cluster # 12930

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Oryza sativa
cluster # 12930 cluster # 12930 Sequences # 11 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12930#0 length = 818 sequences # 11
consensusID : consensus_12930#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 818
fasta sequence
                              [AGTGAAATTTCTTTTTCCACTGTAAGGCTAAGTTTATTTCAATTGGATCATATG-CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATCTCGATCGA--------TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT-CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC-AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT-GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCATCTATGTTGAGTGCTTCTGTACAGCTACTTATAGCCTCC]

[-] EMBL AA751547             [AGTGAAACAGCTAGCTCCACTGTAAGGCTAAGTTTATTTCAATTGGATCATATG CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATNTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAANTCCACAGGCAGTAAACTTTNTATCCAAAGTTGAANTGAAAGCCTGCAGGAAANCCGCCCCCGGGG NTCCTggacng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU100717             [       TTTTTTTTTCCACTGTAAGGCTAAGTTTATTTCAATTGGATCATATG CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATCTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGGTTTTC AG TCTCATTAGTGCTTCTCGGATTCCCATGTCCTGGGGGAGA TTCTNGGNAG CTCTTTTAGAT                                                                                                                    ]
[+] EMBL CB629037             [       TTTCTGTATATTTTGTAAGGCTAAGTTTATTTCAATTGGATCATCTG CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATCTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAAGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAAAAACTTAGCTTCACCTCTCTGTG                                                              ]
[-] EMBL AU069420             [         ttTTTTTCCACAGTAAGGCTCAGTTTATTTCGATTGGATCATATG CGTCAGAAAATCCCAAGGAAGGATACAACTTAAGGAAAATTTGATGGTGCTT AAACAACACTTGTATACGATTCTCATCTTGATCGATCGGTCGGTCGGCCTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTA    AAACAAACAAACATACAAACTCCAACTCCACAGACAGT AACTTTCTATCCAAAGTTGAACTGAAATCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATAGAATCCACCATCGTAATGGAATGTGTATTGCTGACCACCTCCCCCAAAAGGATTGAAACCACCA   CCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCATCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGGTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATATCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTCAAGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGAAGCTTCTTT                                                                                                                         ]
[+] EMBL CB681305             [                CCACTGTAAGGCTAAGTTTACCTTTATTGGATCATATG CGTCAAAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAACCAACACTTGTATACGATGCTCATCTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGT                                                             ]
[+] EMBL CB629038             [                     GTAAGGCTAAGTTTATTTCAATTGGATCATATG CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATCTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCATCTATGTTGAGTGCTTCTGTACAGCTACTTATAGCCT  ]
[+] EMBL CB660237             [                        AGGCTAAGTTTATTTCAATTGGATCATATG CGTCAGAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCATCTCGATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGAGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCATCTATGTTGAGTGCTTCTGTACAGCTACTTATAGCCTCC]
[+] EMBL CB621892             [                             tctTTTTTTTCGATTGGATCATATG CGTCAGAAAATCCCACCGTAGGATACAACTTAAGGAAAATTTGATGGTGCTT AAACAACACTTGTATACGATTCTCATCTTGATCGATCGGTCGGTCGGCCTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTA    AAACAAACAAACATACAAACTCCAACTCCACAGACAGT AACTTTCTATCCAAAGTTGAACTGAAATCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGACCACCTCCCCCAAAAGGATTGAAACCACCA   CCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCATCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGGTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATATCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGAAGCTTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCATCTATGTTGAGTGCTTCTGTACAGCTACTGATAGCCT  ]
[+] EMBL CB660278             [                                      TCAATTGGATCATATGCCGTCCTAAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGTATACGATGCTCCTCTCAATCGA        TCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAACTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGAGAATCCTCCTCCTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGATTGAAACCACCACCTCCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCATCTATGTTGAGTGCTTCTGT                   ]
[-] EMBL AU092381             [                                                                      tttttGGATACAACTTAAGGAAAATTTGATGGTGCTT AAACAACACTTGTATACGATTCTCATCTTGATCGATCGGTCGGTCGGCCTGACTGCCTACAATCAATACCTGTTGTTAAGCTTATCAGCGTTCCTA    AAACAAACAAACATACAAACTCCAACTCCACAGACAGT AACTTTCTATCCAAAGTTGAACTGAAATCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTCCTCCATAGAATCCACCATCGTAATGGAATGTGTATTGCTGACCACCTCCCCCAAAAGGATTGAAACCACCA   CCT CCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGTATCTTACACGTTTATCTTCATCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGGTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATATCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTNTCTTTTGCTTAACTTAAGCNGCTTTTC AGCTCTCATTAGTGNTTCTCGGATTCCCATGTCCTGGGGGAGATTTCTGGGAAGCTTCTTT                                                                                                                         ]
[-] EMBL C26396               [                                                                                                                                                                                                                                                                                                                                                                                         CCACCTCCTNCCTCCTCCCATATTCATCTCATCAAGA CCTCTCCTCGGCCGTATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACATGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACTTCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTATACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTC AGCTCTCATTAGTGCTTCTCGGATTCCCATGTCCT GGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCCAGTCTTCTGTAAGAAGCT                                                                                ]




>consensus_12930#0
AGTGAAATTTCTTTTTCCACTGTAAGGCTAAGTTTATTTCAATTGGATCATATGCGTCAG
AAAATCCCAAGGAAGGATACAACTTGAGGAAAATTTGATGGTGCTTAAAACAACACTTGT
ATACGATGCTCATCTCGATCGATCGGCTTGACTGCCTACAATCAATACCTGTTGTTAAGC
TTATCAGCGTTCCTAAAACAAACAAACAAACATACAAACACCAACTCCACAGGCAGTAAA
CTTTCTATCCAAAGTTGAACTGAAAGCCTCCAGGAAAGCCGCCCCCGGGGAATCCTCCTC
CTCCATGGAATCCACCATCGTAATGGAATGTGTATTGCTGGCCACCTCCCCCAAAAGGAT
TGAAACCACCACCTCCTCCTCCTCCCATATTCATCTCATCAAGATCCTCTCCTCGGTCGT
ATCTTACACGTTTATCTTCGTCCCCAAGAACCTCATAAGCTGCAGCAATTTCTCGAAACA
TGTTTTCTGCTTCTTCTCGCTTATCTACATTTTTATCTGGATGCCACTGCAGTGCCAACT
TCTTGTAGGCACGCTTAATCTCTGCAGCTGATGCCGTCTTTGAAATGCCAAGGATCTTAT
ACCAATCTTTTCTTTTGCTTAACTTAAGCTGCTTTTCAGCTCTCATTAGTGCTTCTCGGA
TTCCCATGTCCTGGGGAGATTTCTGGGCAGCCTCTTTTAGATCCTGAACCGCTCCTTCCC
AGTCTTCTGTAAGAAGCTTAGCTTCACCTCTCTGTGTTAATGCATCAACAAGTTCTCCAT
CTATGTTGAGTGCTTCTGTACAGCTACTTATAGCCTCC
clustalw multiple alignements is not computed in this case