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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12933#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 977 fasta sequence
[AACAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC-GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA-CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC-GACGC-GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG-CCGACGTGCTCCTCCTC-TCCG-ACGGCAACCTGGAGCTCAC-G-CG-CGCGCT-CGGC-GTCGA-----GATGGACCTCTCCGACAAGCCCATGGGGCT-C-GGC-GTCA-GGTC-GCG-CC-GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA-AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAAAAAAAAAACCATGTGTTTGACGAAATGTCGAGATATGAAAGCTGTGAAATCGCTTACGT]
[+] EMBL AK065909 [AACAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAA ]
[+] EMBL AK061629 [ CAGAGAAGCATTTCCTCGAACACATCGCCGTCGCCGCCCTCCATGGCCGCTCCCACCGCAGCAGCTCTCTCCACCCTCTCCACCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATTGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAATTTGCAAACCATGTGTTTGACGAAATGTCGAGATATGAAAGCTGTGAAATCGCTTACGT]
[+] EMBL AA754428 [ cgagatthnCCNCGAACACATCGCCGTCGCCGCCCTCCATGGCCGNTHCCACCGCAGCAGCTCTCTCCACCCTCTCCGCCGCCAGCGTCACCTCCGGCAAGCGCTTCATCACCTCCTCCTTCTCCCTCTCCTTCTCCTCCCGCCCCCTCGCAACAGGCGTCCGCGCCGC GGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGSTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGA STGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACG CGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTYGGCGACG CCACCGTTCT ]
[+] EMBL BE230249 [ GGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGAGNGGGGATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GTTACTCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCT ]
[+] EMBL BE230554 [ GGCGTCCGCGCCGCGGGGGCGAGAGCGGCGCGGAGGTCGGCGGCGTCGGCGTCCACCGTGGTGGCGACCATCGCCGTCGGAGACAAGCTCCCCGACGCGACGCTGTCCTACTTCGACCCGGCGGACGGCGAGCTGAAGACGGTGACGGTGGCGGAGCTGACGGCGGGCAGGAAGGCGGTGCTGTTCGCGGTGCCCGGCGC GTTCACGCCGACGTGCTCGCAGAAGCACCTCCCGGGGTTCATCGAGAAGGCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAAGAGAGCCTGGGCCTCGGCGACG CCGACG ]
[+] EMBL BM038665 [ CTGAC GC GGCAGGAA GCGGT CTGTTCGCGGTNCCCGGCGCTGTTCAC CCGACGTGCTCGCAGAAGCACCTCC GGGTTCATCGAGAA GCCGGGGAGCTCCA CGCCAAGGGGGTGGACGCCATCGCCTGCGT TCGGTGAAC GACGCAGTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGCAGTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CCAGCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCAT CCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTT TTTTTTT AAAAAAAAAAA ]
[+] EMBL BM419893 [ CGGGGTTCATCGAGAA GCCGGGGAGCTCCACCGCCAA GGGGT GACGCCATCGCCTGCGTGTCGGTGAAC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACN CCGACGTGCTCCTCCTCTTCCGTACGGCAACCTGGAGCTCACAG CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT CAGGCAGTCA GGTCTGCGTCC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAAC AAAGAAACAAAACTACTTTT TTTTTTGTTTGAAAAAAAA ]
[+] EMBL BQ908123 [ TCGCCTGCGTGTCGGTGAACNGACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCTGGGCCTCGGCGACGNCCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCT C GGC GTCA GGTC GCG CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAGGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACCAAAGAAAAAAAACTACTTTT TTTTTTTGTTGAAAAAAAAAA ]
[+] EMBL BI805097 [ TGTCGGTG AC GACGC GTTCGTGATGCGCGCGTGGAAGGAGAGCCT GGCCTCGGCGACG CCGACGTGCTCCTCCTC TCCG ACGGCAACCTGGAGCTCAC G CG CGCGCT CGGC GTCGA GATGGACCTCTCCGACCAGCCCCTGGGGCT C GGC GTCACGGTC GCC CC GCTACGCGCTCCTCGCCGACGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACCATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACCAAAGAAAAAAAACTACTTTTATTTTTTTGTTGAAAAAAAAAc ]
[+] EMBL AU075540 [ gaagntTCAC GTCGACGCGCTNCGGC GTCGA GATGGACCTCTCCGACAAGCCCATGGGGCTNC GGC GTCA GGTC G C GCTACGCGCTCCTCGCCGANGACGGCGTCGTCA AGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTGACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTTAaa ]
[+] EMBL AU070372 [ tGTCANAGGTGCTCAACCTCGAGGAGGGCGGCG CTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGATGGAATCCGAGCTCTCGTAGGTGGCAACAATGGCAGGATCAGCCCGTTGCTCTCGCGCGTTGGTGAGTAGCGTCGTCGTTGTGAAGAGGAAATTTTGTGTGTGTTTTTTTTCGGTTGAATGTTGCATGCCATGTGCTTNACGAAATGACGGAATAACAAAAGAAAAAAAACTACTTTNATTTTTTTGTTGAAAAAAAAAAAaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||