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Oryza sativa
cluster # 12928 cluster # 12928       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12928#0 length = 1967 sequences # 3  
consensus_12928#1 length = 1802 sequences # 5  
consensus_12928#2 length = 1316 sequences # 2  
consensus_12928#3 length = 499 sequences # 1  

consensusID : consensus_12928#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1967
fasta sequence
                              [CTGTGTGACTGATCTCTCACGTTGCAGCCGCGGCCCCGCGCGGCTCCCCTCCCCCCACCGACCGGCATGGCGACACCCAGAAAAACCTCCAAAATCACCGCGAAAACACCGCGCGCCACCGTGATCTGACTGACTGATCTGATCTCTCACGTTCTAGCGGCGCACCGCGCACGCGGACCCGCACACGCGAGAGAGCGCGCGCGCGCACGGCGATTCGGTCGTCCTCCTCCGGTTTACTACTACTAGTACTTGCCACCTTCCCGACGACGTCGCCGTCGTCGTCGTCGGCGCGCGCGCGCCTCTCTCTCTCTCAAAGGAGTGGACTGCGTGCTAGTGCTAGTGCTACAGGCTACGGGTCGAGAAAGGCGAGGCCACCAGCAGAGAGCAAGCTGAGGGAGGAGACGGGGCGGCCTCTCCGCCTTGCAGATCTCGCATGCGCGGGCGGAGTGGACGGCGGCGGAGGAGGCGGCGGAGGAGGAGGGCGCAGTAGGGGAGGCGTACGGGCGGCGGCGGCGGCGGCATGGGCGGGGCGAGGCTGGGGAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGCTGGCGCTCTCCTCCAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGTTGGTGGCTACTCTTACTTGCTTGAACCATTGTGGTGGGCAGGAATGACAGCAATGATTGTTGGAGAAATCGCCAACTTCGCAGCTTATGCTTTTGCTCCTGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGTGCTGTTCTTGCACACATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGTATTCTTTGTGTTGTGGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATTGAGTCTGTGGCAGAAGTATGGGATCTAGCTACTGAACCAGCATTTCTACTATATGCAGCCATTGTGCTTGCAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACCCATATCATGGTGTATATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTCATGAGTGTCAAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGACTGGGATCGTCAAGATCCAACACAAATTGTCACGGAGATGTGCGGTTTTG-TTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGATATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACCTAAACACGCCGAGGAGGATGGTTATGCTGCTGAAGGAATTCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAACCTGCTAATGCTTGCAACCGTGCTTCAAGGTTTATACTCCAGCAGCAACGCTAGCTCCTCAATGTGGGAAGGGAAGAATCTCCATTCTTTCATTGGATACACACTCCATAGGTTGACTGTAGGATCCAAAGGTAACGGCTCGGCCCCCCCTGTAATTTTTTCAGACATCCGTACAAAATTTTGGGGGTCATTACATCAGTTATTATACATATCTTCGGGTGAGATAACCAGGATGGCCAAGAATCCCAAGTTCTGAACTGTAAATCGCTGTGAGCCATAGAGGTCATTGGTCTGGAACTGTTGTATTCTTTCAAATACAATAGGCAAATAGCTCACTCATAATACAAGAAGAGGTTAAGAGCCAACAANA]

[+] EMBL AK121054             [CTGTGTGACTGATCTCTCACGTTGCAGCCGCGGCCCCGCGCGGCTCCCCTCCCCCCACCGACCGGCATGGCGACACCCAGAAAAACCTCCAAAATCACCGCGAAAACACCGCGCGCCACCGTGATCTGACTGACTGATCTGATCTCTCACGTTCTAGCGGCGCACCGCGCACGCGGACCCGCACACGCGAGAGAGCGCGCGCGCGCACGGCGATTCGGTCGTCCTCCTCCGGTTTACTACTACTAGTACTTGCCACCTTCCCGACGACGTCGCCGTCGTCGTCGTCGGCGCGCGCGCGCCTCTCTCTCTCTCAAAGGAGTGGACTGCGTGCTAGTGCTAGTGCTACAGGCTACGGGTCGAGAAAGGCGAGGCCACCAGCAGAGAGCAAGCTGAGGGAGGAGACGGGGCGGCCTCTCCGCCTTGCAGATCTCGCATGCGCGGGCGGAGTGGACGGCGGCGGAGGAGGCGGCGGAGGAGGAGGGCGCAGTAGGGGAGGCGTACGGGCGGCGGCGGCGGCGGCATGGGCGGGGCGAGGCTGGGGAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGCTGGCGCTCTCCTCCAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGTGTTGGTGGCTACTCTTACTTGCTTGAACCATTGTGGTGGGCAGGAATGACAGCAATGATTGTTGGAGAAATCGCCAACTTCGCAGCTTATGCTTTTGCTCCTGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGTGCTGTTCTTGCACACATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGTATTCTTTGTGTTGTGGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATTGAGTCTGTGGCAGAAGTATGGGATCTAGCTACTGAACCAGCATTTCTACTATATGCAGCCATTGTGCTTGCAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACCCATATCATGGTGTATATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTCATGAGTGTCAAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGACTGGGATCGTCAAGATCCAACACAAATTGTCACGGAGATGTGCGGTTTTG TTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGATATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACCTAAACACGCCGAGGAGGATGGTTATGCTGCTGAAGGAATTCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAACCTGCTAATGCTTGCAACCGTGCTTCAAGGTTTATACTCCAGCAGCAACGCTAGCTCCTCAATGTGGGAAGGGAAGAATCTCCATTCTTTCATTGGATACACACTCCATAGGTTGACTGTAGGATCCAAAGGTAACGGCTCGGCCCCCCCTGTAATTTTTTCAGACATCCGTACAAAATTTTGGGGGTCATTACATCAGTTATTATACATATCTTCGGGTGAGATAACCAGGATGGCCAAGAATCCCAAGTTCTGAACTGTAAATCGCTGTGAGCCATAGAGGTCATTGGTCTGGAACTGTTGTATTCTTTCAAATACAATAGGCAAATAGCTCACTCATAATACAAGAAGAGGTT              ]
[+] EMBL OSR13201A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     nCTCTCGTGGGATCCTTATCGGTCATGAGTGTCAAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGANTNGGATCGTCAAGATCCAACACAAATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU031737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           tGCCAGTGTGATAATGTTCAAGGACT GGATCGTCAAGATCC ACACAAATTGTCACGGAGATGTGCGGTTTTGTTTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGATATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACTTAAACACGCCGAGGAGGATGGTTATGCTGCTGAAGGAATTCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAACNTGCTAATGCTTGCAACCGTGCTTCAAGGTTTATACTCCAGCAGCAACGCTAGCTCCTCAATGTGGGAAGGGAAGAATCTCCATTCTTTCATTGGATACACACTCCATAGGTTGACTGTAGGATCCAAAGGTAACGGNTCGGCCCCCCCTGTAATTTTTTCAGACATCCGTACAAAATTTTGGGGGTCATTACATCAGTTATTATACATATCTTCGGGTGAGATAACCAGGATGGCCAAG ATCCCAAGTTCTGAACTGTAAATCGCTGTGAGCCATAGAGGTCATTGGTCTGGAACTGTTGTA TCTTTCAAATACAATAGGCAAATAGCTCA TCAT ATACAAGAAGAGTTGAAGAGCCAACAANA]


>consensus_12928#0 CTGTGTGACTGATCTCTCACGTTGCAGCCGCGGCCCCGCGCGGCTCCCCTCCCCCCACCG ACCGGCATGGCGACACCCAGAAAAACCTCCAAAATCACCGCGAAAACACCGCGCGCCACC GTGATCTGACTGACTGATCTGATCTCTCACGTTCTAGCGGCGCACCGCGCACGCGGACCC GCACACGCGAGAGAGCGCGCGCGCGCACGGCGATTCGGTCGTCCTCCTCCGGTTTACTAC TACTAGTACTTGCCACCTTCCCGACGACGTCGCCGTCGTCGTCGTCGGCGCGCGCGCGCC TCTCTCTCTCTCAAAGGAGTGGACTGCGTGCTAGTGCTAGTGCTACAGGCTACGGGTCGA GAAAGGCGAGGCCACCAGCAGAGAGCAAGCTGAGGGAGGAGACGGGGCGGCCTCTCCGCC TTGCAGATCTCGCATGCGCGGGCGGAGTGGACGGCGGCGGAGGAGGCGGCGGAGGAGGAG GGCGCAGTAGGGGAGGCGTACGGGCGGCGGCGGCGGCGGCATGGGCGGGGCGAGGCTGGG GAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGCTGGCGCTCTCCTC CAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCAAGAAGGCCGGCGC CTCCGGCGTCCGCGCAGGTGTTGGTGGCTACTCTTACTTGCTTGAACCATTGTGGTGGGC AGGAATGACAGCAATGATTGTTGGAGAAATCGCCAACTTCGCAGCTTATGCTTTTGCTCC TGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGTGCTGTTCTTGCACA CATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGTATTCTTTGTGTTGT GGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATTGAGTCTGTGGCAGA AGTATGGGATCTAGCTACTGAACCAGCATTTCTACTATATGCAGCCATTGTGCTTGCAGC AGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACCCATATCATGGTGTA TATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTCATGAGTGTCAAAGCTCTTGGGAT AGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCACAGATGTGGGTGTT CTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTGAACAAGGCCCTTGA CACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTTACATCCTTGACCAT TTTGGCCAGTGTGATAATGTTCAAGGACTGGGATCGTCAAGATCCAACACAAATTGTCAC GGAGATGTGCGGTTTTGTTACAATCCTTTCTGGGACATTTCTTCTTCACAAGACAAAGGA TATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACCTAAACACGCCGAGGAGGA TGGTTATGCTGCTGAAGGAATTCCTCTCAGATCTGCTGCTGATGGCATTCCACTCAGGTC ACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAACCTGCTAATGCTTGCAACCGTGC TTCAAGGTTTATACTCCAGCAGCAACGCTAGCTCCTCAATGTGGGAAGGGAAGAATCTCC ATTCTTTCATTGGATACACACTCCATAGGTTGACTGTAGGATCCAAAGGTAACGGCTCGG CCCCCCCTGTAATTTTTTCAGACATCCGTACAAAATTTTGGGGGTCATTACATCAGTTAT TATACATATCTTCGGGTGAGATAACCAGGATGGCCAAGAATCCCAAGTTCTGAACTGTAA ATCGCTGTGAGCCATAGAGGTCATTGGTCTGGAACTGTTGTATTCTTTCAAATACAATAG GCAAATAGCTCACTCATAATACAAGAAGAGGTTAAGAGCCAACAANA



consensusID : consensus_12928#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1802
fasta sequence
                              [TAGTAGTAGCGGCCAAGTCCACACCGAGACATCACACAAACATCCCCGTCGCGTGGACTCGCGAACCCCAATTCCCCTCTCCCCTCCCACCCAACCTCGCCGTCGCCGTCGCCGTCGCCGCCGTCTCCGCCGCTCGATTTCTCCCCGCCCCCCACGCAGTCCAGAGCGGATCGAATGCGTGGCCCTCGCCGCCCGTAGCCTACCCCGGCCCGGAACGGCGAGCGCAGCCAGTCCCTCCTCGCCGCATCCGGATCTCCGCATGCGCCACGTCCGCGGCGGGATCTAGCGGCGTCGCACCCCCCGGAGGTTGTAGAAGGGTTTCCGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGG-GTGGA-GGGGATGTCGGCCGACAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGCGTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAATGATT-GTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGAC-TTTTCAGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCAGCGAACTGCAAGCAATCCCAGCCATTCTTTCATTCCATACAAATTGTAGATGTACTTTAGGTCTTATAAGGTAAAAGCTCGGCTCCCCTGTAATTTTTGAGACATCGGTACAGATTGGGGATAGATACCCCTTATACATCTCAAGATACCCAGAATGGGTTAGAATCAAAAAGGTTTTTTGGATGTAAATCCCGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTGGAACTGTTGTATTCTTTGAAATGAACAATTAGAAGTAGGAAGAGCAACTCCAAGAAGATACCATTGCTGACTTCCGTCAAGAACCTTTTTTTTTTACCTCCCCTTCATTCAGGCTGCTGGATCTATTTTCATTATC]

[+] EMBL AK102845             [TAGTAGTAGCGGCCAAGTCCACACCGAGACATCACACAAACATCCCCGTCGCGTGGACTCGCGAACCCCAATTCCCCTCTCCCCTCCCACCCAACCTCGCCGTCGCCGTCGCCGTCGCCGCCGTCTCCGCCGCTCGATTTCTCCCCGCCCCCCACGCAGTCCAGAGCGGATCGAATGCGTGGCCCTCGCCGCCCGTAGCCTACCCCGGCCCGGAACGGCGAGCGCAGCCAGTCCCTCCTCGCCGCATCCGGATCTCCGCATGCGCCACGTCCGCGGCGGGATCTAGCGGCGTCGCACCCCCCGGAGGTTGTAGAAGGGTTTCCGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGG GTGGA GGGGATGTCGGCCGACAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGCGTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAATGATT GTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGAC TTTTCAGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCAGCGAACTGCAAGCAATCCCAGCCATTCTTTCATTCCATACAAATTGTAGATGTACTTTAGGTCTTATAAGGTAAAAGCTCGGCTCCCCTGTAATTTTTGAGACATCGGTACAGATTGGGGATAGATACCCCTTATACATCTCAAGATACCCAGAATGGGTTAGAATCAAAAAGGTTTTTTGGATGTAAATCCCGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTGGAACTGTTGTATTCTTTGAAATGAACAATTAGAAGTAGGAAGAGCAACTCCAAGAAGATACCATTGCTGACTTCCGTCAAGAACCTTTTTTTTTTACCTCCCCTTCATTCAGGCTGCTGGATCTATTTTCATTATC]
[+] EMBL CA755038             [                                                      GGACTCGCGAACCCCAATTCCCCTCTCCCCTCCCACCCAACCTCGCCGTCGCCGTCGCCGTCGCCGCCGTCTCCGCCGCTCGATTTCTCCCCGCCCCCCACGCAGTCCAGAGCGGATCGAATGCGTGGCCCTCGCCGCCCGTAGCCTACCCCGGCCCGGAACGGCGAGCGCAGCCGGTCCCTCCTCGCCGCATCCGGATCTCCGCATGCGCCACGTCCGCGGCGGGATCTAGCGGCGTCGCACCCCCCGGAGGTTGTAGAAGGGTTTCCGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGA CTGGTGGGGAGGGGGATGTCGGNCGACNACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCGGCTTCATCGTCNAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCNGCGTCCGCGCAGGCNTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACNATGATTGGTTGGAGAAGTAGCTNACTTTGCAGCATATGCCTTTGCTCCTGCTATCTNAGT ACCCCACTTGGTGCGCTNAGCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB677005             [                                                                                            AACCTCTCCGTCGCCGTCGCCGTCGCCGCCGTCTCCGCCGCTCGATTTCTCCCCGCCCCCCACGCAGTCCAGAGCGGATCGAATGCGTGGCCCTCGCCGCCCGTAGCCTACCCCGGCCCGGAACGGCGAGCGCAGCCAGTCCCTCCTCGCCGCATCCGGATCTCCGCATGCGCCACGTCCGCGGCGGGATCTAGCGGCGTCGCACCCCCCGGAGGTTGTAGAAGGGTTTCCGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGCGTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGG GTGGA GGGGATGTCGGCCGACAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGCGTTGGAGGTTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAATGATT GTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGGGAAATTGATTCTGTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK058265             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 T GTTGGAGAAGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCGCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGCCTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGACTTTTTCAGGAATGAACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGACTGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCAGCGAACTGCAAGCAATCCCAGCCATTCTTTCATTCCATACAAATTGTAGATGTACTTTAGGTCTTATAAGGTAAAAGCTCGGCTCCCCTGTAATTTTTGAGACATCGGTACAGATTGGGGATAGATACCCCTTATACATCTCAAGATACCCAGAATAGGTTAGAATCAAAAAGGTTTTTTGGATGTAAATCCCGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTGGAACTGTTGTATTCTTTGAAATGAACAATTAGAAGTAGGAAGAGCAACTCCAAGAAGATACC                                                                          ]
[-] EMBL CB677006             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTAGTGTGATAATGTTCAAGGACTGGCATCGTCAAAATCCAACTCAAATTGTGACAGAGATGCGTGGTTTTGTTACCATCCTTTCTGGCACGTTTCTTCTTCACAAGACGAAACATATGGTAGATCGATTCCCACCAACTCTACCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTGTGATGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCCGTGAGTTGCAAGCAATCCCAGCCATTCTTTCATTCCATACACATTGTAGATCTTCTTTAGGTTTTATAAGGTAAAAATTCGGCTCC                                                                                                                                                                                                                                                                                       ]


>consensus_12928#1 TAGTAGTAGCGGCCAAGTCCACACCGAGACATCACACAAACATCCCCGTCGCGTGGACTC GCGAACCCCAATTCCCCTCTCCCCTCCCACCCAACCTCGCCGTCGCCGTCGCCGTCGCCG CCGTCTCCGCCGCTCGATTTCTCCCCGCCCCCCACGCAGTCCAGAGCGGATCGAATGCGT GGCCCTCGCCGCCCGTAGCCTACCCCGGCCCGGAACGGCGAGCGCAGCCAGTCCCTCCTC GCCGCATCCGGATCTCCGCATGCGCCACGTCCGCGGCGGGATCTAGCGGCGTCGCACCCC CCGGAGGTTGTAGAAGGGTTTCCGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGC GTCCACTTCGGCGGCCGCCGGTGCCGGGGGCGGGAGCTGGGTGGAGGGGATGTCGGCCGA CAACATCAAGGGGCTGGTGCTAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCAT CGTCAAGAAGAAGGGGCTCAAGAAGGCCGGCGCCTCCGGCGTCCGCGCAGGCGTTGGAGG TTACTCCTACTTGTATGAACCATTGTGGTGGGCTGGAATGATTACAATGATTGTTGGAGA AGTAGCTAACTTTGCAGCATATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGC GCTAAGCATCATCATCAGTGCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACAT ATTTGGTATACTTGGTTGTGTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGC GCCGCAGGAGCGTGAAATTGATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGC CTTTCTATTTTATGCAGTCACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTAT CCCCCAATATGGTCAGACACACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTC TCTCTCGGTCATGAGTGTGAAAGCACTTGGAATAGCCTTGAAACTGACTTTTCAGGAATG AACCAGCTAATCTATCCACAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTA ACTCAGATGAACTATCTAAACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCT ATATATTATACAATGTTTACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGAC TGGGATCGTCAAAATCCAACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTT TCTGGGACGTTTCTTCTTCACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTA CCTATCCGAATACCGAAACATGATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGG TCTGCTGCTGAAGGCCTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCAGCG AACTGCAAGCAATCCCAGCCATTCTTTCATTCCATACAAATTGTAGATGTACTTTAGGTC TTATAAGGTAAAAGCTCGGCTCCCCTGTAATTTTTGAGACATCGGTACAGATTGGGGATA GATACCCCTTATACATCTCAAGATACCCAGAATGGGTTAGAATCAAAAAGGTTTTTTGGA TGTAAATCCCGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTGGAACTGTTGTATTC TTTGAAATGAACAATTAGAAGTAGGAAGAGCAACTCCAAGAAGATACCATTGCTGACTTC CGTCAAGAACCTTTTTTTTTTACCTCCCCTTCATTCAGGCTGCTGGATCTATTTTCATTA TC



consensusID : consensus_12928#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1316
fasta sequence
                              [AAGGGCAGAGAGAGGCATGGAGATGGAGGCGCGAGGTGGCGGCGGGAGGTGGTACGCGGGGGGCATGTCCACCGCCGACAACATCAAGGGCCTCCTGCTCGCCCTCTCCTCCAGCCTTTTCATCGGCGCCAGCTTCATCATCAAGAAGAAGGGCCTCAAGAAGGCCGCCTCCTCCGCTCTTCGAGCCCGGGGTTGGCGGCTATTCTTATTTGTATGAGCCTCTTTGGTGGGTTGGCATGATTACAATGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTATACTTGCGCATTTTATGCTGCGTAAGAAGCTACACATATTTGGCATTCTCGGATGCATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGTCATGGTGTATATTGGTGTTTGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAAGCACTTGGTATAGCTTTGAAGTTGACCTTTTGTGGAACGAATCAACTTATATATCCACAGACATGGGCTTTTACCCTGGTTGTCCTCTCATGCATTGTCACCCAAATGAATTACTTGAACAAGGCACTTGACACCTTTAATACAGCAGTTGTATCACCAATTTATTATACCATGTTCACATCCTTAACCATACTGGCTAGTGTCATCATGTTCAAGGACTGGGACAGGCAAAATCCAACACAAATTGTGACAGAGGCGTGTGGCTTCGTAACAATCCTTTCTGGAACATTTTTGCTTCATAAAACGAAGGACATGGCCGATGGGCTTTCAACTTCATCGTCGTTCCGTCTTCCGACCTCTTCATCATTTCGTTTCTCCAAACAAACAGACGAAGAATGTGAAGGCATTCCTCTTAGATCATCAGAATCATTCCGGTCACCACCTTGATGTCCGCTTGTTGATAACTAAGCTACATGTTAGGAGGGTATGTATATACATGCATACTGTAGGAGCTAGTACTCAAAAGACGAGTCTCTTTTGGGTACAACTCATAGAGTATTTGGCTTC-AAAAAAAAAACTCAGAGTATTTAGGCCCTCACGTCACGTCTCCTGACTCGTGTGTTGTGTTGTCACGGTATATGCATATGCTTCAAGTTAAAAGGTACTAAAAAAAAA]

[+] EMBL AK073285             [AAGGGCAGAGAGAGGCATGGAGATGGAGGCGCGAGGTGGCGGCGGGAGGTGGTACGCGGGGGGCATGTCCACCGCCGACAACATCAAGGGCCTCCTGCTCGCCCTCTCCTCCAGCCTTTTCATCGGCGCCAGCTTCATCATCAAGAAGAAGGGCCTCAAGAAGGCCGCCTCCTCCGCTCTTCGAGCCCGGGGTTGGCGGCTATTCTTATTTGTATGAGCCTCTTTGGTGGGTTGGCATGATTACAATGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTATACTTGCGCATTTTATGCTGCGTAAGAAGCTACACATATTTGGCATTCTCGGATGCATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGTCATGGTGTATATTGGTGTTTGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAAGCACTTGGTATAGCTTTGAAGTTGACCTTTTGTGGAACGAATCAACTTATATATCCACAGACATGGGCTTTTACCCTGGTTGTCCTCTCATGCATTGTCACCCAAATGAATTACTTGAACAAGGCACTTGACACCTTTAATACAGCAGTTGTATCACCAATTTATTATACCATGTTCACATCCTTAACCATACTGGCTAGTGTCATCATGTTCAAGGACTGGGACAGGCAAAATCCAACACAAATTGTGACAGAGGCGTGTGGCTTCGTAACAATCCTTTCTGGAACATTTTTGCTTCATAAAACGAAGGACATGGCCGATGGGCTTTCAACTTCATCGTCGTTCCGTCTTCCGACCTCTTCATCATTTCGTTTCTCCAAACAAACAGACGAAGAATGTGAAGGCATTCCTCTTAGATCATCAGAATCATTCCGGTCACCACCTTGATGTCCGCTTGTTGATAACTAAGCTACATGTTAGGAGGGTATGTATATACATGCATACTGTAGGAGCTAGTACTCAAAAGACGAGTCTCTTTTGGGTACAACTCATAGAGTATTTGGCTTC AAAAAAAAAACTCAGAGTATTTAGGCCCTCACGTCACGTCTCCTGACTCGTGTGTTGTGTTGTCACGGTATATGCATATGCTTCAAGTT                   ]
[+] EMBL AU166558             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAAAATCCAACNCAAATTGTGACAGAGGCGTGTGGCTTCGTAACAATCCTTTCTGGAACATTTTTGCTTCATAAAACGAAGGACATGGCCGATGGGCTTTCAACTTCATCGTCGTTCCGTCTTCCGACCTCTTCATCATTTCGTTTCTCCAAACAAACAGACGAAGAATGTGAAGGCATTCCTCTTAGATCATCAGAATCATTCCGGTCACCACCTTGATGTCCGCTTGTTGATAACTAAGCTACATGTTAGGAGGGTATGTATATACATGCATACTGTAGGAGCTAGTACTCAAAAGACGAGTCTCTTTTGGGTACAACTCATAGAGTATTTGGCTTCAAAAAAAAAAACTCAGAGTATTTAGGCCCTCACGTCACGTCTCCTGACTCGTGTGTTGTGTTGTCACGGTATATGCATATGCTTCAAGTTAAAAGGTACTAAAAAAAAA]


>consensus_12928#2 AAGGGCAGAGAGAGGCATGGAGATGGAGGCGCGAGGTGGCGGCGGGAGGTGGTACGCGGG GGGCATGTCCACCGCCGACAACATCAAGGGCCTCCTGCTCGCCCTCTCCTCCAGCCTTTT CATCGGCGCCAGCTTCATCATCAAGAAGAAGGGCCTCAAGAAGGCCGCCTCCTCCGCTCT TCGAGCCCGGGGTTGGCGGCTATTCTTATTTGTATGAGCCTCTTTGGTGGGTTGGCATGA TTACAATGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGCATTTGCTCCAGCTATTT TGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTATACTTGCGCATTTTATGC TGCGTAAGAAGCTACACATATTTGGCATTCTCGGATGCATCTTATGTGTTGTGGGATCCA CCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTCAGTAACGGAAGTGTGGG ATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGTACTTGCTATGGTCGCCA TACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGTCATGGTGTATATTGGTG TTTGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAAGCACTTGGTATAGCTTTGA AGTTGACCTTTTGTGGAACGAATCAACTTATATATCCACAGACATGGGCTTTTACCCTGG TTGTCCTCTCATGCATTGTCACCCAAATGAATTACTTGAACAAGGCACTTGACACCTTTA ATACAGCAGTTGTATCACCAATTTATTATACCATGTTCACATCCTTAACCATACTGGCTA GTGTCATCATGTTCAAGGACTGGGACAGGCAAAATCCAACACAAATTGTGACAGAGGCGT GTGGCTTCGTAACAATCCTTTCTGGAACATTTTTGCTTCATAAAACGAAGGACATGGCCG ATGGGCTTTCAACTTCATCGTCGTTCCGTCTTCCGACCTCTTCATCATTTCGTTTCTCCA AACAAACAGACGAAGAATGTGAAGGCATTCCTCTTAGATCATCAGAATCATTCCGGTCAC CACCTTGATGTCCGCTTGTTGATAACTAAGCTACATGTTAGGAGGGTATGTATATACATG CATACTGTAGGAGCTAGTACTCAAAAGACGAGTCTCTTTTGGGTACAACTCATAGAGTAT TTGGCTTCAAAAAAAAAACTCAGAGTATTTAGGCCCTCACGTCACGTCTCCTGACTCGTG TGTTGTGTTGTCACGGTATATGCATATGCTTCAAGTTAAAAGGTACTAAAAAAAAA



consensusID : consensus_12928#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 499
fasta sequence
                              [CTCTCGCTTTTACCCTTCTGTCTGTTTAGTGTTTCTCTATATAGTTCATTGTCATATTGTCCATATCTCTAATTCTTCTTCAGTGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTATACTTGCGCATTTTATGCTGCGTGAGAAGCTACACATATTTGGCATTCTCGGATGCATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGTCATGGTGTATATTGGTGNNNGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAATCACTTGGTATAGCTTTGNNN]

[+] EMBL CF196947             [CTCTCGCTTTTACCCTTCTGTCTGTTTAGTGTTTCTCTATATAGTTCATTGTCATATTGTCCATATCTCTAATTCTTCTTCAGTGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTATACTTGCGCATTTTATGCTGCGTGAGAAGCTACACATATTTGGCATTCTCGGATGCATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGTCATGGTGTATATTGGTGNNNGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAATCACTTGGTATAGCTTTGNNN]


>consensus_12928#3 CTCTCGCTTTTACCCTTCTGTCTGTTTAGTGTTTCTCTATATAGTTCATTGTCATATTGT CCATATCTCTAATTCTTCTTCAGTGGTTGTTGGGGAAGTTGCAAACTTTGCAGCTTATGC ATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGTGCTAT ACTTGCGCATTTTATGCTGCGTGAGAAGCTACACATATTTGGCATTCTCGGATGCATCTT ATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATTGAGTC AGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCAGTAGT ACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACTCATGT CATGGTGTATATTGGTGNNNGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTGAAATC ACTTGGTATAGCTTTGNNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CTGTGTGACTGATCTCTCACGTTGCAGCCGCGGCCCCGCGCGGCTCCCCTCCCCCCACCG 60
consensus_12928#1      ------------------------------------------------------------
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      ACCGGCATGGCGACACCCAGAAAAACCTCCAAAATCACCGCGAAAACACCGCGCGCCACC 120
consensus_12928#1      ------------------------------------------------------------
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GTGATCTGACTGACTGATCTGATCTCTCACGTTCTAGCGGCGCACCGCGCACGCGGAC-C 179
consensus_12928#1      ----------------------------TAGTAGTAGCGGCCAAGTCCACACCGAGACAT 32
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CGCACACGCGAGAGAGCGCGCGCGCGCACGGCGATTCGGTCGTCCTCCTCCGGTTTACTA 239
consensus_12928#1      CACACAAACATCCCCGT-CGCGTGGACTCGCGAACCCCAATTCCCCTCTCCC-----CTC 86
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CTACTAGTACTTGCCACCTTC-CCGACGACGTCGCCGTCGTCGTCG-TCGGCGCGCGCGC 297
consensus_12928#1      CCACCCAACCTCGCCGTCGCCGTCGCCGTCGCCGCCGTCTCCGCCGCTCGATTTCTCCCC 146
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GCCTCTCTCTCTCTCAAAGGAGTGGACTGCGTGC-TAGTGCTAGTG--CTACAGGCTACG 354
consensus_12928#1      GCCCCCCACGCAGTCCA--GAGCGGATCGAATGCGTGGCCCTCGCCGCCCGTAGCCTACC 204
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      --GGTCGAGAAAGGCGAGGCCACCAGCAGAGAGCAAGCTGAGGGAGGAGACGGG---GCG 409
consensus_12928#1      CCGGCCCGGAACGGCGAGCGCAGCCAGTCCCTCCTCGCCGCATCCGGATCTCCGCATGCG 264
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GCCTCTCCGCCTTGCAGATCTCGCATGCGCGGGCGGAGTGGACGGCGGCGGAGGAGGCGG 469
consensus_12928#1      CCACGTCCGCGGCG-GGATCTAGCGGCGTCGCACCCCCCGGA-GGTTGTAGAAGGGTTTC 322
                                                                                   

consensus_12928#2      --------------------AAGGGCAGAGAGAGGCATGGAGATGGAGGCGCGA--GGTG 38
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CGGAGGAGGAGGGCGCAGTAGGGGA-GGCGTACG-GGCGGCGGCGGCGGCGGCATGGGCG 527
consensus_12928#1      CGGGATTTGGGGGCGCCGGGGGGTATGGCGACTGAGGCGTCCACTTCGGCGGCC--GCCG 380
                                                                                   

consensus_12928#2      GCGGCGGGAGGTGGTACGCGGGGGGCATGTCCACCGCCGACAACATCAAGGGCCTCCTGC 98
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GGGCGAGGCTGGGGAGATGGGTGGAGGGGATGTCGGCGGACAACGTCAAGGGCCTCCTGC 587
consensus_12928#1      GTGCCGGGGGCGGGAGCTGGGTGGAGGGGATGTCGGCCGACAACATCAAGGGGCTGGTGC 440
                                                                                   

consensus_12928#2      TCGCCCTCTCCTCCAGCCTTTTCATCGGCGCCAGCTTCATCATCAAGAAGAAGGGCCTCA 158
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      TGGCGCTCTCCTCCAGCCTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGCCTCA 647
consensus_12928#1      TAGCGCTCTCCTCCAGCTTCTTCATCGGCGCCAGCTTCATCGTCAAGAAGAAGGGGCTCA 500
                                                                                   

consensus_12928#2      AGAAGGCCGCCTCCTCCGCTCTTCGAGCCCGGGGTTGGCGGCTATTCTTATTTGTATGAG 218
consensus_12928#3      ---CTCTCGCTTTTACCCTTCTGTCTGTTTAGTGTTTCTCTATATAGTTCATTGTCATAT 57
consensus_12928#0      AGAAGGCCGGCGCCTCCGGCGTCCGCGCA-GGTGTTGGTGGCTACTCTTACTTGCTTGAA 706
consensus_12928#1      AGAAGGCCGGCGCCTCCGGCGTCCGCGCA-GGCGTTGGAGGTTACTCCTACTTGTATGAA 559
                              **      **    *    *    * ***      **    *  ***    * 

consensus_12928#2      CCTCTTTGGTGGGTTGGCATGATTACAATGGTTGTTGGGGAAGTTGCAAACTTTGCAGCT 278
consensus_12928#3      TGTCCATATCT--CTAATTCTTCTTCAGTGGTTGTTGGGGAAGTTGCAAACTTTGCAGCT 115
consensus_12928#0      CCATTGTGGTGGGCAGGAATGACAGCAATGATTGTTGGAGAAATCGCCAACTTCGCAGCT 766
consensus_12928#1      CCATTGTGGTGGGCTGGAATGATTACAATGATTGTTGGAGAAGTAGCTAACTTTGCAGCA 619
                             *                  ** ** ******* *** * ** ***** ***** 

consensus_12928#2      TATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGT 338
consensus_12928#3      TATGCATTTGCTCCAGCTATTTTGGTCACTCCTCTTGGTGCTCTCAGCATTATCATCAGT 175
consensus_12928#0      TATGCTTTTGCTCCTGCTATCTTGGTCACTCCACTTGGTGCACTTAGCATAATTATCAGT 826
consensus_12928#1      TATGCCTTTGCTCCTGCTATCTTAGTAACCCCACTTGGTGCGCTAAGCATCATCATCAGT 679
                       ***** ******** ***** ** ** ** ** ******** ** ***** ** ******

consensus_12928#2      GCTATACTTGCGCATTTTATGCTGCGTAAGAAGCTACACATATTTGGCATTCTCGGATGC 398
consensus_12928#3      GCTATACTTGCGCATTTTATGCTGCGTGAGAAGCTACACATATTTGGCATTCTCGGATGC 235
consensus_12928#0      GCTGTTCTTGCACACATTATTCTGAGAGAGAAGCTACACATATTTGGTATACTCGGGTGT 886
consensus_12928#1      GCTGTTCTTGCAGATATTATGTTGAAGGAGAAGCTTCACATATTTGGTATACTTGGTTGT 739
                       *** * *****  *  ****  **    ******* *********** ** ** ** ** 

consensus_12928#2      ATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATT 458
consensus_12928#3      ATCTTATGTGTTGTGGGATCCACCACAATTGTCCTTCATGCCCCCGCGGAGCGTGAGATT 295
consensus_12928#0      ATTCTTTGTGTTGTGGGTTCGACAAGTATTGTGCTTCATGCCCCTCCAGAGCGTCAAATT 946
consensus_12928#1      GTCCTCTGTGTTGTGGGTTCAACAACCATTGTGCTTCATGCGCCGCAGGAGCGTGAAATT 799
                        *  * *********** ** ** *  ***** ******** **    ****** * ***

consensus_12928#2      GAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCA 518
consensus_12928#3      GAGTCAGTAACGGAAGTGTGGGATTTGGCTACTGAACCAGCCTTCATGTTCTATGTTTCA 355
consensus_12928#0      GAGTCTGTGGCAGAAGTATGGGATCTAGCTACTGAACCAGCATTTCTACTATATGCAGCC 1006
consensus_12928#1      GATTCTGTAGCTGAAGTGTGGGCTCTTGCTACTGAACCAGCCTTTCTATTTTATGCAGTC 859
                       ** ** **  * ***** **** * * ************** **  *  * ****     

consensus_12928#2      GTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACT 578
consensus_12928#3      GTAGTACTTGCTATGGTCGCCATACTTGTTTGCCGATTTGTCCCACTTTACGGGCAAACT 415
consensus_12928#0      ATTGTGCTTGCAGCAGCTTTTGTGCTCATATTCCATTTTGTCCCACAATATGGTCAGACC 1066
consensus_12928#1      ACTGTGCTTGCTGCGACTTTTGTGCTCATATTCCGCTTTATCCCCCAATATGGTCAGACA 919
                          ** *****           * **  * * **  *** **** *  ** ** ** ** 

consensus_12928#2      CATGTCATGGTGTATATTGGTGTTTGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTG 638
consensus_12928#3      CATGTCATGGTGTATATTGGTGNNNGCTCTCTTGTAGGCTCTATCTCGGTTATGAGTGTG 475
consensus_12928#0      CATATCATGGTGTATATTGGTGTCTGTTCTCTCGTGGGATCCTTATCGGTCATGAGTGTC 1126
consensus_12928#1      CACATTATGGTGTATATTGGTGTTTGTTCTCTTGTAGGGTCTCTCTCGGTCATGAGTGTG 979
                       **  * ****************   * ***** ** ** **  * ***** ******** 

consensus_12928#2      AAAGCACTTGGTATAGCTTTGAAGTTGACCTTTTGTGGAACGAATCAACTTATATATCCA 698
consensus_12928#3      AAATCACTTGGTATAGCTTTGNNN------------------------------------ 499
consensus_12928#0      AAAGCTCTTGGGATAGCATTGAAGCTGACATTTTCAGGGATGAACCAGCTTGTTTATCCA 1186
consensus_12928#1      AAAGCACTTGGAATAGCCTTGAAACTGAC-TTTTCAGGAATGAACCAGCTAATCTATCCA 1038
                       *** * ***** ***** ***                                       

consensus_12928#2      CAGACATGGGCTTTTACCCTGGTTGTCCTCTCATGCATTGTCACCCAAATGAATTACTTG 758
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CAGATGTGGGTGTTCTTACTTTTTGTAGTTGCATGCATAGTAACACAGATGAACTATCTG 1246
consensus_12928#1      CAGACATGGATGTTCACCATTGTTGTTGTTGCATGTATACTAACTCAGATGAACTATCTA 1098
                                                                                   

consensus_12928#2      AACAAGGCACTTGACACCTTTAATACAGCAGTTGTATCACCAATTTATTATACCATGTTC 818
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      AACAAGGCCCTTGACACTTTCAACACTGCAGTGGTTTCGCCCATATATTATACGATGTTT 1306
consensus_12928#1      AACAAGGCTCTTGACACATTCAATACTGCAGTTGTTTCGCCTATATATTATACAATGTTT 1158
                                                                                   

consensus_12928#2      ACATCCTTAACCATACTGGCTAGTGTCATCATGTTCAAGGACTGGGACAGGCAAAATCCA 878
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      ACATCCTTGACCATTTTGGCCAGTGTGATAATGTTCAAGGACTGGGATCGTCAAGATCCA 1366
consensus_12928#1      ACATCACTAACCATTTTGGCTAGTGTGATAATGTTCAAGGACTGGGATCGTCAAAATCCA 1218
                                                                                   

consensus_12928#2      ACACAAATTGTGACAGAGGCGTGTGGCTTCGTAACAATCCTTTCTGGAACATTTTTGCTT 938
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      ACACAAATTGTCACGGAGATGTGCGGTTTTGTTACAATCCTTTCTGGGACATTTCTTCTT 1426
consensus_12928#1      ACTCAAATTGTGACAGAGATGTGTGGTTTTGTTACCATCCTTTCTGGGACGTTTCTTCTT 1278
                                                                                   

consensus_12928#2      CATAAAACGAAGGACATGGCCGATGGGCTTTCAACTTCATCGTCGTTCCGTCTTCCGACC 998
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CACAAGACAAAGGATATGGTGGATGGTCTCCCACCAAATTTACCTATCCGACTACCTAAA 1486
consensus_12928#1      CACAAGACGAAAGATATGGTCGATGGACTCCCACCAACTCTACCTATCCGAATACCGAAA 1338
                                                                                   

consensus_12928#2      TCTTC--------ATCATTTCGTTTCTCCAAACAAACAGACGAAGAATG----TGAAGGC 1046
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CACGCCGAGGAGGATGGTTATGCTGCTGAAGGAATTCCTCTCAGATCTGCTGCTGATGGC 1546
consensus_12928#1      CATG---ATGAAGATGGCTATGCGGCTGAAGGCATCCCCCTCAGGTCTGCTGCTGAAGGC 1395
                                                                                   

consensus_12928#2      ATTCCTCTTAGATCATCAGAATCATTCCGGTCACCACCTTGATGTCC---GCTTGTTGAT 1103
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      ATTCCACTCAGGTCACCGAGGGCCACGGAATCGTTTCGTGCGACATTATAACCTGCTAAT 1606
consensus_12928#1      CTCCCTCTTAGGTCACCAAGAGCAGCAGAATGATTTTGACCAGCG-----AACTGCAAGC 1450
                                                                                   

consensus_12928#2      AACTA-AGCTACATGTTAGGAGGGTATGTATATACATGCATACTGTAGGAGCT--AGTAC 1160
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GCTTGCAACCGTGCTTCAAG---GTTTATACTCCAGCAGCAACGCTAGCTCCTCAATGTG 1663
consensus_12928#1      AATCCCAGCCATTCTTTCATTCCATACAAATTGTAGATGTA-CTTTAGGTCTT--ATAAG 1507
                                                                                   

consensus_12928#2      TCAAAAGACGAGTCTCTTTTG-GGTACAACTCATAGAGTATTTGGCTTCAAAAAAAAAAC 1219
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GGAAGGGAAGAATCTCCATTCTTTCATTGGATACACACTCCATAGGTTGACTGTAGGATC 1723
consensus_12928#1      GTAAAAGCTCGG-CTCCCCTGTAATTTTTGAGACAT-CGGTACAGATTGGGGATAGATAC 1565
                                                                                   

consensus_12928#2      TCAGAGTA----TTTAGGCCCTCACGTCACGTCTCCTGACTCGTGTGTTGTGTTGTCACG 1275
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CAAAGGTAACGGCTCGGCCCCCCCTGTAATTTTTTCAGACATCCGTACAAAATTTTGGGG 1783
consensus_12928#1      CCCTTATA-CATCTCAAGATACCCAGAA--TGGGTTAGA-ATCAAAAAGGTTTTTTGGAT 1621
                                                                                   

consensus_12928#2      GTATATGCATATGCTTCAAGTTAAAAGGTACTAAAAAAAAA------------------- 1316
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      GTCATTACATCAGTTATTATAC-ATATCTTCGGGTGAGATAACCAGGATGGCCAAGAATC 1842
consensus_12928#1      GTAAATCC-CGGGTGATGGTCTGATAGATGCATATGCCGTTCTTTGGA-ACTGTTGTATT 1679
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      CCAAGTTCTGAACTGTAAATCGCTGTGAGCCATAGAGGTCATTGGTCTGGAACTGTTGTA 1902
consensus_12928#1      CTTTGAAATGAACAATTAGAAGTAGGAAG--AGCAACTCCAAGAAGATACCATTGCTGAC 1737
                                                                                   

consensus_12928#2      ------------------------------------------------------------
consensus_12928#3      ------------------------------------------------------------
consensus_12928#0      TTCTTTCAAATACAATAGGCAAATAGCTCACTCATAATACAAGAAG--AGGTTAAGAGCC 1960
consensus_12928#1      TTCCGTCAAGAACCTTTTTTTTTTACCTC-CCCTTCATTCAGGCTGCTGGATCTATTTTC 1796
                                                                                   

consensus_12928#2      -------
consensus_12928#3      -------
consensus_12928#0      AACAANA 1967
consensus_12928#1      ATTATC- 1802
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)