cluster # 12941

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Oryza sativa
cluster # 12941 cluster # 12941 Sequences # 11 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12941#0 length = 1737 sequences # 1
consensus_12941#1 length = 1613 sequences # 7

consensus_12941#2 length = 772 sequences # 2
consensus_12941#3 length = 203 sequences # 1

consensusID : consensus_12941#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1737
fasta sequence

                              [TAAACCCACAATATACAACCCAAGATACCCGGACACATTTACAGAAATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTGGCAATTTCACATTTGAAGTTATTTCTGGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCGTGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTCGTCATGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGAGC]

[+] EMBL AK060214             [TAAACCCACAATATACAACCCAAGATACCCGGACACATTTACAGAAATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTGGCAATTTCACATTTGAAGTTATTTCTGGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCGTGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTCGTCATGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGAGC]




>consensus_12941#0
TAAACCCACAATATACAACCCAAGATACCCGGACACATTTACAGAAATGCCCCCCAAACT
CCTCACTTATCTCATCCTAGCCCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGG
GTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGC
TTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCG
TGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACAT
TCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCAT
GGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGC
ATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGA
ATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATC
CAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTG
ATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATT
CTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAAC
TTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGT
GCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTG
CAGAGAACCGTTAGATGTTACTGGCAATTTCACATTTGAAGTTATTTCTGGAAGTATATA
CAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTA
CAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATT
GGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAA
CCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCA
GATGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAG
ATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTAC
TTGGTGGAGAGGTTTGCGTGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGA
TATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTG
CCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATC
ACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTC
CTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGG
TATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTG
TACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAA
ATTTTATAGTCCCTCGTCATGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGAGC

consensusID : consensus_12941#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1613
fasta sequence

                              [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCTGATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACC-AAGGTGTATGGTACCTTGATCATC-TTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTCGTCAAGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGA]

[+] EMBL AK069009             [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCTGATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACC AAGGTGTATGGTACCTTGATCATC TTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTCGTCATGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGA]
[+] EMBL CB637830             [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCAGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTCCGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAAAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB627890             [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCTCGCAACGCCTCGGGTGGGTACGACGTAGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF322683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCTGATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACC AAGGTGTATGGTACCTTGAT ATCNTNGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB661113             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACC AAGGTGTATGGTACCTTGATCATC TTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATAACGTTACCTATCACACGGAT                                                                    ]
[-] EMBL CB637849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ATGAGTAACCAAAGGTGTATGGTACTTTGATCATC TTGATGTTCCCTGGCAAGATTTTTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACTTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTTTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTAAT AAGTATTTTCGC                         ]
[+] EMBL BE040462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATGGCCAGGAGCGGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGGCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTGTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCCTCGTCAAaaaaaa                             ]




>consensus_12941#1
GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCC
TCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTG
GAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCG
ATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAG
ACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCC
CCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCA
AGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAG
CTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCA
TATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCA
CGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTG
CCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGC
AGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCT
GATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACA
GGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACA
AAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGG
ATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACC
GTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGA
TGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGAT
TTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTT
GGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATA
TGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCC
CAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCAC
CGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCT
GGTTCATGCTTCATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTA
TTTGCCTCCATACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTA
CTGTTTCTGTATGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAAT
TTTATAGTCCCTCGTCAAGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGA

consensusID : consensus_12941#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 772
fasta sequence

                              [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTNTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGTAGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATGCTTATTTCCAATTACATATATTTTCTTTCATCTAGCTGGGTGTAGTATCGTTCTATTTTAGTTGGAAG]

[+] EMBL CB638154             [GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTNTGCTTTTCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF306698             [                                                                                                                                                                                                            GCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGTAGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATGCTTATTTCCAATTACATATATTTTCTTTCATCTAGCTGGGTGTAGTATCGTTCTATTTTAGTTGGAAG]




>consensus_12941#2
GCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCC
TCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTG
GAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCG
ATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAG
ACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCC
CCATGGTACATTGAAGACGAACCACGCTNTGCTTTTCGTGGGTTGCTCCTTGACACATCA
AGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAG
CTGTAGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCA
TCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGAT
GCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCT
TTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGT
CTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATGCTTATTTCCAATTACA
TATATTTTCTTTCATCTAGCTGGGTGTAGTATCGTTCTATTTTAGTTGGAAG

consensusID : consensus_12941#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 203
fasta sequence

                              [GCACATTTACAGAAATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCGCCTCCGCCGCCGCAGCGCGGCGCCACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGCCCGTCTACCTATGGCCGCTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCGACCCTGACCTCGCGCTCGACGGC]

[+] EMBL CB637848             [GCACATTTACAGAAATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCGCCTCCGCCGCCGCAGCGCGGCGCCACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGCCCGTCTACCTATGGCCGCTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCGACCCTGACCTCGCGCTCGACGGC]




>consensus_12941#3
GCACATTTACAGAAATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCG
CCTCCGCCGCCGCAGCGCGGCGCCACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGC
CCGTCTACCTATGGCCGCTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCG
ACCCTGACCTCGCGCTCGACGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12941#1      -------------------------------------------------------GCGTT 5
consensus_12941#2      -------------------------------------------------------GCGTT 5
consensus_12941#0      TAAACCCACAATATACAACCCAAGATACCCGGACACATTTACAGAAATGCCCCCCAAACT 60
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      CGAGAGGTA-CAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGG 64
consensus_12941#2      CGAGAGGTA-CAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGG 64
consensus_12941#0      CCTCACTTATCTCATCCTAGCCCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGG 120
consensus_12941#3      -------------------------------------GCACATTTACAGAAATGCCCCCC 23
                                                            ****       * ** *** *  

consensus_12941#1      GTGGGTACGACGTCGGGAAGCTCA-CCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAG 123
consensus_12941#2      GTGGGTACGACGTCGGGAAGCTCA-CCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAG 123
consensus_12941#0      GTGGGTACGACGTCGGGAAGCTCA-CCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAG 179
consensus_12941#3      AAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCGCCTCCGCCG--------CCGCAG 75
                                ** *     * *  * ** ** *** ***********        * * **

consensus_12941#1      CTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATC 183
consensus_12941#2      CTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATC 183
consensus_12941#0      CTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATC 239
consensus_12941#3      CGCGGCGCC-ACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGCCCGTCTACCTA--- 131
                       *  ** *   **  *       *** **  * *** ** * **    **** *       

consensus_12941#1      GTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAG---CTATTCGTGGATTAGAG 240
consensus_12941#2      GTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAG---CTATTCGTGGATTAGAG 240
consensus_12941#0      GTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAG---CTATTCGTGGATTAGAG 296
consensus_12941#3      -TGGCCG---CTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCGACCCTGA 187
                        ***  *   *  **   **   * **  *   *     *   **  * ** **      

consensus_12941#1      ACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCC 300
consensus_12941#2      ACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCC 300
consensus_12941#0      ACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCC 356
consensus_12941#3      CCTCGCGCTCGACGGC-------------------------------------------- 203
                        *   *  ** *  *                                             

consensus_12941#1      CCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCA 360
consensus_12941#2      CCATGGTACATTGAAGACGAACCACGCTNTGCTTTTCGTGGGTTGCTCCTTGACACATCA 360
consensus_12941#0      CCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCA 416
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      AGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAG 420
consensus_12941#2      AGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAG 420
consensus_12941#0      AGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAG 476
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      CTG---AATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCA 477
consensus_12941#2      CTGTAGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCA 480
consensus_12941#0      CTG---AATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCA 533
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGAT 537
consensus_12941#2      TCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGAT 540
consensus_12941#0      TCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGAT 593
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      GCACGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGAC 597
consensus_12941#2      GCACGTGATATTGTCAGGTAT--------------CAAGTTTATCAT--TTGCCTTTCGC 584
consensus_12941#0      GCACGTGATATTGTCAGGTAT--------------CAAGTTTATCAT--TTGCCTTTCGC 637
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      GTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAG 657
consensus_12941#2      ATTCTC-----TGTATCTTCTTT---------ATATTCTATTGCCAAGTTCTTTC---AG 627
consensus_12941#0      ATTCTC-----TGTATCTTCTTT---------ATATTCTATTGCCAAGTTCTTTC---AG 680
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTG 717
consensus_12941#2      TTCAC----TTATAAAAGGTGTTCTCTGATTTCACGTCTGAA---ACTTCCCGACTCTAA 680
consensus_12941#0      TTCAC----TTATAAAAGGTGTTCTCTGATTTCACGTCTGAA---ACTTCCCGACTCTAA 733
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TCTGATATGAGAAAAATCTTTCC------------------------ATTTGGGC----- 748
consensus_12941#2      AGCTATGCTAGGAAAAGAGGTAT------------------------GCTTA-------- 708
consensus_12941#0      AGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCA 793
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      ------------------------------------TCTTCCAC-------------TTG 759
consensus_12941#2      -------------------------------------TTTCCAA-------------TTA 718
consensus_12941#0      GAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTA 853
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      GGTGGTGATG----------------------------AAGTATATACAGGTTGCTGGAA 791
consensus_12941#2      CATA-TATTT----------------------------TCTTTCATCTAGCTGGGTGTA- 748
consensus_12941#0      GATGTTACTGGCAATTTCACATTTGAAGTTATTTCTGGAAGTATATACAGGTTGCTGGAA 913
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTA 851
consensus_12941#2      -GTATCGTTCTATTTTAGTTGGAAG----------------------------------- 772
consensus_12941#0      TGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTA 973
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      CAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAA 911
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      CAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAA 1033
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAA 971
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAA 1093
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      CTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAG 1031
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      CTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAG 1153
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAG 1091
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAG 1213
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGT 1151
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGT 1273
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGC 1211
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TTGCGTGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGC 1333
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      AGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGA 1271
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      AGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGA 1393
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      AACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGC 1331
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      AACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGC 1453
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTT 1391
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTT 1513
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      CATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCAT 1451
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      CATTCAGTAAACAGGGAGCTGCAGAGCAAAGATAGGCATAAGAGGGGTATTTGCCTCCAT 1573
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      ACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTA 1511
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      ACACCTTCCACACTTCAGACAAAAATGGTATCTTGTCAATTTTAGTGTACTGTTTCTGTA 1633
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCC 1571
consensus_12941#2      ------------------------------------------------------------
consensus_12941#0      TGTTTGTTTGCATTACATTACCTATCACACGGATGTTTGACAATAAAATTTTATAGTCCC 1693
consensus_12941#3      ------------------------------------------------------------
                                                                                   

consensus_12941#1      TCGTCAAGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGA-- 1613
consensus_12941#2      --------------------------------------------
consensus_12941#0      TCGTCATGTATTTTCGCCCTAAGTTTCAAATAAAACTGCAGAGC 1737
consensus_12941#3      --------------------------------------------