCTTCGCGGGGGCGCGCTGCCACTCGCGGTGCGGCGGCCGCGACTACTGGAGGCAGTT 454
consensus_12898#0      CATTTGAACCAAT-TAAGCCTTCTTGGGCTATGCATTCGGGAT-ACTATCAGTC-CTGCA 504
consensus_12898#2      CATTTGAACCAAT-TAAGCCTTCTTGGGCTATGCATTCGGGAT-ACTATCAGTC-CTGCA 632
                       * * *   *        **   *    **  ***    *     ****   *   * *  

consensus_12898#1      CATGCGGGG-GCTGGATTACCTCTTCGGCCACGCCGATGGCTACGGGG-AGC--GCCGTA 532
consensus_12898#3      CATGCGGGG-GCTGGATTACCTCTTCGGCC-CGCCGATGGCTACGGGGGAGC--GCCGTA 510
consensus_12898#0      CAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTA 564
consensus_12898#2      CAGATGGGGCATCTGCTGAATTCGAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTA 692
                       **   ****     * * *  **      *   *     *** * * * *    *  ***

consensus_12898#1      TTG-GGG-TGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAGGGA--GGCGTCGAG 588
consensus_12898#3      TTG-GGGGTGGACTACCACGGCGTCCCCGTCTACGCCAACAGGAAAGGA--GGCGTCNAG 567
consensus_12898#0      TTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGGGTGTCATG 624
consensus_12898#2      TTGCAAGCTTATTTGCAACTTCCTTCTACCCTCAACAAACACAAATTTATGAGTGTCATG 752
                       ***   * *    * * **  * * *    **   * ****  **   *   * ***  *

consensus_12898#1      GAAGCCGTCGTCATACAAGTGGAGCCGCCGGCCACCGGGACTGTAGAGTGGCACCACGCC 648
consensus_12898#3      GAAGCCGTCGTCAT---------------------------------------------- 581
consensus_12898#0      GAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGTGGTTTCTGAAA 684
consensus_12898#2      GAGATGAGAATGTTTCCTTGCAGCAAAATTGGCAGTGCAACTGGAATGGGGTTTCTGAA- 811
                       **        *  *                                              

consensus_12898#1      GCCGACGACCCGGAGTACAACTACAACAACGGCAATCGCTTATCTTGGGATGACAATGCC 708
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ATGATTTCCAATCGGTAAGCGTAACGGTGTCTATGTCTGTGAACGTGCTTTTTTAATACC 744
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      AAAGATGAAACATATGCATATGTGCAGCACAATTACAGTTCGTATGATCGCTCTTATGAT 768
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      CTATACTCTTATTTTTATCGCTCCATTTTACTCCTATTTGTGTACTGTTGAATGTGTGTC 804
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      CAGTCTTACAGTCTTGATGCCGTTTCCGATGAAACTACTTGGTTTCCTAATCAGAACTAC 828
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ATGGTCGGTACACATGTAGTTGAAGTGCTAAGGATGGCGCACAGGGGGCAGAACCAAGCG 864
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      CAGCACGTGTACAAAGAGGAGGAATCTCAGTATCAGGAAATCTTGTCCAGCTCTTGTGCA 888
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      GCAGCAGATAGACCATCAATGCATTTGCCGCACCTATCGTACCTCCTTAGTTGTTTGATT 924
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      GAAAGTAAGATTTCAGCTCAGCCTATTTATTGTTACAACCAGCAGTTTAGTGAACAACCG 948
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      CAATTTGTTTAGGTTGAGATTTGTTAAACTTTTTAGGTTTGTTAGGGGCTGGCTTTATTT 984
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      CTACATGTTCTTGTTGAGCCCCCAGAAACAGTTTATTCTCAGAAGTTGGAGTACTATGAG 1008
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      AAGGGAGCTTGGCATTATCTTTGAAATTAAGAGCAAATTACAAGTCTACTCTCTCATCCC 1044
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      AGCTTCTCAACATACAACCACCATAACAGCAACGATGATTCAGATATGTTGGGACATTCA 1068
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      CTGTTCTCTCTGCCTCTCCCCTTTTTTGGTGCTGCCTGGTGCCATCTCATTCAACCATGG 1104
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      TATGACATACAGCTGCCCGATGAACATGTGCCAGATGAACCATTTGAACCAATTAAGCCT 1128
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      GTAGTAAGACTGTTAACCTATCTAGCTACTTCCCACTCCTATCTTATTAGATCACTCCCT 1164
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      TCTTGGGCTATGCATTCGGGATACTATCAGTCCTGCACAGATGGGGCATCTGCTGAATTC 1188
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      AACGCCCGAATATATTATATTGTTCTTGGCCTCATGGGTGGCTGATGACGATCAATGAAA 1224
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      GAAAATCATACTTTAAGCTCCAGTGAATTCAGTGGTATTGCAAGCTTATTTGCAACTTCC 1248
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ACTTCAGACATGTCTGTGAGTGATGCTTTTTTTCCCCTTGCAAACGATAGAATTATGAAT 1284
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      TTCTACCCTCAACAAACACAAATTTATGAGTGTCATGGAGATGAGAATGTTTCCTTGCAG 1308
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TAGTATCTGTTTTCGTTTTGGATGCTGTAAATTTAAAATGTCTGGACCTTTATAGTATGT 1344
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      CAAAATTGGCAGTGCAACTGGAATGTGGTTTCTGAAAATGATTTCCAATCGGGTTACGAT 1368
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      CCCGTGTATCCTTTCACATTCTTCTGAAATATTTATTTTTGCTATTTAATATGCAATCCA 1404
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      TCCAACCATATGAATGGCTCCTTCTGGCCGTTTGGAGATCATTCAGCATAATACCACATA 1428
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TGACACAATTTGTTTTGTTGCTCAAGAATGGCCATCACATGATCTCATTTGCTGAAGTTC 1464
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      GTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATTTAAATTTACCC 1488
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      AAAATGGCACTGCTTGGCTGCGATTTTTTGCGGCTGCAGCTGTGCTTAATGTCTGTGGCT 1524
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      GGCCAAATGTAAATGAAAAAAATATATATAAGAGGTTATGCACCAATGTATCTAGGTTCA 1548
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      GTGGTGCACAGCCGTGGCTACTAGCAGCAGACGCAGCCACAAAAATGACAGCCAAACAAG 1584
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      GCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTTTTTATAGTGAT 1608
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      CCCAATATATCTCTTTCAGATTTAGTTAATACTTGGTTGCTCTTTGTTCCATATATTCTG 1644
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ATCCAGTTTCTTTTTAAAAAAAAGA----------------------------------- 1633
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ATGTTAGTGTAACTTTTATCCACATTCATGATCTACCACACTTGCCAGTGTTAGTAGTAA 1704
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TTGGGATTTACTTGCCAAAAGAATAATTCTCAGACTCCAGCAGATAAGTGAGGTTAACTC 1764
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TGTCTTTATGGTATAGTTTTCTTAACAAATCAGCAATCTCAGTACCCTTGCTAGACGATT 1824
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TTAATGAGTGTTAATAGTTTGGTTGTTTGTGCTTTGCTGGTATTGTTGCTAGATTTCAAC 1884
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TGAAACAATCTTGTATGGTGCCCGCATCACATTTTTATGGTTGAAACATGAGTGTGCAAC 1944
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TGTGCATGCGATGTCTCCATGTTGTCTTTTGAACTGAAATATTTCTCCATTTTTATTTGC 2004
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      AGGGTTACGATTCCAACCATATGAATGGCTACTTCTGGCCGTTTGGAGATCATTCAGCAT 2064
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      AATACCACATAGTCTATATTGTTGTAATTTCACTCTTATCTTTTTTATGTACATTTCATT 2124
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      TAAATTTACCCGGCCAAATGTAAATGAAAAAAATATATATAAGAGGTTATGCACCAATGT 2184
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      ------------------------------------------------------------
consensus_12898#3      ------------------------------------------------------------
consensus_12898#0      ATCTAGGTTCAGCATATAATGTAAGATCATTGACGCTGTTGTTGACCATAATTACTTCTT 2244
consensus_12898#2      ------------------------------------------------------------
                                                                                   

consensus_12898#1      -----------------------
consensus_12898#3      -----------------------
consensus_12898#0      TTTATAGTGATATCCAGTTTCTT 2267
consensus_12898#2      -----------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)