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Oryza sativa
cluster # 12903 cluster # 12903       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12903#0 length = 1538 sequences # 4  
consensus_12903#1 length = 1221 sequences # 7  

consensusID : consensus_12903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1538
fasta sequence
                              [CGTTGTCTCCCGTTGCATTTGCATGCGGCCATGGCGATGAAGGCGCCGGCGTCGTCCAACTCCTACCTCCTCCTCGCCCCGCTCGCGCTGCTCCTCCTCGCCGCCGTCGTCTTCCTGCTCCCTTCTCTCAACGGCGCCCGCGTCGGCTCCGATGGCGGCCTCGGCGTCCTCTGCGCCCGCCGCAGCGCTGGCGCCGAGGACTACACCGTCGCGGCGCCGGCGGCGCCGAAGGAGGAGGAGAAGCCCGAGCTGAGCCTGCTCGTCGGCGTCCTGACGATGCCGAAGCGGTACGAGCGCCGCGACATCGTGCGGCTGGCGTACGCGCTGCAGCCGGCGGCGGCGCGGGCGCGGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGCGCTGGAGGCCGCGCGCCACGGCGACGTCGTGGTGCTCGGCGGCTGCGAGGAGAACATGAACCACGGCAAGACGCACGCGTACCTCTCCTCCGTGCCGCGCCTGTTCGCGTCGTCCCCCTACGACTACGTCATGAAGACCGACGACGACACGTACCTCCGCGTGGCGGCGCTCGCCGACGAGCTCCGCGGCAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTACGCCATGGGCGGCCAGCCGATGCCGTTCATGCACGGCATGGGGTACGTCGTGTCGTGGGACGTCGCGACGTGGGTGTCCACGGCGGAGGAGATCCTCGCGCGCAACGACACGGAGGGGCCCGAGGACCTCATGGTCGGGAAGTGGCTCAACCTCGCCGGACGCGGCCGGAATCGCTACGACCTCAAGCCGCGGATGTACGACCTCAGCTGGGACATGGACAACTTCCGGCCGGACACCGTCGCCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGCTACTTCAACGTCACCGCCGGGATCAACCTGCACCACCTCTCACCATGATCGATCGATCGATCGATCACCTCTTCGATGATCCATAATTGTTGTTTGTTAATTTCTTCCCCGTTTGATTAATTCTAATTAACTAATCGTTCGACACAAAAATTAACGGGTTTAATTCGATTCGTGCATTGGTTGTGCGGTGCACGAACACGGATGCGCGAGCTGTGCCTCGGTTTGACTCGCTCAAATTCGATTTCGGCTGCTCGATTTCTTGGTGATCATCGGGTTGATCCTGTTCGATCGATTCGTCATTGATCGCCTCGTGACAACGATAGGTGTGGTTGTAATTGGCGGATTGATGAGAAACAGCACGGTGTGTCCGCGTGTGGAGGAAATGAAAGCATTCAAGATGGGGGGGTCGCCGGCTGATGGATATGATAACTCAAAGTTTGTATCCATCTTCTTCATACGATTAGGGTTGATGCAAGTGGTCCGCAGGGTGAAGCTGTAGTAGACTTGTAGCCTCCAAAGTGGAATGTGCTTGCTCTGCTTGTTATTAGCTCTGTAATTTGCTTGTACTCCTCTTGCAAAACGTAATTTGTCAAGGCTGTATATTTCAGATAGCT]

[+] EMBL AK069858             [CGTTGTCTCCCGTTGCATTTGCATGCGGCCATGGCGATGAAGGCGCCGGCGTCGTCCAACTCCTACCTCCTCCTCGCCCCGCTCGCGCTGCTCCTCCTCGCCGCCGTCGTCTTCCTGCTCCCTTCTCTCAACGGCGCCCGCGTCGGCTCCGATGGCGGCCTCGGCGTCCTCTGCGCCCGCCGCAGCGCTGGCGCCGAGGACTACACCGTCGCGGCGCCGGCGGCGCCGAAGGAGGAGGAGAAGCCCGAGCTGAGCCTGCTCGTCGGCGTCCTGACGATGCCGAAGCGGTACGAGCGCCGCGACATCGTGCGGCTGGCGTACGCGCTGCAGCCGGCGGCGGCGCGGGCGCGGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGCGCTGGAGGCCGCGCGCCACGGCGACGTCGTGGTGCTCGGCGGCTGCGAGGAGAACATGAACCACGGCAAGACGCACGCGTACCTCTCCTCCGTGCCGCGCCTGTTCGCGTCGTCCCCCTACGACTACGTCATGAAGACCGACGACGACACGTACCTCCGCGTGGCGGCGCTCGCCGACGAGCTCCGCGGCAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTACGCCATGGGCGGCCAGCCGATGCCGTTCATGCACGGCATGGGGTACGTCGTGTCGTGGGACGTCGCGACGTGGGTGTCCACGGCGGAGGAGATCCTCGCGCGCAACGACACGGAGGGGCCCGAGGACCTCATGGTCGGGAAGTGGCTCAACCTCGCCGGACGCGGCCGGAATCGCTACGACCTCAAGCCGCGGATGTACGACCTCAGCTGGGACATGGACAACTTCCGGCCGGACACCGTCGCCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGCTACTTCAACGTCACCGCCGGGATCAACCTGCACCACCTCTCACCATGATCGATCGATCGATCGATCACCTCTTCGATGATCCATAATTGTTGTTTGTTAATTTCTTCCCCGTTTGATTAATTCTAATTAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU173467             [   TGTCTCCCGTTGCATTTGCATGCGGCCATGGCGATGAAGGCGCCGGCGTCGTCCAACTCCTACCTCCTCCTCGCCCCGCTCGCGCTGCTCCTCCTCGCCGCCGTCGTCTTCCTGCTCCCTTCTCTCAACGGCGCCCGCGTCGGCTCCGATGGCGGCCTCGGCGTCCTCTGCGCCCGCCGCAGCGCTGGCGCCGAGGACTACACCGTCGCGGCGCCGGCGGCGCCGAAGGAGGAGGAGAAGCCCGAGCTGAGCCTGCTCGTCGGCGTCCTGACGATGCCGAAGCGGTACGAGCGCCGCGACATCGTGCGGCTGGCGTACGCGCTGCAGCCGGCGGCGGCGCGGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU173468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATGGGCGGCCAGCCGATGCCGTTCATGCACGGCATGGGGTACGTCGTGTCGTGGGACGTCGCGACGTGGGTGTCCACGGCGGAGGAGATCCTCGCGCGCAACGACACGGAGGGGCCCGAGGACCTCATGGTCGGGAAGTGGCTCAACCTCGCCGGACGCGGCCGGAATCGCTACGACCTCAAGCCGCGGATGTACGACCTCAGCTGGGACATGGACAACTTCCGGCCGGACACCGTCGCCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGCTACTTCAACGTCACCGCCGGGATCAACCTGCACCACCTCTCACCATGATCGATCGATCGATCGATCACCTCTTCGATGATCCATAATTGTTGTTTGTTAATTTCTTCCCCGTTTGATTAATTCTAATTAACTAATCGTTCGACACAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK063243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATTTCTTCCCCGTTTGATTAATTCTAATTAACTAATCGTTCGACACATTCTTTAACGGGTTTAATTCGATTCGTGCATTGGTTGTGCGGTGCACGAACACGGATGCGCGAGCTGTGCCTCGGTTTGACTCGCTCAAATTCGATTTCGGCTGCTCGATTTCTTGGTGATCATCGGGTTGATCCTGTTCGATCGATTCGTCATTGATCGCCTCGTGACAACGATAGGTGTGGTTGTAATTGGCGGATTGATGAGAAACAGCACGGTGTGTCCGCGTGTGGAGGAAATGAAAGCATTCAAGATGGGGGGGTCGCCGGCTGATGGATATGATAACTCAAAGTTTGTATCCATCTTCTTCATACGATTAGGGTTGATGCAAGTGGTCCGCAGGGTGAAGCTGTAGTAGACTTGTAGCCTCCAAAGTGGAATGTGCTTGCTCTGCTTGTTATTAGCTCTGTAATTTGCTTGTACTCCTCTTGCAAAACGTAATTTGTCAAGGCTGTATATTTCAGATAGCT]


>consensus_12903#0 CGTTGTCTCCCGTTGCATTTGCATGCGGCCATGGCGATGAAGGCGCCGGCGTCGTCCAAC TCCTACCTCCTCCTCGCCCCGCTCGCGCTGCTCCTCCTCGCCGCCGTCGTCTTCCTGCTC CCTTCTCTCAACGGCGCCCGCGTCGGCTCCGATGGCGGCCTCGGCGTCCTCTGCGCCCGC CGCAGCGCTGGCGCCGAGGACTACACCGTCGCGGCGCCGGCGGCGCCGAAGGAGGAGGAG AAGCCCGAGCTGAGCCTGCTCGTCGGCGTCCTGACGATGCCGAAGCGGTACGAGCGCCGC GACATCGTGCGGCTGGCGTACGCGCTGCAGCCGGCGGCGGCGCGGGCGCGGGTGGACGTC CGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGCGCTGGAGGCC GCGCGCCACGGCGACGTCGTGGTGCTCGGCGGCTGCGAGGAGAACATGAACCACGGCAAG ACGCACGCGTACCTCTCCTCCGTGCCGCGCCTGTTCGCGTCGTCCCCCTACGACTACGTC ATGAAGACCGACGACGACACGTACCTCCGCGTGGCGGCGCTCGCCGACGAGCTCCGCGGC AAGCCCCGCGACGACGTCTACCTCGGCTACGGCTACGCCATGGGCGGCCAGCCGATGCCG TTCATGCACGGCATGGGGTACGTCGTGTCGTGGGACGTCGCGACGTGGGTGTCCACGGCG GAGGAGATCCTCGCGCGCAACGACACGGAGGGGCCCGAGGACCTCATGGTCGGGAAGTGG CTCAACCTCGCCGGACGCGGCCGGAATCGCTACGACCTCAAGCCGCGGATGTACGACCTC AGCTGGGACATGGACAACTTCCGGCCGGACACCGTCGCCGTGCACATGCTCAAGGACAAC CGCCGGTGGGCGGCGGCGTTCAGCTACTTCAACGTCACCGCCGGGATCAACCTGCACCAC CTCTCACCATGATCGATCGATCGATCGATCACCTCTTCGATGATCCATAATTGTTGTTTG TTAATTTCTTCCCCGTTTGATTAATTCTAATTAACTAATCGTTCGACACAAAAATTAACG GGTTTAATTCGATTCGTGCATTGGTTGTGCGGTGCACGAACACGGATGCGCGAGCTGTGC CTCGGTTTGACTCGCTCAAATTCGATTTCGGCTGCTCGATTTCTTGGTGATCATCGGGTT GATCCTGTTCGATCGATTCGTCATTGATCGCCTCGTGACAACGATAGGTGTGGTTGTAAT TGGCGGATTGATGAGAAACAGCACGGTGTGTCCGCGTGTGGAGGAAATGAAAGCATTCAA GATGGGGGGGTCGCCGGCTGATGGATATGATAACTCAAAGTTTGTATCCATCTTCTTCAT ACGATTAGGGTTGATGCAAGTGGTCCGCAGGGTGAAGCTGTAGTAGACTTGTAGCCTCCA AAGTGGAATGTGCTTGCTCTGCTTGTTATTAGCTCTGTAATTTGCTTGTACTCCTCTTGC AAAACGTAATTTGTCAAGGCTGTATATTTCAGATAGCT



consensusID : consensus_12903#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1221
fasta sequence
                              [GCCGCGATCGTGCGAGGGGCACTTGCATTTCCCCGCGAGATTTTTACGATGAAGACCGCATCGTCGTCGTCGTCGTCGTCGCACGGGTTCCCGGCCACCGCCTCGCTCTGCACCCCGTATCTCCTGCTGGTGCCGCTCGGCCTCCTCGCCGTGGTGCTCGTCGTCCCCAGCCTCGGCTCCTCCCACGTCCGCTCCGACGGCCTCGGCGTCCTCTGCCACGCCGGCCCATCCACCGCCGACGGCTACCTCGTCACGCCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACGAAGGCCGTCGTGCGGCCG-GAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGC-GGATGTTCGCGTCGTCGCCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCG-TGGCCGCGC-TGGTCG-ACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTCGGCGACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCGACGTGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTCCTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGGCCGCGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGGCTCCAGCCGTCCAACCTGTACCACTTCCCATGATCGATCAATTTTTGTTTTGTATATTCTGATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCGCCATGGTAGCGTACGCCATTCACATTCTTTCTCTGGAATTTGTTATTTAGCAATTGGTTCCNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK106115             [GCCGCGATCGTGCGAGGGGCACTTGCATTTCCCCGCGAGATTTTTACGATGAAGACCGCATCGTCGTCGTCGTCGTCGTCGCACGGGTTCCCGGCCACCGCCTCGCTCTGCACCCCGTATCTCCTGCTGGTGCCGCTCGGCCTCCTCGCCGTGGTGCTCGTCGTCCCCAGCCTCGGCTCCTCCCACGTCCGCTCCGACGGCCTCGGCGTCCTCTGCCACGCCGGCCCATCCACCGCCGACGGCTACCTCGTCACGCCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACGAAGGCCGTCGTGCGGCCG GAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGC GGATGTTCGCGTCGTCGCCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCG TGGCCGCGC TGGTCG ACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTCGGCGACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCGACGTGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTCCTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGGCCGCGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGGCTCCAGCCGTCCAACCTGTACCACTTCCCATGATCGATCAATTTTTGTTTTGTATATTCTGATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCGCCATGGTAGCGTACGCCATTCACATTCTTTCTCTGGAATTTGTTATTTAGCAAT                                          ]
[+] EMBL AK060938             [GCCGCGATCGTGCGAGGGGCACTTGCATTTCCCCGCGAGATTTTTACGATGAAGACCGCATCGTCGTCGTCGTCGTCGTCGCACGGGTTCCCGGCCACCGCCTCGCTCTGCACCCCGTATCTCCTGCTGGTGCCGCTCGGCCTCCTCGCCGTGGTGCTCGTCGTCCCCAGCCTCGGCTCCTCCCACGTCCGCTCCGACGGCCTCGGCGTCCTCTGCCACGCCGGCCCATCCACCGCCGACGGCTACCTCGTCACGCCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACGAAGGCCGTCGTGCGGCCG GAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGC GGATGTTCGCGTCGTCGCCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCG TGGCCGCGC TGGTCG ACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTCGGCGACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCGACGTGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTCCTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGGCCGCGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGGCTCCAGCCGTCCAACCTGTACCACTTCCCATGATCGATCAATTTTTGTTTTGTATATTCTGATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCGCCATGGTAGCG                                                                                     ]
[+] EMBL C72735               [                                                                                                                                                                                                                                                          cagacnCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACGAAGGCCGTCGTGCGGCCGNNAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCNGCCGCGTGGCCGACCCGGTGGACGCGCA NTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGC GGATGTTCGCGTCGTCG CCTACGACTACGTGATGAAGANCGACGACGACACGTACCTTCGCGTTGGNCGCGCTTGGTCG ACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB619209             [                                                                                                                                                                                                                                                                                               TGCTGCTGAGACGAAGGCCGTCGTGCGGCCG GAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGTTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAGCTGGTGGCGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGC GGATGTTCGCGTCGTCGCCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCG TGGCCGCGC TGGTCG ACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTCGGCGACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCGACGTGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTCCTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGGCCGCGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTGCACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGGCTCCAGCCGTCCAACCTGT                                                                                                                                                                                      ]
[+] EMBL AU065438             [                                                                                                                                                                                                                                                                                                             AGGCCGTCGTGCGGCGG NAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGNCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCA NTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTCTCCTTCGTGCCGC GGATGTTCGCGTCGTCGNCCTACGACTACGTGATGAAGACCCACGACGACAAGTACCTCCGCG TNGCCG GCTTGGTCGAACGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU065435             [                                                                                                                                                                                                                                                                                                             AGGCCGTCGTGCGGCGN NAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGGTACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGCGTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCA NTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAACATGAACGACGGCAAGACGCACGAGTACCTNTCCTNCGTGCCGCGGGATGTTCGGNTCGTCG CCTAGGACTACGTGATGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU172530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTCCTCGTCGGGAAATGGCTCAACATCGGCCNCCGGGGCAANAACCGGTACAGCCTCAGGCCNCGGATGTACGNCCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTNGTGCACATGCTCAAGGACAACCNCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGGCTCCANCCGTCCAACCTGTACCNCTTCCCATGATCGATCAATTTTTGTTTTGTATATTCTGATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCCCCATGGTAGCGTACGCCATTCNCATTCTTTNTNTGGAATTTGTTATTTAGCAATTGGTTCCNTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12903#1 GCCGCGATCGTGCGAGGGGCACTTGCATTTCCCCGCGAGATTTTTACGATGAAGACCGCA TCGTCGTCGTCGTCGTCGTCGCACGGGTTCCCGGCCACCGCCTCGCTCTGCACCCCGTAT CTCCTGCTGGTGCCGCTCGGCCTCCTCGCCGTGGTGCTCGTCGTCCCCAGCCTCGGCTCC TCCCACGTCCGCTCCGACGGCCTCGGCGTCCTCTGCCACGCCGGCCCATCCACCGCCGAC GGCTACCTCGTCACGCCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACG AAGGCCGTCGTGCGGCCGGAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGG TACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGC GTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAG CTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAACTGCACGGAGAAC ATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGCGGATGTTCGCGTCGTCG CCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCGTGGCCGCGCTGGTC GACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTCGGC GACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCGACG TGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGACCTC CTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGGCCG CGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTGCAC ATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCCGGG CTCCAGCCGTCCAACCTGTACCACTTCCCATGATCGATCAATTTTTGTTTTGTATATTCT GATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCGCCATGGTAGCGTACG CCATTCACATTCTTTCTCTGGAATTTGTTATTTAGCAATTGGTTCCNTTAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12903#0      ----------------------------------------------------------CG 2
consensus_12903#1      GCCGCGATCGTGCGAGGGGCACTTGCATTTCCCCGCGAGATTTTTACGATGAAGACCGCA 60
                                                                                 * 

consensus_12903#0      TTGTCTCC--CGTTGCATTTGCATGCGGCCATGGCGATGAAGGCGC-CGGCGTCGTCCAA 59
consensus_12903#1      TCGTCGTCGTCGTCGTCGTCGCACGGGTTCCCGGCCACCGCCTCGCTCTGCACCCCGTAT 120
                       * ***  *  *** *   * *** * *  *  *** *      *** * **  *    * 

consensus_12903#0      CTCCTACC--TCCTCCTCGCCCCGCTCGC---GCTGCTCCTCCTCGCCGCCGTCGTCTTC 114
consensus_12903#1      CTCCTGCTGGTGCCGCTCGGCCTCCTCGCCGTGGTGCTCGTCGTCCCCAGCCTCGGCTCC 180
                       ***** *   * *  **** **  *****   * ***** ** ** **  * *** ** *

consensus_12903#0      CTGCTCCCTTCTCTCAACGGCGCCCGCGTCGGCTCCGATGGCGGCCTCGGCGTCCTCTGC 174
consensus_12903#1      TCCCACGTCCGCTCCGACGGCCTCGGCGTCCTCTGCCACGCCGGCCCATCCACCGCCGAC 240
                          * *        * *****  * *****  ** * * * *****    *  *  *  *

consensus_12903#0      GCCCGCCGCAGCGC------TGGCGCCGAGGACTACACCGTCGCGGCGCCGGCGGCGCCG 228
consensus_12903#1      GGCTACCTCGTCACGCCGGGTGGAGATGCAGCTTCCGCTGCTGCTGCTGCTGCTGAGACG 300
                       * *  ** *  * *      *** *  *  *  * * * *  ** **  * ** * * **

consensus_12903#0      AAGGAGGAGGAGAAGCCCGAGCTGAGCCTGCTCGTCGGCGTCCTGACGATGCCGAAGCGG 288
consensus_12903#1      AAGGCCGTCGTGCGGCCGGAGCTCCGTCTGCTGGTGGGGGTGCTGACGACGCCGAAGCGG 360
                       ****  *  * *  *** *****  * ***** ** ** ** ******* **********

consensus_12903#0      TACGAGCGCCGCGACATCGTGCGGCTGGCGTACGCGCTGCAGCCGGCGGCGGCGC--GG- 345
consensus_12903#1      TACGAGCGTCGCAACATCGTGCGCCTGGCGTACGCGCTGCAGCCGGCGGTGCCCCCCGGC 420
                       ******** *** ********** ************************* * * *  ** 

consensus_12903#0      ---GCGCGGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAG 402
consensus_12903#1      GTCGCGCAGGTGGACGTCCGCTTCGTGTTCTGCCGCGTGGCCGACCCGGTGGACGCGCAG 480
                          **** ****************************************************

consensus_12903#0      CTGGTGGCGCTGGAGGCCGCGCGCCACGGCGACGTCGTGGTGCTCGGCGGCTGCGAGGAG 462
consensus_12903#1      CTGGTGGTGCTGGAGGCCGCGCGGCACGGCGACATCCTGGTGCTCAAC---TGCACGGAG 537
                       ******* *************** ********* ** ********  *   ***  ****

consensus_12903#0      AACATGAACCACGGCAAGACGCACGCGTACCTCTCCTCCGTGCCGCGCCTGTTCGCGTCG 522
consensus_12903#1      AACATGAACGACGGCAAGACGCACGAGTACCTCTCCTCCGTGCCGCGGATGTTCGCGTCG 597
                       ********* *************** *********************  ***********

consensus_12903#0      TCCCCCTACGACTACGTCATGAAGACCGACGACGACACGTACCTCCGCGTGGCGGCGCTC 582
consensus_12903#1      TCGCCCTACGACTACGTGATGAAGACCGACGACGACACGTACCTCCGCGTGGCCGCGCTG 657
                       ** ************** *********************************** ***** 

consensus_12903#0      GCCGACGAGCTCCGCGGCAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTACGCCATG 642
consensus_12903#1      GTCGACGAGCTCCGGCACAAGCCCCGCGACGACGTCTACCTCGGCTACGGCTTCGCCGTC 717
                       * ************   *********************************** **** * 

consensus_12903#0      GGCGGCCAGCCGATGCCGTTCATGCACGGCATGGGGTACGTCGTGTCGTGGGACGTCGCG 702
consensus_12903#1      GGCGACGACCCGATGCAGTTCATGCACGGGATGGGCTACGTCGTGTCCTGGGACGTCGCG 777
                       **** * * ******* ************ ***** *********** ************

consensus_12903#0      ACGTGGGTGTCCACGGCGGAGGAGATCCTCGCGCGCAACGACACGGAGGGGCCCGAGGAC 762
consensus_12903#1      ACGTGGGTGTCGACCAACGAGGACATCCTGCGGTACAACGACACGCACGGCCCCGAGGAC 837
                       *********** **    ***** *****   *  ********** * ** *********

consensus_12903#0      CTCATGGTCGGGAAGTGGCTCAACCTCGCCGGACGCGGCCGGAATCGCTACGACCTCAAG 822
consensus_12903#1      CTCCTCGTCGGGAAATGGCTCAACATCGGCCGCCGGGGCAAGAACCGGTACAGCCTCAGG 897
                       *** * ******** ********* *** * * ** ***  *** ** ***  ***** *

consensus_12903#0      CCGCGGATGTACGACCTCAGCTGGGACATGGACAACTTCCGGCCGGACACCGTCGCCGTG 882
consensus_12903#1      CCGCGGATGTACGACCTCAACTGGGACATGGACAACTTCCGGCCGGACACCGTCCTCGTG 957
                       ******************* **********************************  ****

consensus_12903#0      CACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGCTACTTCAACGTCACCGCC 942
consensus_12903#1      CACATGCTCAAGGACAACCGCCGGTGGGCGGCGGCGTTCAGGTACTTCAACGTCACCGCC 1017
                       ***************************************** ******************

consensus_12903#0      GGGATCAACCTGCACCACCTCTCACCATGATCGATCGATCGATCGATCACCTCTTCGATG 1002
consensus_12903#1      GGGCTCCAGCCGTCCAACCTGT-ACCACTTCCCAT-GATCGATCAATTTTTGTTTTGTAT 1075
                       *** ** * * *  * **** * ****    * ** ******** **      ** *   

consensus_12903#0      ATCCATAATTGTTGTTTGTTAATTTCTTCCCCGT----TTGATTAATTCTAATTAACTAA 1058
consensus_12903#1      ATTC-TGATTGTTTTTATTTAATGTTGTTGAGGCGACGTTGGTTGATTCCGCCATGGTAG 1134
                       ** * * ****** **  ***** *  *    *     *** ** ****        ** 

consensus_12903#0      TCGTTCGACACAAAAATTAACGGGTTTAATTCGATTCGTGCATTGGTTGTGCGGTGCACG 1118
consensus_12903#1      -CGTACGCCATTCACATTC----TTTCTCTGGAATTTGTTATTTAGCAATTGGTTCCNTT 1189
                        *** ** **   * ***      **   *   *** **   ** *   *  * * *   

consensus_12903#0      AACACGGATGCGCGAGCTGTGCCTCGGTTTGACTCGCTCAAATTCGATTTCGGCTGCTCG 1178
consensus_12903#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------- 1221
                       ** *   *      *                *                            

consensus_12903#0      ATTTCTTGGTGATCATCGGGTTGATCCTGTTCGATCGATTCGTCATTGATCGCCTCGTGA 1238
consensus_12903#1      ------------------------------------------------------------
                                                                                   

consensus_12903#0      CAACGATAGGTGTGGTTGTAATTGGCGGATTGATGAGAAACAGCACGGTGTGTCCGCGTG 1298
consensus_12903#1      ------------------------------------------------------------
                                                                                   

consensus_12903#0      TGGAGGAAATGAAAGCATTCAAGATGGGGGGGTCGCCGGCTGATGGATATGATAACTCAA 1358
consensus_12903#1      ------------------------------------------------------------
                                                                                   

consensus_12903#0      AGTTTGTATCCATCTTCTTCATACGATTAGGGTTGATGCAAGTGGTCCGCAGGGTGAAGC 1418
consensus_12903#1      ------------------------------------------------------------
                                                                                   

consensus_12903#0      TGTAGTAGACTTGTAGCCTCCAAAGTGGAATGTGCTTGCTCTGCTTGTTATTAGCTCTGT 1478
consensus_12903#1      ------------------------------------------------------------
                                                                                   

consensus_12903#0      AATTTGCTTGTACTCCTCTTGCAAAACGTAATTTGTCAAGGCTGTATATTTCAGATAGCT 1538
consensus_12903#1      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)