These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12905#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2513 fasta sequence [AGAAGAAGAAGAAGAAGAATCCATGGCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGGAGGTCGTCGCCATGCTGGATCTGCAGCGCCACCCCGATGGCGGGTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTCCGCCCTCCCTCCCCGCTGTAAGCTTGGCCATTTTCATCGGGTTGCTTGATCTCGCGTTGGATTGTGGATTGCTTCAATTAGAGGTCATTTCCACTTACAGATAGCTGTAATCGATGATTTCGGGTCCGGATACTGTGCTGATTATTGCGATTGGAGATATATTATAATGTAGTTCAGAAATCAGTGTGAGTTCATGATTCTACGGCAATATGCTCGTCAAGATCATCCTAGTTGTTTAATTGTTGTGTCTTTTGATCCTACTTTTTTGAAATAAACTGGAGTAATTATAATCTACTGAAGACACAGAAAAAGAAAAGGACTGTTTTCTTTGGGCACGAAATTCTGGTAATTAAAAAGTATTAGTAGAATCTGAGGCAGTAGGTGTTCTACACTCAGAGAGTCAAGGTTCCCCAAACTAGTCAAGAAGTGCAAACTATTGTTATTTCCTGGCAGTTTTCTTTTGTGTAGAAAATTCCTAAATAATGAAGTCTGACTTCTTATACTTTTTAGCAAAATCCAGGGGTATTTGGCATTATATGGCTCATTCTATGTGTTAGTACAATAATAACAGTAAGAACAACATGAATGAGATTCGAATTCTGTGTATATCCTGCCTACACTGGATTGTTATAATCGATCAGATTTTGTAGCTCCTAAACTAGATGATTTAATTTCTGATAAAAAAGCTTCATGAGTTAATAAAGGGTCAAACATTAGTACTCCAAACATTACTGCTAGGTTCTGAGCTTGCGGCCAGATGTATGTTCTGGATCGTGTATACTCTGGAGTCTTGACATGTCTACTAACTGTCCATCAATAAACTTGTGATGAGATAATAATTTCTCGCGCTCCTTGACTGCTTCCTTTCTCTTGTAAAGTAAATGTTAGCTCTTGTAACTAAGCGTATTTGACTGCTGATGCGTGCAATTTTTGACTTGGCAAAATTGGCCTAGCTGCATTTTTTCCCCCTGACCAAGGGGCAACTATCGCTGTCTCTCCTTTTGTGAAGGATACACAGCAAGAGTCTGGTCAGTAGTATATCCTGGTTTTTACATCTAGGAAGACTCAAAAAAGGGCATATCTGTAACTCACAGGCCATAGGAGTATTTGTTCAGAAGTATTATCAACATGACTTTGATTTGTCGTTACTTTTACATCATTATATTTGATTAGTGCAAATTTGGTCCTTTGATGCTATACACAACTCTTTCTCTTGCTAACTGTGCTTAGTCAATATTGGGTGCTGAGTCTTTAACTTCTCATTTATCCTAAAAAAAACACTTCTAAATTTGGGGTTTTCACATATCAGATTAGCACACCATTGAGCATGAGCCTGACAAACTTCATTTACTGTAACACACAGACCAGAGATGGTTCATAATTAACAGACTCAGTCCCATGATAGTATAAAATATCTTAGAGCATATTCTTTTTTTCTTTCTTTTGAATTGCAGGCAAAAGCTTTGACCACTTTTAGAGGTTATTCATCAATGCATTGTGTGGTGCCGCCCACTGTTAACTCCCTAGTTAACCGTCATAAGAGTAGAGTCTGCTTAACATTTTAGATTACCACATAATGTTAACTCCAATTTCAGTTCCTGTGAGCTACTATAGATTTATAAATAAAAATAACACATTATCTCTAATTCTGTCAATGTGTTTCATTCCTTGTAGATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCGCATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGAACCTCTCACGGTCAGCAAATTTTAACATAAATATCAAATTAACATAACTTCTTGACTAACCCCATTTTTTTTCAGGTATTTGAAGTGCATGACGATGGACAATTCAAGATGACAGTTGTTGGACCTGATCTACGGCATGGCCAAAAGCCACAATACACAGTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAAGATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTCTGAGCTGCACTACTCTTTCGTCGGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATAAAAAA] [+] EMBL AK070593 [AGAAGAAGAAGAAGAAGAATCCATGGCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGGAGGTCGTCGCCATGCTGGATCTGCAGCGCCACCCCGATGGCGGGTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTCCGCCCTCCCTCCCCGCTGTAAGCTTGGCCATTTTCATCGGGTTGCTTGATCTCGCGTTGGATTGTGGATTGCTTCAATTAGAGGTCATTTCCACTTACAGATAGCTGTAATCGATGATTTCGGGTCCGGATACTGTGCTGATTATTGCGATTGGAGATATATTATAATGTAGTTCAGAAATCAGTGTGAGTTCATGATTCTACGGCAATATGCTCGTCAAGATCATCCTAGTTGTTTAATTGTTGTGTCTTTTGATCCTACTTTTTTGAAATAAACTGGAGTAATTATAATCTACTGAAGACACAGAAAAAGAAAAGGACTGTTTTCTTTGGGCACGAAATTCTGGTAATTAAAAAGTATTAGTAGAATCTGAGGCAGTAGGTGTTCTACACTCAGAGAGTCAAGGTTCCCCAAACTAGTCAAGAAGTGCAAACTATTGTTATTTCCTGGCAGTTTTCTTTTGTGTAGAAAATTCCTAAATAATGAAGTCTGACTTCTTATACTTTTTAGCAAAATCCAGGGGTATTTGGCATTATATGGCTCATTCTATGTGTTAGTACAATAATAACAGTAAGAACAACATGAATGAGATTCGAATTCTGTGTATATCCTGCCTACACTGGATTGTTATAATCGATCAGATTTTGTAGCTCCTAAACTAGATGATTTAATTTCTGATAAAAAAGCTTCATGAGTTAATAAAGGGTCAAACATTAGTACTCCAAACATTACTGCTAGGTTCTGAGCTTGCGGCCAGATGTATGTTCTGGATCGTGTATACTCTGGAGTCTTGACATGTCTACTAACTGTCCATCAATAAACTTGTGATGAGATAATAATTTCTCGCGCTCCTTGACTGCTTCCTTTCTCTTGTAAAGTAAATGTTAGCTCTTGTAACTAAGCGTATTTGACTGCTGATGCGTGCAATTTTTGACTTGGCAAAATTGGCCTAGCTGCATTTTTTCCCCCTGACCAAGGGGCAACTATCGCTGTCTCTCCTTTTGTGAAGGATACACAGCAAGAGTCTGGTCAGTAGTATATCCTGGTTTTTACATCTAGGAAGACTCAAAAAAGGGCATATCTGTAACTCACAGGCCATAGGAGTATTTGTTCAGAAGTATTATCAACATGACTTTGATTTGTCGTTACTTTTACATCATTATATTTGATTAGTGCAAATTTGGTCCTTTGATGCTATACACAACTCTTTCTCTTGCTAACTGTGCTTAGTCAATATTGGGTGCTGAGTCTTTAACTTCTCATTTATCCTAAAAAAAACACTTCTAAATTTGGGGTTTTCACATATCAGATTAGCACACCATTGAGCATGAGCCTGACAAACTTCATTTACTGTAACACACAGACCAGAGATGGTTCATAATTAACAGACTCAGTCCCATGATAGTATAAAATATCTTAGAGCATATTCTTTTTTTCTTTCTTTTGAATTGCAGGCAAAAGCTTTGACCACTTTTAGAGGTTATTCATCAATGCATTGTGTGGTGCCGCCCACTGTTAACTCCCTAGTTAACCGTCATAAGAGTAGAGTCTGCTTAACATTTTAGATTACCACATAATGTTAACTCCAATTTCAGTTCCTGTGAGCTACTATAGATTTATAAATAAAAATAACACATTATCTCTAATTCTGTCAATGTGTTTCATTCCTTGTAGATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCGCATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGAACCTCTCACGGTCAGCAAATTTTAACATAAATATCAAATTAACATAACTTCTTGACTAACCCCATTTTTTTTCAGGTATTTGAAGTGCATGACGATGGACAATTCAAGATGACAGTTGTTGGACCTGATCTACGGCATGGCCAAAAGCCACAATACACAGTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAAGATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTCTGAGCTGCACTACTCTTTCGTCGGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACT ] [+] EMBL AU108896 [ GTCAAAACGCCTGGAAGAGACTCTGAGCTGCACTACTCTTTCGTCGGTGTANCCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTNCGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAANCCCTGAGGCCTGANGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATAAAAAA] consensusID : consensus_12905#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 812 fasta sequence [GCGCTCACGAGCGTGGAGAAGAAGACGGCGGCGGAGATCGTCGCCATGCTGGATCTGCAGCGCCACCCCGACGGCGGCTTCTACCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTCCG-GCTCCCTCCACGCTATAAGGTAGACCGTTCTGGGAGCAGTGCCATCTATTTCCTGCTGCCTGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGAACCTCTCACGGTATTTGAGGTCCATGACGATGGACAGATCAAGATGACAGTCGTTGGACCTGATCCTACGGCATGNCNAAAGGCCACAATACACAGTCCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAAGAT-GGAAGTGTATT-TGTCAAAACG-CCAGGA-AGAGACCCTGAACTTC-ACTACTC-TTTCGTCGGTGTAACCTGTG-CTCCAGCATTCCAGTTTGAGGACAACGA-AATGGCAACA-CGGG-AGACCATGAAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAACCATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCAAGCTACTGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTG-TTCA-GGACTCGCAATGCAGAAATCA-TGAGGCCTGAACCTTGCATATATCATCACTGTAT-C-AACTGGTTGTTTGGTTACATAGTTTTGACTCTTCTTTATGAAATATTCGTGATTGCTGACAAAAA] [+] EMBL OSR10431A [GCGCTCACGAGCGTGGAGAAGAAGACGGCGGCGGAGATCGTCGCCATGCTGGATCTGCAGCGCCACCCCGACGGCGGCTTCTACCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTCCGCGCTCCCTCCACGCTATAAGGTAGACCGTTCTGGGAGCAGTGCCATCTATTTCCTGCTGCCTGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGAACCTCTCACGGTATTTGAGGTCCATGACGATGGACAGATCAAGATGACAGTCGTTGGACC ] [+] EMBL AU162397 [ g tncCCTTCCACGCTATAAGNTAGACCGTTCTGGGAGCAGTNCCATCTATTTCCTGCTGCCNGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGAACCTCTCACGGTATTTGAGGTCCATGACGATGGACAGATCAAGATGACAGTCGTTGGACCTGATCCTACGGCATGNCNAAAGGCCACAATACACAGTCCCTCCAAATGTTTGGTTTGNCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAAGAT GGAAGTGTATT TGTCAAAACG CCAGGA AGAGACCCTGAACTTC ACTACTC TTTCGNCGGTGTAACCTGTG CTCCAGCATTCCAGTTTGAGGACAACGA AATGGCAACA CGGG AGACCATGAAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAACCATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCAAGCTACTGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTG TTCA GGACTCGCAATGCAGAAAaaa aaaaa ] [+] EMBL BI797111 [ CGTTATTTGAGGTCCATGACGATGGCCAGATCAAGATGCCAGTC TTGGACCTGAT CTACGGCATGGCCCAAAGCCAC ATACACAGTCCCTCCAAATGTTT GTTTGGCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAAGAT GGAAGTGTATT TGTCAAAACGCCCAGGA AGAGACCCTGAACTTC ACTACTC TTTCGTCGGTGTAACCTGTGCCTCCAGCATTCCAGTTTGAGGACAACGA AAT GCCACA CGGG AGACCATGAAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAACCATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCCAGCTACTGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTGCTTCA GGACTCGCAATGCAGAAATCACTGAGGCCTGAACCTTGCATATATCATCACTGTAT C AACTGGTTGTTTGGTTACATAGTTTTGACTCTTCTTTATGAAATATTCGTGATTGCTGACAAAAA] [+] EMBL BI811593 [ TGTTTGGTTTGGC CCCTCTTGACCGGCGACATTGAGTCCTTCACCGAAGATGGGAAGTGTATTGTGTCCAAACG CCAGGATAGAGACCCTGTACTTCAACTACTCTTTTCGTCGGTGTAACCTGTG CTCCAGCATTCCCGTTTGAGGACCACGATAATGGCCACACCGGGTAGACCCTGGAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAACCCTCACTCCCAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCCAGCTACTGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTG TTCACGGACTCGCCATGCAGAAATCA TGAGGCCTGAACCTTGCATATATCATCCCTGTATCC AACTGGTTGT ] [+] EMBL CB097095 [ ATT TGT AAAACG CCAGGA AGAGACCCTGAACTTC ACTACTC TTTCGTCGGTGTAACCTGTG CTCCAGCATTCCAGTTTGAGGACAACGA AATGGCAACA CGGG AGACCATGAAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGAGTCTGAAACCATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCAAGCTACTGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTG TTCA GGACTCGCAATGCAGAAATCA TGAGGCCTGAACCTTGCATATATCATCACTGTAT CAAACTGGTTGTTTGGTTACATAGTTTTGACTCTT TTTATGA ] consensusID : consensus_12905#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 751 fasta sequence [CCNCGCTATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACNTGCTGGAGAGATCGTTAAGTTGCATC-GCATCCCTTGTGC-TGAGACCTGGCACTACTACATGGGGGAACCTCTCACCGGTATNTGAATTGCATGACGATGGACAATTCAAGATGACAGTTGTTGGACCTGATTTAC-GGCATGGCCAAAAGCCACAATACACAGTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAAGATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTTTGAGCTGCACTACTCTTTNGTCGGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATATTCAGTTTGTTTCTCCTGGCAGAACCACTTTTCTTCTCAAGGCCTATTCTCATGTGTCCCAAAAAAATCTCTGCTCCCAAATGTATCCTCTTTGGTAATCAACCTCTAATATTGCCCTAAAAAA] [-] EMBL CA759064 [CCNCGCTATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACNTGCTGGAGAGATCGTTAAGTTGCATC GCATCCCTTGTGC TGAGACCTGGCACTACTACATGGGGGAACCTCTCACCGGTATNTGAATTGCATGACGATGGACAATTCAAGATGACAGTTGTTGGACCTGATTTAC GGCATGGCCAAAAGCCACAATACACAGTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAAGATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTTTGAGCTGCACTACTCTTTNGTCGGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATATTCAGTTTGTTTCTCCTGGCAGAACCACTTTTCTTCTCAAGGCCTATTCTCATGTGTCCCAAAAAAA ] [+] EMBL AU085765 [ TCGTTAAGTTGCATCGGCATCCCTTGTGCTTAAGACCTGGCATTACTACATGGGGNANCCTCTCA CGGTATTTGAAGTGCATGACGATGGNCAATTCAAGATGACAGTTGTTGGACNTGATCTACGGGCATGGCCAAAAGCCNCAATACACAGTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAAGATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTCTGAGCTGCACTACTCTTTCGTCGGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGCATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGAGTTTTATTCCACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTACTGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTGCATGTATCATCACTGACCAGTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATATTCAGTTTGTTTCTCCTGGCAGAACCACTTTTCTTCTCAAGGCCTATTCTCATCTGTCCCATTCTTCTCTCTGCTCCCAAATGTATCCTCTTTGGTAATCAACCTCTAATATTGCCCTAAAAAA] consensusID : consensus_12905#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 408 fasta sequence [AGAAGAAGAATCCATGGCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGTAGGTCGTCG-CATGCTGGATCTGCAGCGCCACCCCGATGGCGGNTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTNCGCCCTCCCTCCCCGCTATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCG-ATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGGAACCTCTCACGGTATTTGAAGTGCATGACGATGGGACAATTCAAGATGACAGTTTTTGGACCTGATCTACGGCATTGGCAAAAAGGCACAATACANAGTTCCTTCAAATGTTTGGTTTNGGGCTTTCTTGACCTNCGACA] [+] EMBL C27408 [AGAAGAAGAATCCATGGCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGTAGGTCGTCG CATGCTGGATCTGCAGCGCCACCCCGATGGCGGNTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTNCGCCCTCCCTCCCCGCTATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCG ATCCCTTGTGCTGAGACCTGGCACTACTACATGGGGGGAACCTCTCACGGTATTTGAAGTGCATGACGATGGGACAATTCAAGATGACAGTTTTTGGACCTGATCTACGGCATTGGCAAAAAGGCACAATACANAGTTCCTTCAAATGT ] [+] EMBL C27747 [ GAATCCATGGCGGCCACGGGCTCGGAGAAGAAGACGGCGGCGGAGGTCGTCGCCATGCTGGATCTGCAGCGCCACCCCGATGGCGGGTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCCCCAAGTCCGCCCTCCCTCCCCGCTATAAGGTAGACCGTGCTGTGAGCAATGCCATATATTTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCGCATCCCTTGTNCTGAGACCTGGCACTACTACAT GGGGGAACCTCTCACGGTATTTGAAGTGCATGACGAT GGACAATTCAAGATGACAGTTGTTGGACCTGATCTACGGCA TGGCCAAAAGCCACAATACACAGTTCCTCCAAATGTTTGGTTTNGGGCTTTCTTGACCTNCGACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 AGAAGAAGAAGAAGAAGAATCCATGGCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGGA 60 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GGTCGTCGCCATGCTGGATCTGCAGCGCCACCCCGATGGCGGGTTCATCCTGGAGACCTT 120 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CCGCGACCCCTCCATCTCCCTCCCCAAGTCCGCCCTCCCTCCCCGCTGTAAGCTTGGCCA 180 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TTTTCATCGGGTTGCTTGATCTCGCGTTGGATTGTGGATTGCTTCAATTAGAGGTCATTT 240 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CCACTTACAGATAGCTGTAATCGATGATTTCGGGTCCGGATACTGTGCTGATTATTGCGA 300 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TTGGAGATATATTATAATGTAGTTCAGAAATCAGTGTGAGTTCATGATTCTACGGCAATA 360 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TGCTCGTCAAGATCATCCTAGTTGTTTAATTGTTGTGTCTTTTGATCCTACTTTTTTGAA 420 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 ATAAACTGGAGTAATTATAATCTACTGAAGACACAGAAAAAGAAAAGGACTGTTTTCTTT 480 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GGGCACGAAATTCTGGTAATTAAAAAGTATTAGTAGAATCTGAGGCAGTAGGTGTTCTAC 540 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 ACTCAGAGAGTCAAGGTTCCCCAAACTAGTCAAGAAGTGCAAACTATTGTTATTTCCTGG 600 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CAGTTTTCTTTTGTGTAGAAAATTCCTAAATAATGAAGTCTGACTTCTTATACTTTTTAG 660 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CAAAATCCAGGGGTATTTGGCATTATATGGCTCATTCTATGTGTTAGTACAATAATAACA 720 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GTAAGAACAACATGAATGAGATTCGAATTCTGTGTATATCCTGCCTACACTGGATTGTTA 780 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TAATCGATCAGATTTTGTAGCTCCTAAACTAGATGATTTAATTTCTGATAAAAAAGCTTC 840 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 ATGAGTTAATAAAGGGTCAAACATTAGTACTCCAAACATTACTGCTAGGTTCTGAGCTTG 900 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CGGCCAGATGTATGTTCTGGATCGTGTATACTCTGGAGTCTTGACATGTCTACTAACTGT 960 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CCATCAATAAACTTGTGATGAGATAATAATTTCTCGCGCTCCTTGACTGCTTCCTTTCTC 1020 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TTGTAAAGTAAATGTTAGCTCTTGTAACTAAGCGTATTTGACTGCTGATGCGTGCAATTT 1080 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TTGACTTGGCAAAATTGGCCTAGCTGCATTTTTTCCCCCTGACCAAGGGGCAACTATCGC 1140 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TGTCTCTCCTTTTGTGAAGGATACACAGCAAGAGTCTGGTCAGTAGTATATCCTGGTTTT 1200 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TACATCTAGGAAGACTCAAAAAAGGGCATATCTGTAACTCACAGGCCATAGGAGTATTTG 1260 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TTCAGAAGTATTATCAACATGACTTTGATTTGTCGTTACTTTTACATCATTATATTTGAT 1320 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TAGTGCAAATTTGGTCCTTTGATGCTATACACAACTCTTTCTCTTGCTAACTGTGCTTAG 1380 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TCAATATTGGGTGCTGAGTCTTTAACTTCTCATTTATCCTAAAAAAAACACTTCTAAATT 1440 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TGGGGTTTTCACATATCAGATTAGCACACCATTGAGCATGAGCCTGACAAACTTCATTTA 1500 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 CTGTAACACACAGACCAGAGATGGTTCATAATTAACAGACTCAGTCCCATGATAGTATAA 1560 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 AATATCTTAGAGCATATTCTTTTTTTCTTTCTTTTGAATTGCAGGCAAAAGCTTTGACCA 1620 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 --------------------------------------------AGAAGAAGAATCCATG 16 consensus_12905#0 CTTTTAGAGGTTATTCATCAATGCATTGTGTGGTGCCGCCCACTGTTAACTCCCTAGTTA 1680 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 GCGCTCACGAGCGTGGAGAAGAAGACGGCGGCGGAGATCGTCGCC--ATGCTGGATCTGC 58 consensus_12905#3 GCGGCCACGAGCTCGGAGAAGAAGACGGCGGCGTAGGTCGTCGC---ATGCTGGATCTGC 73 consensus_12905#0 ACCGTCATAAGAGTAGAGTCTGCT-TAACATTTTAGATTACCACATAATGTTAACTCCAA 1739 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 AGCGCCACCCCGACGGCGGCTTCTACCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCC 118 consensus_12905#3 AGCGCCACCCCGATGGCGGNTTCATCCTGGAGACCTTCCGCGACCCCTCCATCTCCCTCC 133 consensus_12905#0 TTTCAGTTCCTGTGAGCTACTATAGATTTATAAATAAAAATAACACATTATCTCTAATTC 1799 consensus_12905#2 ------------------------------------------------------------ consensus_12905#1 CCAAGTCCGGC-TCCCTCCACGCT-ATAAGGTAGACCGTTCTGGGAGCAGTGCCATCTAT 176 consensus_12905#3 CCAAGTNCGCCCTCCCTCCCCGCT-ATAAGGTAGACCGTGCTGTGAGCAATGCCATATAT 192 consensus_12905#0 TGTCAATGTGTTTCATTCCTTGTAGATAAGGTAGACCGTGCTGTGAGCAATGCCATATAT 1859 consensus_12905#2 -----------------CCNCGCT-ATAAGGTAGACCGTGCTGTGAGCAATGCCATATAT 42 ** * ************** *** ***** ****** *** consensus_12905#1 TTCCTGCTGCCTGCTGGAGAGATTGCTAAGTTGCACCGCATCCCTTGTGCTGAGACCTGG 236 consensus_12905#3 TTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCG-ATCCCTTGTGCTGAGACCTGG 251 consensus_12905#0 TTCCTGCTACCTGCTGGAGAGATCGTTAAGTTGCATCGCATCCCTTGTGCTGAGACCTGG 1919 consensus_12905#2 TTCCTGCTACNTGCTGGAGAGATCGTTAAGTTGCATCGCATCCCTTGTGCTGAGACCTGG 102 ******** * ************ * ********* ** ********************* consensus_12905#1 CACTACTACATGGGGG-AACCTCTCACGG------------------------------- 264 consensus_12905#3 CACTACTACATGGGGGGAACCTCTCACGG------------------------------- 280 consensus_12905#0 CACTACTACATGGGGG-AACCTCTCACGGTCAGCAAATTTTAACATAAATATCAAATTAA 1978 consensus_12905#2 CACTACTACATGGGGG-AACCTCTCACCG------------------------------- 130 **************** ********** * consensus_12905#1 -----------------------------T-----ATTTGAGGTCCATGACGATGG-ACA 289 consensus_12905#3 -----------------------------T-----ATTTGAAGTGCATGACGATGGGACA 306 consensus_12905#0 CATAACTTCTTGACTAACCCCATTTTTTTTCAGGTATTTGAAGTGCATGACGATGG-ACA 2037 consensus_12905#2 ---------------------------------GTATNTGAATTGCATGACGATGG-ACA 156 ** *** * *********** *** consensus_12905#1 GATCAAGATGACAGTCGTTGGACCTGATCCTACGGCAT-GNCNAAAGGCCACAATACACA 348 consensus_12905#3 ATTCAAGATGACAGTTTTTGGACCTGATC-TACGGCATTGGCAAAAAGGCACAATACANA 365 consensus_12905#0 ATTCAAGATGACAGTTGTTGGACCTGATC-TACGGCAT-GGCCAAAAGCCACAATACACA 2095 consensus_12905#2 ATTCAAGATGACAGTTGTTGGACCTGATT-TACGGCAT-GGCCAAAAGCCACAATACACA 214 ************* *********** ******** * * *** * ********* * consensus_12905#1 GTCCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATTGAGTCCTTCACCGAA 408 consensus_12905#3 GTTCCTTCAAATGTTTGGTTTNGGGCTTTCTTGACCTNCGACA----------------- 408 consensus_12905#0 GTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAA 2155 consensus_12905#2 GTTCCTCCAAATGTTTGGTTTGGCGCCTTCTTGACCTGCGACATCGAGTCCTTCACCGAA 274 ** *** ************** * ** ********** ***** consensus_12905#1 GATGGAAGTGTATTTGTCAAAACGCCAGGAAGAGACCCTGAACTTCACTACTCTTTCGTC 468 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTCTGAGCTGCACTACTCTTTCGTC 2215 consensus_12905#2 GATGGAAGTGTGTTTGTCAAAACGCCTGGAAGAGACTTTGAGCTGCACTACTCTTTNGTC 334 consensus_12905#1 GGTGTAACCTGTGCTCCAGCATTCCAGTTTGAGGACAACGAAATGGCAACACGGGAGACC 528 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGC 2275 consensus_12905#2 GGTGTAACCTGTGCTCCAGCATTCCAGATTGAAGACGACGAAATGGCAACACGGGAGAGC 394 consensus_12905#1 ATGAAGACACTTGCTCCTAAAGCCGAAGCTTTCATCAACTACCTTGTTCCTTCAGACTGA 588 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 ATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGA 2335 consensus_12905#2 ATGAAAGCTTTGGCTCCTAAAGCAGAAGCTTTCATCAACTACCTTGTGCCTTCAGACTGA 454 consensus_12905#1 GTCTGAAACCATCACTCCAAGTAGCTTGCTCTTCGTGATGAACTTTATGTACCAAGCTAC 648 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GTTTTATTC---CACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTAC 2392 consensus_12905#2 GTTTTATTC---CACTCCAAGTAGCTCGCTCTACGTAATGAACTGTATGTACCAAGCTAC 511 consensus_12905#1 TGATTCAGTACTGATGTTTACTGCTTGATCTGAGATCTGTTCAGGACTCGCAATGCAGAA 708 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 TGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTG--CATGTATCATCACTGACCA 2450 consensus_12905#2 TGATGTTTGCAGGGCAGAAACCCTGAGGCCTGAAGCTTG--CATGTATCATCACTGACCA 569 consensus_12905#1 ATCATGAGGCCTGAACCTTGCATATATCATCACTGTATCAACTGGTTGTTTGGTTACATA 768 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 GTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATAAA 2510 consensus_12905#2 GTTAGTAGTATTTAGTATTGGTTTGGTGACATAGTTTCTCACTATTTTTTCGGAAATATT 629 consensus_12905#1 GTTTTGACTCTTCTTTATGAAATATTCGTGATTGCTGACAAAAA---------------- 812 consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 AAA--------------------------------------------------------- 2513 consensus_12905#2 CAGTTTGTTTCTCCTGGCAGAACCACTTTTCTTCTCAAGGCCTATTCTCATGTGTCCCAA 689 consensus_12905#1 ------------------------------------------------------------ consensus_12905#3 ------------------------------------------------------------ consensus_12905#0 ------------------------------------------------------------ consensus_12905#2 AAAAATCTCTGCTCCCAAATGTATCCTCTTTGGTAATCAACCTCTAATATTGCCCTAAAA 749 consensus_12905#1 -- consensus_12905#3 -- consensus_12905#0 -- consensus_12905#2 AA 751 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||